ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7546914 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◣ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Txndc11
Znrf1
A930007A09Rik
Slc25a4
Etfbkmt
Frmpd1
Frem2
Pabpc1
Wrap53
Trp53
Letmd1
Mup4
Slc15a1
Wsb2
Urm1
Cldn34d
Gatad2a
Setd5
Prdm4
Ascl4
Vezt
Fgd6
Ncdn
AU040320
Acp5
Bmerb1
Ifitm7
Gja1
Zcrb1
Pphln1
Cd37
Slc6a16
Gm29733
Nedd4l
Asxl1
Eno1
Tmem181a
Zfp410
Chka
Mcl1
Rheb
Trim72
Cd38
Atrn
Kif17
Spata24
Prob1
Lama1
Prkag1
Zfp428
Scn5a
Gid4
Apbb2
Epha1
Hook2
Man2a2
Colec12
Coro2a
Nphp3
Pacsin2
Rnf114
Rcor2
Dhx32
Rassf8
Wdr59
Terf2
Setd1b
Rhof
D630039A03Rik
Sfxn2
Arl3
Uqcr11
Mbd3
H3f3a
Exoc6b
Zfp710
Timp4
Zfp964
Smc6
Gen1
Rragc
Atxn3
Ywhae
Mios
Defb5
Defb46
Epha2
Tagln3
Rnf213
Hnrnpdl
Enoph1
Mpig6b
Ly6g6c
Ddah2
Clic1
Otx2
Tmed7
Eif1a
Ubr5
Nwd1
LTO1
Arfgef1
Tulp4
Lifr
Ino80
Ufsp1
Ache
Donson
Cd9
Pum3
Rif1
Dynll2
Abl1
B3gnt7
Mtcl1
Llgl2
Fahd2a
Prkci
Hinfp
C2cd2l
Lypla1
Tmprss12
Abcc4
Radil
Gm4861
Stmn1
Slc7a7
Prelid3a
Hoxb13
Prnp
Prn
Sox1
Bcl10
Ubr1
Tmem62
Dnttip2
Myo10
Klf5
Fgd1
Rnf125
Tet1
Slc37a3
Rab19
Ndufa4l2
Stac3
Fcgr3
Ptprz1
Lrrc8b
D5Ertd579e
Rybp
Hoxa2
Pou2f2
Ift140
Cramp1l
Notch2
Flywch1
Polg2
Ddx5
Cep95
Mrc2
Trim25
Ccdc30
Zmynd12
Ppcs
Ddx20
G2e3
Togaram1
Klhl28
Mllt1
Rab37
Slc9a3r1
Thpo
Polr2h
Clcn2
Chrd
Arl2
Qpct
Tmem131l
E030030I06Rik
Adnp2
Ndrg1
Atg5
Dhrs7b
B3gnt4
Adgra2
Pef1
Zscan10
Zfp13
Chd1
Slc26a8
Mapk14
Med12l
Prkar1a
Rpp14
Htd2
Gpr162
Slc9a1
Mrps15
Mycn
Parp6
H3c3
H2bc3
H1f2
Tdrd3
Olfr90
Hic1
Ovca2
Apc
Smim8
Tprn
Tmem203
Ssna1
Ndor1
Anapc2
Slc25a22
Rplp2
Pidd1
Cend1
Lax1
Sptb
Spef1
Cenpb
Cdc25b
Pvr
Tbx3
Sbk1
Col26a1
Zfand6
Ptch2
Gne
Parp12
Shoc2
Bbip1
Ptpra
D030056L22Rik
Coq2
Tfeb
Vrk1
Tbc1d9
Grhl3
Macroh2a1
Atoh1
Olfr1339
Rab4a
Snx15
Sac3d1
Mettl21a
Tbc1d5
Tlx2
Pcgf1
Lbx2
Gsx1
Dnmt3a
Def6
Ppp2r3a
Trappc5
Mcemp1
Fcor
Mab21l1
Sbk3
Sbk2
Cdkn2aip
Usp37
Cnot9
App
Soga3
Mllt6
Snn
Agtrap
Gipc1
Ptger1
Slc31a1
Fkbp15
Lef1
R3hdm2
Inhbc
Cmas
Mreg
Smad6
Rnf122
Ceacam13
Dcaf11
Cd300lg
Zfp9
Sh3rf1
Pdp2
Nodal
Ppp2ca
Pcif1
Unc5b
Chrac1
Zdhhc2
Fbrsl1
Ect2l
Glrx2
Enpp4
Zfp532
Zdhhc6
Vti1a
Rest
Ccdc9
Serpini1
Pdcd10
Rps10
Sclt1
D3Ertd751e
Kcnj4
Fbxo5
Nefh
Ap1b1
Cds1
Hsdl1
Dnaaf1
Prrc2b
Mrpl23
