ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15057960 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◣ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Txndc11
Gm29733
Cd38
Alg14
Cldn34d
Ufsp1
Ache
Gatad2a
Timp4
Gata4
Gid4
Atrn
Urm1
Man2a2
Scn5a
Letmd1
Gm4861
Asxl1
Prdm4
Pabpc1
Gdap1l1
Car14
Znrf1
Eno1
Trabd
Galnt16
Smc6
Gen1
Lama1
Donson
Apbb2
Gm9736
Gm29802
Fgf5
Irgm2
Acp5
Trim62
Zfp410
Mecom
Chd1
Arfgef1
Mrc2
Sbk1
Apc
Wrap53
Trp53
Ywhae
Hes7
Aloxe3
Epha2
Dop1b
Gm3233
Mrpl23
Frem2
Rbm47
Rbp7
Teddm1a
Glul
Ints9
Hmbox1
Irgm1
Grb2
Terf2
Colec12
Zcrb1
Pphln1
Sfxn2
Arl3
Slc7a7
Ect2l
Slc9a1
Atoh1
Igdcc4
Vezt
Fgd6
Itm2b
Setd5
Mkx
Flywch1
Tbc1d5
Pxdc1
Ubtf
Spata24
Prob1
Tagln3
A930007A09Rik
Ginm1
Zfp964
Ppp1r16a
Kifc2
Foxh1
Cyhr1
Klhl1
Cpt1a
Myc
Pm20d2
Sp5
Scamp2
Mpi
Otx2
Epha1
Marcks
Qpct
Hcfc2
Glt8d2
G2e3
Wdr59
Mreg
Ddx20
Slc12a4
Marchf7
Wsb2
Hsd11b2
Nkiras2
Dnajc7
Zfp428
Gm9639
Gm19668
Pitx3
Gbf1
Frmpd1
Sh2d5
Adnp2
Pcif1
Fbxo5
Faim
Nrp2
Dynll2
Ano10
E030030I06Rik
Raet1e
Raet1a
Coq2
Thpo
Polr2h
Clcn2
Chrd
Enpp4
Pacsin2
1700122O11Rik
Pdcd2
Schip1
Kif17
Ndufaf4
Snx6
Ptprz1
Slc25a4
Tmc7
Macroh2a2
Bmerb1
Chrac1
Mllt10
Exoc6b
Abl1
Tbc1d9
Wipi2
Arid3a
Lypla1
Mmp25
Mios
Prkag1
Ptch2
Il17rd
Sigmar1
Dctn3
Arid3c
Arap2
Septin1
Tbc1d10b
Mylpf
Zfp710
Mdm4
Brms1l
Fstl1
Snrnp70
Gm3285
Gm10318
Gm36176
Ptpdc1
Mapk3
Gdpd3
Nedd4l
Slc37a3
Rab19
Polg2
Ddx5
Cep95
Tmem121
Cd37
Slc6a16
Pik3r3
Mn1
Hinfp
C2cd2l
Igsf8
Atp1a2
Ndrg1
Abcd4
Ifitm1
Add1
H3f3a
P3h1
AU022252
Mrc1
Zfp9
Rnf125
Zdhhc6
Vti1a
Llgl2
Notch2
Olfr1163
Nwd1
Arhgap32
Tmed7
Eif1a
Ptpra
Slc26a8
Mapk14
Hook2
R3hdm2
Inhbc
Plcxd1
Gtpbp6
Tfpi
Fcgr3
Asap2
Faiml
Cep70
Pik3ip1
Elovl5
Hdhd5
Rps6ka3
Tmem131l
Sox1
Cdkn2aip
Rtcb
Lef1
Mbp
Ctrl
Psmb10
Lcat
Msx1
Mpped2
Pou2f2
Spty2d1
Shoc2
Bbip1
Sh3rf1
Mycn
Kdm2b
Pmaip1
Abl2
Hipk2
Tanc1
H2az2
Nudt1
Junb
Ncoa1
Pde3a
Kif5c
Gm3250
Pnrc1
Arl2
Gnai1
H3c3
H2bc3
H1f2
Neurog3
Tcf20
Tmem63a
Lefty1
Tmco4
Rnf186
Ncdn
AU040320
Slc14a1
Radil
Frzb
Ncor2
Cfap300
Speer4e
Cerkl
Slc16a9
Prelid3a
Trip12
Fbxo36
Mthfd2l
Ccdc30
Zmynd12
Ppcs
Pum3
Slco5a1
Ncs1
Col13a1
Trim36
Foxj2
Trappc5
Mcemp1
Fcor
Pum1
Clec2h
BC034090
Cachd1
Rnf114
B3gnt7
Brinp1
Fbxl7
Mterf1b
Dennd1a
Tsga10
Lipt1
Arhgap42
Prrc2b
Stk32a
Cacng2
