ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX823607 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◣ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Greb1
Nkx2-6
Cldn34d
Kpna1
Fbxw4
Gm29733
E030030I06Rik
Abhd6
Cpt1a
Pknox1
Olfr806
Gm525
Hexb
Cdh12
Oasl1
Cox8c
Tmem125
Wwox
Vmn2r4
Pald1
Rbm17
Zfp143
Il31ra
Clcn4
Csf2ra
Ginm1
Aadacl2fm1
Setd4
Cbr1
Pcdh20
Cd38
Copz1
Frmpd1
Dapk3
Eef2
Tent5c
Wasf3
Taar6
Vmn2r102
Taar7a
Gsdma2
Ankar
Gm5458
Tbc1d16
Ccdc40
Cd209a
Tmem267
Esr1
Vmn1r2
Ell3
Msx1
Mfap1b
Osbpl1a
Zfp260
Tas2r134
Mtarc1
Txndc11
Erfl
Tcf20
Epha2
Slc25a4
Pisd
Gzmk
Gatad2a
Trim50
Fkbp6
Otop1
Dux
Gm4981
Fgf5
Gm51573
Frem2
Lef1
Sspn
Speer4e
Gm4861
Slc7a7
Dcdc2a
Cerk
Mycn
9230019H11Rik
Abca3
Abca17
Muc3
Trim62
Speer4f2
Pou5f1
Smarcd1
A930007A09Rik
Mybph
Chil1
Speer4f1
Zbp1
Alg14
Urm1
Timp4
Ufsp1
Ache
Scn5a
Letmd1
Znrf1
Pabpc1
Atrn
Smc6
Gen1
Eno1
Prdm4
Acp5
Gid4
Wrap53
Trp53
Asxl1
Zfp428
Spata24
Man2a2
Epha1
Lypla1
Bmerb1
Tmem181a
Prob1
Mup4
Otx2
Zcrb1
Pphln1
Cd37
Setd5
Slc6a16
Arfgef1
Ywhae
Wsb2
Vezt
Fgd6
Zfp964
Trabd
Galnt16
Donson
Zfp410
Lama1
Chka
Apbb2
Wdr59
Colec12
Tbc1d5
Apc
Thpo
Polr2h
Clcn2
Slc9a1
Nedd4l
Qpct
Rnf125
Grb2
Sbk1
Rnf220
Abl1
Mcl1
Ccdc30
Fbxo5
Mecom
Lsmem2
Ifrd2
Exoc6b
Zfp710
Sfxn2
Arl3
Enpp4
Chrd
Cerkl
Chd1
Rbm47
Ino80
Cd9
Ubr5
Ndrg1
Pitx3
Gbf1
Fcgr3
Slc12a4
Mdm4
Igdcc4
Nwd1
Ctbp2
Myo10
Pacsin2
Atoh1
Faim
Notch2
Ints9
Hmbox1
Mkx
Ptprz1
Llgl2
Zfp991
Zfp978
Dop1b
Olfr1339
Rbp7
Pef1
Slc16a9
Il17rd
Car14
Itm2b
Mbp
Rnf114
Arap2
Mreg
B3gnt7
Ptpra
Ubtf
Gata4
Setd1b
Slc37a3
Rab19
Tagln3
Mrc2
Zmynd12
Slc15a1
Ppcs
Ano10
Serpini1
Pdcd10
Uggt1
Hinfp
Mrpl23
Mllt10
Coq2
Marchf7
Faiml
Cep70
G2e3
Irgm1
Uqcr11
Mbd3
Tmco4
Rnf186
Polg2
Ddx5
Cep95
Pm20d2
Rhof
Hook2
Ncdn
AU040320
Mpped2
Zfp9
Tbc1d9
Ddx20
Kif17
Gdap1l1
Adgra2
Ubr1
Tmem62
H3c3
H2bc3
H1f2
Teddm1a
Glul
Raet1e
Raet1a
Mtcl1
Terf2
Ifitm7
Ceacam13
Rnf213
Tmed7
Eif1a
Nkiras2
Dnajc7
Mios
Flywch1
Snx6
Prkag1
Rheb
Ncor2
Cul5
Ect2l
Wipi2
Tmem131l
Tulp4
Sh2d5
R3hdm2
Ptch2
Adnp2
Sox1
Cdh1
Mpig6b
Ly6g6c
Hoxa2
Ddah2
Clic1
Pou2f2
Smim8
Pdcd2
Mab21l1
Rif1
Pou2f1
Ror1
Tfeb
Macroh2a2
Asap2
Sp5
Pde3a
Chrac1
Tnni3
Dnaaf3
Kif13b
Lrrn2
Hes7
Aloxe3
Septin1
Sh3rf1
Fgd1
Sigmar1
Dctn3
Arid3c
Slc26a8
Mapk14
Ppp2ca