Ralb
Hmgxb4
Glra1
Tmco4
Rnf186
Ccn2
Bnip3l
Grb2
Rrp36
Mea1
Klhdc3
Faiml
Cep70
Glis2
Cbll1
Dgkd
Ubc
Dlc1
Snrpg
Fam136a
Znfx1
Zbtb45
Trim28
Pdcd2
Wbp11
Smco3
BC049715
Ano10
Trmt61a
Ckb
Asap2
Lpgat1
Hmga1b
Hmga1
AI413582
Tmem170b
Coa4
Nkx2-6
Cdc16
Golm2
Spag4
Isl1
Abl2
Pcgf6
Mterf1a
Zhx1
Gdap1
Scaf11
Fam227b
Dtwd1
Usp5
Cdca3
Epha4
Slc12a4
8030462N17Rik
Mib2
Tmeff1
Zfp36
Plekhg2
Gzme
Dyrk4
Ido1
H2az2
Gpld1
Aldh5a1
Zfp513
Snx17
Eif2b4
Nutm2
Cldn14
Racgap1
Mup6
Il17rd
Ints9
Hmbox1
Cecr2
Lsmem2
Ifrd2
Fubp3
Slc16a9
Umad1
Rpa3
Dop1b
Pxdc1
Tgm1
Rabggta
Ap1g2
Klhdc8b
Ccdc71
Max
Mtfr1l
Chid1
Actr10
Jade2
Ror1
Phyhipl
Zfp991
Zfp978
Plcxd1
Gtpbp6
A630095N17Rik
Dnajb2
Tuba4a
Znhit2
Tm7sf2
Mrpl49
Fau
Faim
Rtcb
Lgmn
Exd2
Mt1
Mt2
Ndrg4
Pitpnm1
Cdk2ap2
Slc17a5
Ptms
Lag3
Timm44
Phf12
Tsga10
Lipt1
Smyd4
Rpa1
2210016F16Rik
Zfp868
Spast
Itm2b
Flrt2
Cep192
Smad7
Plekha7
Mturn
Cox8b
Nadsyn1
Dhcr7
Pdlim5
Arhgap32
Slc25a1
Sigmar1
Dctn3
Arid3c
Zbtb8a
Rap2a
Marchf7
Elobl
Coil
Pmaip1
Hcfc2
Glt8d2
Slc35f2
Arhgap19
Mapkapk5
Dpf3
Cdkl2
Chn1
Csn1s2a
Picalm
Fbxo34
Atp2c2
Steap3
Etv6
P3h1
AU022252
Shc1
Ms4a10
Pygo2
Pbxip1
Tcea3
Gmeb2
Slco5a1
Castor1
Uggt1
4930474N05Rik
Greb1
Hspb1
Olfr871
Ccdc60
Vdac3
Poll
Dpcd
Cmip
Slc4a2
Cdk5
Klrb1b
Socs2
Cep63
Anapc13
Tvp23a
Ryr2
Smad4
Olfr1034
Cerkl
C1ql1
Hipk2
Pitx3
Gbf1
Mterf1b
Klhl13
Ankle2
Fignl2
Pdha1
Fam118a
Tha1
Tmem235
Pnrc1
Pus3
Ddx25
Cdc45
Tent5c
Cit
Hes3
Fbxl7
Cspp1
Cops5
Mettl9
Rbm47
Caprin1
Trabd
Hnrnpa2b1
Cbx3
Clasp2
Mamstr
Ppp1ccb
Ppp1cc
Cd300e
Pik3r3
Sirt7
Mafg
Wiz
Midn
Atp5d
Nfix
Tmtc4
Rpl12
Lrsam1
Akr1b8
Fam161a
Rnf103
Slc12a2
T2
Ttc9b
Pdia3
Catsper2
Tpst2
Ttc21b
Cep112
Gjc1
Glod5
Sp2
Nr2f6
Mnx1
Ushbp1
Kctd6
Oplah
Ube2d1
Akt2
Hdac1
Tdp2
Acot13
Glra3
Lrrn2
Raet1e
Raet1a
Cenpa
Tom1
Zfp982
Rpp38
Acbd7
Cul5
Ust
Pdrg1
Cds2
Snx10
Foxd2
Recql4
Mfsd3
Lrrc14
Arf2
Rpp40
Nsf
Gli2
Arhgap42
B3gnt2
Msh6
Zbtb25
Zbtb1
B4galt2
Atp6v0b
Dph2
Slc22a17
Kcnt1
Nkiras2
Dnajc7
Fads1
Prr36
Lrrc8e
Fam168a
Bhlhe40
Mkrn2os
Mkrn2
Lama5
Zdhhc20
Irgm1
Ttc28
Slc22a23
Pfkfb2
Zbtb34
Yod1
Tssk5
Hgh1
Gna13
Cuedc2
Psd
Fbxl15
Ltc4s
Ankrd6
Trh
Pm20d2
Slc13a2
Pex5
Rmnd5b
Pgrmc2
Klhl2
Abcc1
Cacng2
Fndc3b
Ctbp2
Rbp7
Txndc12
Btf3l4
Dab1
Unk
H3f3b
Sgce
Peg10
Pxk
H3c15
H3c14