Cul5
Lifr
Tspear
Gm9508
Gm19402
Gm10272
Cep55
Mup4
Lzts2
Twnk
Mrpl43
Zfp980
Galnt15
Mab21l1
Snn
Bcl7b
Coa7
Acot11
Pdrg1
Setd1b
Rhof
Olfr539
Elobl
Coil
C1ql1
Man1c1
Uggt1
Ror1
Pdgfra
Uqcr11
Mbd3
Skil
Phlpp2
Mpig6b
Ly6g6c
Ddah2
Clic1
Tdrd3
Ubr1
Tmem62
Fgfr2
Ednrb
Rheb
Klf5
Pdpr
Enah
Dpp10
Anxa4
Lin9
Arhgap24
B3gnt4
Phf10
Tada1
Glis2
Lama5
Cort
Strn3
Ap4s1
Pdia3
Catsper2
Fgf6
Cdkn2c
Ppp2r5b
Gpha2
Atg2a
Cdkl2
Spry2
Agfg1
Soga3
Zbtb25
Zbtb1
Rnf220
Rnf8
Tenm4
Olfr1034
Ppp2r3a
Olfr1339
Smarcd1
Tal2
Cds1
Cxxc5
Adam22
Usp37
Cnot9
Cox7a2
Grin2c
Sema6a
Mapre2
Lsmem2
Ifrd2
Vrtn
Rasgrp3
Atxn3
Lrrc8d
Zfp513
Snx17
Eif2b4
Nr2f6
Ushbp1
Btbd3
Pcdhgb7
Pcdhgb6
Pcdhga9
Pcdhga10
Adgra2
Kif13b
Mapk4
Serpini1
Pdcd10
Slc12a2
Mterf1a
Kcnj6
Rrp36
Mea1
Klhdc3
Tef
Chid1
Ankrd36
Ctbp2
Gdpgp1
Cib1
Ubr5
Lhx5
Ccer2
Zfp868
Iqch
Aagab
Pdp2
Hdac1
Speer4f1
Gm9507
Gm2696
Myo10
Trmt1
Nacc1
Fam107a
Rpp14
Htd2
Igsf6
Rpl12
Lrsam1
Garre1
Pdlim2
Hnrnpa2b1
Cbx3
Cacng7
Hif3a
Zdhhc20
App
Tmem59l
Crlf1
Apoe
Apoc1
Exd2
C2cd2
Spdef
Vdac3
Ppp1ccb
Ppp1cc
Rab37
Slc9a3r1
Wdr91
4930402H24Rik
Pbk
Wdr61
Chka
Ppp2ca
Smarca1
Casc3
Epn3
Sh2d6
Ap2m1
Pou2f1
Smad7
Syne1
Crocc
Kcnn2
Gucy1b2
Vps28
Slc39a4
Cpsf1
Msc
Ypel1
Krtap10-4
Krtap10-10
Srrm4
Hoxa2
Tfeb
Rtkn
B3gnt2
Lhx1
Zfp976
Mturn
Ppp1r36
Prr5
Tmem119
Golm2
Tmeff1
Foxa2
4930474N05Rik
Mcf2l
Sall4
Cx3cl1
Mcl1
Cdh1
Kctd6
Mllt1
Scd1
Nphp3
Pald1
Srd5a3
Trh
Ptch1
Dmtn
Fgf17
Slc4a2
Cdk5
Wnt11
Ccdc60
Trip10
Gpr108
Tor1b
Pef1
Parp6
Pgrmc2
Shc1
Pygo2
Pbxip1
LTO1
Zfand6
Lrrn4
Ino80
Tgfbr1
Mpc1
Flrt2
Cltb
Chst15
Mcidas
Ccno
Tvp23a
Ptpn14
Actn1
Ttc28
Tulp4
Tor4a
Ttc21b
Nodal
Rab4a
Cyth2
Gbx2
Ltb4r2
Ltb4r1
Cideb
Sptb
Asah2
Smad4
Sirt7
Mafg
Tmem161a
Lhpp
Dapk3
Nmrk2
Pou5f1
Ptms
Lag3
Got2
Hapln4
Lrrc4b
Naa16
Mtrf1
Syt2
Jade3
Prex1
Kmt5c
Cox6b2
Prnp
Prn
Loxl3
Dok1
Usp13
Rassf7
Phrf1
Lmntd2
Aktip
Ralgps2
Fam227b
Dtwd1
Hsdl1
Dnaaf1
Tle6
Wnt3
H2-DMa
Brd2
Ropn1l
Enpp3
Tff3
Msh6
Rps21
Spink2
6820408C15Rik
Zcchc3
Cd24a
Mycbp2
Napepld
Zfp775
Lgmn
Gsx1
Appl2
Dnajc10
2300009A05Rik
Hivep2
Cep112
Sec22b
Poc1b
Galnt4
Stmn1
Mapk8
Tctex1d4
Plk3
Btbd19
Cdhr1
Ttc9b
Scrt2
Snrpg
Fam136a
Dab2ip
Kcnq3
Glra1
Ccn2
Hnrnpll
Cd47
Shox2
Kcnip4
Tprn
Tmem203
Ssna1
Ndor1
Anapc2
Grid2ip
Fam118a
Igsf23
Map3k20
Spaca6
B4galt2