Atxn3
C2cd2l
Amotl2
Zdhhc6
Vti1a
Trim72
Rmnd5b
Irgm2
Pcif1
Pmaip1
Slc12a2
Pxdc1
Clec2h
Glod5
Rpp14
Htd2
Usp13
Hcfc2
Glt8d2
Dynll2
Gja1
Brms1l
Plcxd1
Gtpbp6
Mib2
Cuedc1
Coa7
Arl2
Nudt1
Rpl12
Lrsam1
H3f3a
Cdhr1
Zdhhc20
Defb5
Defb46
Smad7
Fbxl7
Dhx32
Kdm2b
Scamp2
Mpi
LTO1
Sptb
Prkci
Gm9736
Pvr
Tprn
Tmem203
Ssna1
Ndor1
Anapc2
Prelid3a
Foxj2
Golm2
Tbc1d10b
Mylpf
Prickle1
Hoxb13
Rtcb
App
Inhbc
Gm29802
Rrp36
Mea1
Klhdc3
1700122O11Rik
Glrx2
Agfg1
Tal2
Elovl5
Onecut2
Anxa4
Glra1
Nphp3
Rps6ka3
Scap
Cep112
Coro2a
Gjc1
Grhl3
Tdrd3
Junb
Esrrg
Tmc7
Abl2
Arhgap32
Zbtb25
Zbtb1
Tmem121
Trim7
Trim41
Tanc1
Stmn1
Abcd4
Ccn2
Mllt6
Spty2d1
Slc35f2
Frzb
Ppp2r5b
Gpha2
Atg2a
Flrt2
Klf5
Dlc1
Mapk4
Trim25
Lhx1
BC034090
Crb2
Sema6a
Fam107a
Gli2
Slco5a1
Trh
Soga3
Marcks
Pdp2
Rps6ka5
Kctd6
Chid1
Ankrd36
Deptor
Shoc2
Bbip1
Pum3
Tsga10
Lipt1
Slc13a2
Asah2
Setx
Hmga1b
Hmga1
AI413582
Mcf2l
Pik3r3
Ccdc60
Zfp36
Plekhg2
Zfp64
H2az2
Tgfbr1
Elobl
Coil
Hif3a
Hnrnpll
Mterf1b
Dnmt3a
Ralb
Ncoa1
Hnrnpa2b1
Cbx3
Garre1
Stx11
Ncs1
Ankle2
Rcor2
Gnai1
P3h1
AU022252
Mllt1
Snn
Lhpp
Cacng2
Glis2
Syne1
C1ql1
Gm9639
Arhgap42
Gm3285
Gm10318
D030056L22Rik
Fnta
Ifitm1
Mterf1a
Hnrnpdl
Enoph1
Myc
Rab37
Neurog3
Jarid2
Gm7932
Fam227b
Dtwd1
Zfp980
Tada1
Fam53b
D630039A03Rik
Zfp868
Mzt1
Kif5c
Gmnc
Sall4
Tmprss12
Shroom3
Sema4b
Capg
Mmp25
Med12l
Gm36176
Rtkn
Tfpi
Lhx5
Sclt1
D3Ertd751e
Fahd2a
Hsd11b2
D5Ertd579e
Tmem63a
Lefty1
Kcnj4
Ccdc158
Zbtb22
Gdpgp1
Cib1
Zmynd8
Pnrc1
Mapre2
Ndufaf4
Vps28
Slc39a4
Cpsf1
Lrrc8d
Zbtb7b
Casc3
Pik3ip1
Cort
Gna13
Cmip
Wwc2
Olfr138
Gm3233
Klhl1
Fbp1
Dcaf11
Pdia3
Catsper2
Rab4a
Fgfr2
Tmem63b
Mrpl14
Trim36
Ryr2
Zgrf1
Larp7
Exd2
4930474N05Rik
Cdkl2
Loxl3
Dok1
Lama5
Macroh2a1
Msc
Ptch1
Cep55
Olfr1034
Slc14a1
Rtn4rl1
Dph1
Castor1
Snai1
Rassf8
Zfp982
Percc1
BC003965
Phf10
Olfr1163
Trappc5
Mcemp1
Fcor
Cdkn2aip
Ssh1
Fam118a
Mcidas
Ccno
Ap1g2
Trmt1
Nacc1
Usp37
Cnot9
Zfp513
Snx17
Eif2b4
Zfp976
Rmi1
Hnrnpk
Cachd1
Stk32a
Rragc
Gpr162
Snrnp70
Grid2ip
Acpp
T2
Adnp
Gbx2
Prrc2b
Cltb
Wdr61
Slc9a3r1
Slc25a22
Rplp2
Pidd1
Cend1
Set
Lifr
Plekha7
Kcnj6
Shc1
Cpsf4l
Smyd4
Rpa1
Parp6
Ms4a10
Olfr52
Olfr1044
Zfand6
Vrk1
Cd47
Nefh
Ap1b1
Ppp2r3a
Galnt15
Bcl10
Gsx1
Crocc
Rnf8
Nrp2
Hdac1
Lsm14b
Tigar
Jakmip1
Slc9a3
Rgs12
Smad4
Plekha8