H2ac19
H2ac18
Cfl1
Csnk2a2
Ptch1
Lrrn4
Cluh
Rcc2
Vstm2l
Ap2m1
Ntng1
Slc5a1
Nup85
Kcnq3
Hey1
Atad3a
Ephb3
Setdb2
Gm45935
Cab39l
Dnase2a
Klf1
Gcdh
Prrt4
Rbm28
Tbl1xr1
Ctif
Elovl5
Tmem42
Actl6b
Cpsf4l
Tmem151b
Kcnj6
Ppfia1
Denr
Enah
Stk38
Timm9
2700049A03Rik
Nfyb
Mapk4
Lrrc8d
Xkr4
Rad51ap1
D6Wsu163e
Trim7
Trim41
Garre1
Mxra8
Dvl1
Pnkd
Ubfd1
Ears2
Gpbar1
Aamp
Smarce1
Tecpr2
Cinp
Mrps35
Axin1
Nanos3
Tcte2
Slc25a44
Rassf7
Phrf1
Lmntd2
Ppfibp1
Tubgcp6
Hdac10
Jarid2
Brinp1
Jund
Iqcn
Clec2h
Dus2
Ddx28
Igdcc4
Ppp2r5b
Gpha2
Atg2a
Setx
Plekha5
Ubtf
Camk2n1
Cdk13
Orai1
Rapgef1
Ssh1
Percc1
BC003965
Unkl
Ahdc1
Cnot11
Hif3a
Msc
Suclg2
Tmem63b
Mrpl14
Fam178b
Cox5b
Tnnc2
Ube2c
Phf11d
Cuedc1
Mbtps2
Xpo6
Trmt1l
Swt1
Cd55
Rasa2
Gprc5d
Hcn4
Poc1b
Galnt4
Dolk
Ginm1
Cort
Mael
Zfp64
Pdpk1
Marcks
Bloc1s5
Prickle1
Anxa4
Snai1
Col27a1
BC034090
Bcl6
Tbx20
Klhl30
Nrp2
Prss8
Onecut2
Ywhag
Tab1
Tpd52
Bcap31
Abcd1
Dmrtc2
Rps19
Lypd4
Nfatc1
Naa16
Mtrf1
Zfp628
Nat14
Ssc5d
Wipi2
Gprc5a
Fam102a
Ddx3x
Kpnb1
Timp2
Rwdd2b
Ltn1
Asah2
Ccnd1
Gpbp1
Mylk2
Rsbn1
Atg14
Zfp62
Tmem51
Sf3a1
Ccdc157
Pigk
Ghitm
Prmt9
Hpgd
Srd5a3
Zfp72
Iars2
Bpnt1
Reep5
Wnt3a
Slc24a1
Ints14
Mkx
Trim8
Dsn1
Bod1l
Dok5
Mok
Zfp839
Pllp
Slc14a1
Spred1
H4c14
H3c13
H2bc18
Cd47
Gpcpd1
Rnf220
Pdpr
Mdfic
Nkx2-5
Acbd5
Ncoa1
Per3
Aoc3
Aoc2
Hectd1
Dis3l
Zic3
Exosc6
Olfr212
Napepld
Nuak2
Klhdc8a
C1ql3
Zfp217
Wdr61
Rps21
Dnah2
Atp1a1
Aff3
Smim1
Mpzl1
Mnt
Ninj1
Gcnt4
Erbin
4930402H24Rik
Immp2l
Sumo3
Utp15
Ankra2
Cdr2l
Hacd3
Dnajc6
Mllt10
Rhbdf1
Mpg
Spx
Klf11
Map2k1
Wwc2
Garnl3
Sap18b
Sap18
Cdhr1
Smarcd1
Rtn4rl1
Dph1
Mettl14
Gpd1
Csde1
Ghrh
Ccpg1os
Ccpg1
Ptges2
Lcn2
Stx11
Fnta
Map7d1
Macroh2a2
Txlng
Pyurf
Igfbp2
Amotl2
Trip10
Gpr108
H2-M5
Zfp57
Fam53b
Mtmr12
Mfap3l
Set
Tmem104
Nat9
Nfatc3
Sh3gl3
Wdr34
Gdap1l1
Tmc8
Tmc6
Ripor2
Rnf44
Cdhr2
Smarca1
Mapk8
Rrbp1
Wscd2
Pck1
Kin
Atp5c1
Cox7a2
Yars2
Nrros
Capg
Pkm
Zfp35
Snx6
Grid2ip
Meaf6
Ube3c
Uhrf1bp1
Mier2
Zfp976
Sco1
Adprm
Trim62
Rev3l
Arap2
Igfbpl1
Cltb
Btbd3
Mfsd13b
Cdr2
Shroom3
Ccdc158
Phc2
Tctex1d4
Plk3
Btbd19
Mdk
Chrm4
Arid4b
Sox14
Gclm
Mfap1b
Teddm1a
Glul
Rabggtb
Afg1l
Rara
Catip
Tgfbr3l
Snapc2
Ctxn1
En2
Trim36
Caps2
Glipr1l3
Cbfa2t2
Crb2
Crocc
Plekha8
Fkbp14
Sun1
Skor2
Casc3
Plaat3
Crh