ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12142051 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◣ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Txndc11
Gm29733
Cldn34d
Alg14
Olfr138
Urm1
Gatad2a
Gata4
Ufsp1
Ache
Fgf5
Slc7a7
Tox3
Ncor2
Hes7
Aloxe3
Atrn
Enho
Sh2d5
Tcf20
Cd38
Gnai1
Fcgr3
Ginm1
Mrm3
Glod4
Sp5
Coa7
Rbp7
Slc25a17
Eno1
Timp4
Man1c1
Hsd11b2
Rbm17
Tfpi
Scn5a
Wrap53
Trp53
Smc6
Gen1
Epha2
Scamp2
Mpi
Foxj2
Pabpc1
Pbk
Znrf1
Epha1
Donson
Lhx1
Pik3ip1
Wdr91
Colec12
Pou4f1
Galnt16
Gdap1l1
Zfp964
Snx6
Letmd1
Ncs1
Spdef
Rffl
Slc25a4
Ifitm1
Ywhae
Tmem121
Olfr960
Med4
Gid4
Pitx3
Gbf1
Ints9
Hmbox1
Nudt9
Pigv
Igdcc4
Dach1
Tulp4
Zfp9
Acp5
Atoh1
Tbc1d5
Fam107a
Vrtn
Mapk3
Gdpd3
Man2a2
Tal2
Rnf220
Trabd
Mdm4
Garnl3
Igsf23
Slc9a1
Foxa2
Med16
Rbm47
Gm9736
Gm29802
Mrc1
E030030I06Rik
Raet1e
Raet1a
Wbp4
Elf1
Il17rd
Zfp267
Ddx20
Kctd9
Cdca2
Nectin3
Sh2d6
Schip1
Spry2
Frzb
Itm2b
Faim
Obsl1
Inha
Mycl
Cdhr1
Pacsin2
Selenbp2
Cul5
Thpo
Polr2h
Clcn2
Rps6ka3
Spata24
Prob1
Mecom
Fbxl7
Gm7932
B3gnt7
Igsf8
Atp1a2
Wdr59
Ubtf
Sema6a
Sbk1
Lhx5
Tenm4
Car14
Fbxo5
Mllt10
Chd1
Zfp629
Ano10
Chrna9
Nkiras2
Dnajc7
Mrpl23
Teddm1a
Glul
Grrp1
Gm30191
Zfp593
Fgl1
Nwd1
Emb
Mab21l1
Fzd8
Cep55
Qtrt1
Frmpd1
Ext1
Eloa
Prdm4
Gbx2
Msc
Setd5
Ror1
Asxl1
Klrb1b
Abi2
Rnf114
Apbb2
Pm20d2
Chrd
Rtkn
Tmem229a
Slc12a4
Chga
Lama1
Ypel2
Ppp1r16a
Kifc2
Foxh1
Cyhr1
Smarcd3
Dact1
Kif13b
C4bp
Coq2
Elovl5
Tuft1
Zcrb1
Pphln1
Rbm24
Fgf8
Vezt
Fgd6
Apc
Cd37
Slc6a16
Tmc7
1700122O11Rik
Arfgef1
Cxxc5
Zfp410
Ptch2
Polg2
Ddx5
Cep95
Crtc1
Neurog3
Tmprss12
Grb2
H2-T-ps
Exoc6b
Ect2l
Cryzl2
Dpp10
Zdhhc6
Vti1a
Cer1
Irgm2
Pef1
Notch2
Rtl8c
Anxa4
Zfp775
Sfxn2
Arl3
Enpp4
Dspp
Wdr54
1700003E16Rik
Casz1
Tmco4
Rnf186
3300002I08Rik
Adgra2
Tanc1
Deptor
Mbp
Zfp975
Itpkc
Coq8b
Trappc9
Hnrnpll
Pou2f2
Ldha
Tmed7
Eif1a
Atxn3
Mapre2
Ptprz1
Slc26a8
Mapk14
Chst15
Nedd4l
Faiml
Cep70
Klf5
Arid3a
Gm9639
Gm19668
Efcc1
Abl1
Retnla
Lpp
Dact2
Rps6ka5
Tbc1d9
Ccdc30
Zmynd12
Ppcs
Cacnb2
Ppp2r5b
Gpha2
Atg2a
Rnf125
Aqp7
Lhx8
Zfp933
Spns2
Zfp936
Tas2r109
Omp
Mogat2
Septin8
Zfp442
Zswim7
Ttc19
Arl2
Rassf4
Ednrb
Qpct
Kdm4a
Fam227b
Dtwd1
Macroh2a2
Olfr813
Olfr812
Ndufaf4
Pdcd2
Brms1l
Eomes
Rplp1
Lama5
Wipi2
Olfr893
Ankdd1b
Mpig6b
Ly6g6c
Ddah2
Clic1