Fkbp14
Scd1
Pdpk1
Mt1
Iqch
Aagab
Spint1
Ppp1r14d
Usp10
Syt2
Nr2f6
Vrtn
Hipk2
Emb
Ctrl
Rabggtb
Lhfpl2
Cspp1
Cops5
Prnp
Prn
Ypel1
Tmem59l
Crlf1
Ndrg4
H2-DMa
Brd2
Tdgf1
Lrrc2
Phlpp2
Mt2
Foxp1
Gm19668
Zdhhc2
Rtl8c
Inafm2
Tpst2
Fstl1
Rapgef1
Oplah
Agtrap
Lrrn4
Olfr90
Cds1
B3gnt2
Chst15
Dennd1a
Tfap2c
Agpat5
Wdr91
Tapbp
Cox5a
Slc25a17
Nutm2
Msh6
Itpkc
Coq8b
Fgf6
Tbl1xr1
Cxxc5
Nkx2-5
Ube2d1
Cdh5
Tmeff1
Hsdl1
Dnaaf1
Espn
Pik3cd
Mif
Ptms
Lag3
Gne
Socs3
Radil
Zfp62
Psmb10
Lcat
Tox3
Spry2
Trmt61a
Olfr539
Ckb
Lrrc8b
Trip12
Fbxo36
Umad1
Rpa3
Ackr3
Klrb1b
Hebp1
Smarca1
Camk2n1
Nkx2-2
Foxa2
Ppp1r16a
Kifc2
Foxh1
Cyhr1
Unc5b
Tctex1d1
Schip1
Tor4a
Tor3a
Rest
Hdhd5
Rps10
Lenep
Spef1
Cenpb
Gprc5d
Rps21
Cox7a2
Timm44
Mnt
Mthfd2l
Nid2
Cdkn2c
Asap1
Epp13
Aoc3
Aoc2
Ost4
Zfp341
Pxmp4
Serpinf2
Tha1
Fgr
Cuedc2
Gm3250
Pcgf6
Tspear
Cic
Ywhag
Mrps23
Emilin1
Abhd11
Tab1
Mup6
Meaf6
Gpsm2
Ust
Dnttip2
Ropn1l
Man1c1
Togaram1
Klhl28
Prkar1a
Actn1
Pgrmc2
Ctr9
Rassf7
Phrf1
Lmntd2
B3gnt4
Pelp1
Spag4
Enpp3
Pdrg1
Hsbp1l1
C77080
Nectin2
Slc4a5
Col13a1
Akip1
Zfp267
Pdgfra
Phc2
Krtap10-4
Krtap10-10
Klhdc8b
Ccdc71
Spg20
Usp36
Gm9508
Gm19402
Duxbl3
Duxbl2
Duxbl1
Prmt9
Cst3
Tenm4
Rgl2
Add1
Phf12
Gpr179
Dmtn
Znhit2
Tm7sf2
Mturn
Mrpl49
Fau
Ascl4
Zhx1
Ttc21b
Abcc4
Enah
Mical1
Fgl1
Smarcd3
Kazn
Dll4
Sirt7
Mafg
H2bl1
Plaat3
Tmem117
Obsl1
Inha
Tle4
Trp53bp1
Eomes
Scrt2
Ap2m1
Fgf17
Mov10
Afp
Proser2
Tcte2
2510009E07Rik
Smtnl2
Sbk3
Sbk2
Tle6
Ephx2
Mamstr
Zfp423
Zfp532
Spaca4
Fam83e
Gngt2
Abi3
Tmem42
Srd5a3
Btbd3
Rassf4
Hic1
Mtfr1l
Prkab1
Tead1
Pygo2
Pbxip1
Mdfic
Magi1
Bhlhe40
Ppp1r36
Pramel13
Garnl3
Prex1
Ndufa4l2
Naa16
Mtrf1
Cstf1
Aurka
Mbtps2
Cfap300
Mapk8
Zyg11a
Zfp36l1
Foxf1
Ttc28
Mapk3
Gdpd3
Meox1
Slc37a1
Igsf8
Ntn1
Max
Trip10
Gpr108
Spred1
Cd300lg
Syde2
Phldb1
Mtap
Ptk7
Pdpr
Abca8b
Mmp9
B4galt2
Atp6v0b
Dph2
Strn3
Ap4s1
Cd24a
Smarce1
Flad1
Cks1b
Lin9
Atg5
Flacc1
Dpp10
Snrpg
Fam136a
Mnx1
Slc7a9
Cep63
Anapc13
Sec22b
Ift140
Cramp1l
Unkl
Rasgrp2
Fbrsl1
Skil
Zfhx3
Lzts2
Tvp23a
2300009A05Rik
Napepld
Adam22
Chmp4c
Bcl6
Pum1
Chn1
Kcnn2
C2cd2
Ptpdc1
Cmas
Cd55
Plcb4
Vdac3
Slc4a2
Cdk5
Abi2
Rtl8b
Stk38
Rasgef1a
Ccer2
Arid3a
Kcnma1
Nyap1
Slc25a44
Ralgds
Hmgxb4
Aktip
Cma2
Twf2
Fn1
Hnrnpr
Rev3l
Mmp15
Klf6
8030462N17Rik
Nanos3
Lgmn