Atp6v0b
Dph2
Crb2
Capg
Neil1
Tmprss12
Spaca4
Fam83e
Med16
Actr10
Defb5
Defb46
Ralb
Akt2
Fut4
Epb41l2
Ceacam13
Trim25
Zbtb22
Tapbp
Rgl2
Rasgrp2
Cyp27a1
Znhit2
Tm7sf2
Mrpl49
Fau
Slc22a23
Mamstr
Vsir
Ssh1
Chn1
Sorbs3
Pvr
Atg5
Tent5c
Gimap3
Ctr9
Zfp991
Zfp978
Olfr1028
Mtfp1
Meaf6
Phc2
Prkab1
C4bp
Zfp64
Asap1
Prom1
Nkx3-2
Mre11a
Ankrd49
1700012B09Rik
Mib2
Emb
Rbm24
Septin8
Fbp1
Ptk7
Ift140
Cramp1l
Dmap1
Coro2a
Slc13a2
Lfng
T2
Acta1
Hsbp1l1
Gna14
Ebf2
Ms4a10
Cstf1
Aurka
Mt1
Mt2
Adamts7
Kctd9
Cdca2
Gngt2
Abi3
Fn1
Trim68
Spag4
Cep63
Anapc13
Fam178b
Cox5b
Zfp286
Gpr162
Tor3a
Klhdc8b
Ccdc71
Pcgf5
Serpinf2
Picalm
Sugt1
Atp1b2
Gab2
Slc25a47
Brwd1
Sdc4
Spg20
Utp14b
Acsl3
Retreg1
Cd160
Dnmt3a
Glrx2
Mllt6
Stx11
Aff3
Tab1
Tmem42
Dgkd
Raph1
Bin3
Olfr138
Rrbp1
Srpr
Foxred1
Tmem199
Sebox
Poldip2
Cuedc1
Gpsm2
Cnn3
Mtcl1
Usp10
Zfp62
Ss18l2
Sec22c
Ghrh
Shroom3
Ccdc158
Slc7a9
Stc2
Slc25a24
Crabp2
Tnni3
Dnaaf3
Pus3
Ddx25
Cyp2a5
Nbea
Socs5
Ltc4s
Cox8b
Kcnj4
Zfp341
Pxmp4
Adamts20
Percc1
BC003965
Pelp1
Unkl
Epb41l1
Tchh
Abi2
Spint1
Ppp1r14d
Itpkc
Coq8b
Recql4
Mfsd3
Lrrc14
Reep2
Phyhipl
Syde2
Ccdc9
Dleu7
Rmi1
Hnrnpk
Foxf1
Nsrp1
Slain2
Cyp51
Esrrg
Dcaf11
Tmem104
Nat9
Msh5
Afp
Zfp36
Plekhg2
Slc66a2
Zbtb7b
Lenep
Rcsd1
Fnta
Bcl10
Efemp1
Lpgat1
Ntng1
Tcirg1
Ndufs8
Col27a1
Fgl1
Smim8
Rragc
Ppp3cb
Ccdc186
Rps10
Aoc3
Aoc2
Smarce1
Hsd11b1
G0s2
Phf20
Nostrin
Jak2
Ptk2b
Mad2l2
Draxin
Gjc1
Cd300lg
Abca8b
Grhl3
Rassf8
Rbm45
Cyct
Rtn4rl1
Dph1
Vmn1r1
Klhl34
Uhrf1bp1
Myrip
Castor1
Rrm2
Fzd7
Pik3cd
Zyg11a
Zfp600
Cluh
Clasp1
Cfap20dc
Zbtb8a
Dusp4
Usp36
Mfap3l
Fbxl19
Med12l
Cd9
Dhrs7b
Wbp4
Elf1
Daxx
Fignl2
Synj2
Ost4
Emilin1
Mesp1
Efna3
Tfap2c
Plb1
Slc25a22
Rplp2
Pidd1
Cend1
Tpm1
Umad1
Rpa3
Tlr2
Rif1
Foxp1
Mtfr1l
Mmp9
Ccar2
9930012K11Rik
Tmem63b
Mrpl14
Timm44
Mrps15
Slc30a9
Mylk2
Ptpn13
Dbx2
Slc22a15
Duxbl3
Duxbl2
Duxbl1
Abcc4
Csrp2
Zkscan6
Dner
Pcgf6
BC107364
Cux2
Fahd2a
Gas2
Fancf
Gpr179
Prmt8
Rassf4
Slc37a1
Tmem229a
Kcnc2
Snai1
Cspp1
Cops5
Plaat3
Ndufab1
Zfp217
Slc9a3
Rapgef1
Tbl1xr1
Pax3
Smim1
Tdh
Reep4
Hr
Hoxc13
Gm7932
H4c14
H3c13
H2bc18
Fbxo11
Olfr52
Olfr1044
Zhx1
Otop1
Tmem145
Prr19
Pafah1b3
Mical1
Wdr54
1700003E16Rik
Gm17660
Il17d
Ust
Immp2l
Xbp1
Kctd12
Rad52
Fam171a1
Dnase2a
Dydc2
Dydc1
Amotl2
Lrrc8b
Ctxn2
Cand1