Klhl1
Tnni3
Dnaaf3
Golm2
Sprr2a3
Tprn
Tmem203
Ssna1
Ndor1
Anapc2
Phlpp2
Sox1
Nudt1
Fgfr2
Rassf7
Phrf1
Lmntd2
Col13a1
Arap2
Syt2
Phc2
Zfp58
Zfp937
Gm3233
Rtn4rl1
Dph1
Slc22a15
Mesp1
Olfr461
Usp13
Add1
Stc2
Gm3250
Rin3
Fgf6
Nat8f6
Nat8f5
Septin1
Tbc1d10b
Mylpf
Hmga1b
Hmga1
AI413582
Hook2
Junb
Cachd1
Prelid3a
Tdrd3
Slco4c1
Amotl2
Tmem119
Zdhhc20
Adnp2
Pou2f1
Slc37a3
Rab19
Zbtb22
Tapbp
Rgl2
Svip
1700015G11Rik
Foxp1
Lmo7
Tsc22d3
Mkx
Sh3rf1
Mterf1b
Rbpjl
Matn4
Ptpra
Pdlim2
Msh6
G2e3
P3h2
Bin3
Ncbp3
Olfr1109
Gm4861
Mterf1a
Glod5
Glra1
Pdia3
Catsper2
Rasgrp3
Tsga10
Lipt1
Inf2
Tgfbr3
Lrrc8d
Ndrg1
Sclt1
D3Ertd751e
Mycn
Slc35g2
Zfp976
H3c3
H2bc3
H1f2
Itgb3
Lsm14b
Fam110c
Uqcr11
Mbd3
Rbms1
Tada1
Klf6
Frem2
Fnta
Ephx2
Sptb
Cort
Rheb
Pde3a
Helt
Wsb2
Setd1b
Rhof
Kdm2b
Chrac1
Tdgf1
Lrrc2
Pik3cd
Hcfc2
Glt8d2
Mycbp2
Otx2
Ralb
Mpped2
Snrnp70
Cox5a
Ankrd36
Nrp2
Marchf7
Iqch
Aagab
Rpp40
Rab8a
Coro2a
Ost4
Emilin1
Syne3
Speer4e
Pum3
Hnrnpr
Zkscan6
Prickle1
Gm3285
Gm10318
Gm36176
Grid2ip
Tmem121b
Zeb2
Selp
Trim36
Afp
Rtl8b
Gdpgp1
Cib1
Tmem63b
Mrpl14
Dmtn
Fgf17
Nostrin
Khdrbs3
Cfap300
Ugt1a9
Wwc2
Flrt2
4930474N05Rik
Per2
Sun3
Gm11992
Ncoa1
Zbtb25
Zbtb1
Rmi1
Hnrnpk
Spink2
Ncdn
AU040320
Pgrmc2
Gpr160
Ssh1
Mios
Fam118a
Nmnat3
Olfr1002
Chka
Duxbl3
Duxbl2
Duxbl1
Sprr2a2
Sprr2a1
Ppp6r1
Rad52
Lhfpl2
Pms1
Ormdl1
Shoc2
Bbip1
Tmem131l
Mnx1
Dbh
Mrgbp
Prcc
Dnajc10
Serpina12
Flacc1
Ubr1
Tmem62
Gm9507
Gm2696
Tmem181a
Ppp2ca
Mthfd2l
Asap1
Cyp2a5
Ttpal
Pmaip1
Slc16a9
Agfg1
Cacng2
Abl2
Stra6
Ccdc33
Ppp2r3a
Stk32a
Mov10
Hivep2
Slc9a3
Tmem59l
Crlf1
Olfr1229
Gpsm2
Tagln3
Pcif1
Olfr368
Tmub1
Agap3
Fastk
Smim8
Tgfbr1
Kcnn2
Gm10100
Krtap12-1
Bmp7
Bcl10
Cx3cl1
Nadk2
Trmt1
Nacc1
Adora1
Flywch1
Ctrl
Psmb10
Lcat
Pnrc1
Fn1
Rpp14
Htd2
Mapk8
Selenbp1
Gmfb
Cgrrf1
Pear1
Marcks
Angpt4
Crot
Etl4
Zhx1
Actn1
Zfyve1
2300009A05Rik
Abr
Dnaja4
Lin9
Uggt1
R3hdm2
Inhbc
Chst14
Prkag1
Zfp703
Plekha8
Fkbp14
Mrps23
Ndst1
Rbm45
Cyct
Ppat
Paics
Zfp62
Epb41l2
Sigmar1
Dctn3
Arid3c
Zkscan5
Zkscan14
AA986860
Asap2
Sst
Irgm1
Fads1
Elobl
Coil
Btbd3
Malt1
Pald1
Slc25a22
Rplp2
Pidd1
Cend1
Rnf8
Olfr1028
Atp1b2
Rmnd5b
Usp37
Cnot9
D5Ertd579e
App
Naa16
Mtrf1
Rpl12
Lrsam1
Aqp1
Gfra3
Npm3
Prex1
Cnn3
Zfp36l2
Ptch1
Tcf7l1
Zfp868
Slc26a7
Bmerb1
Tet2
Ablim1
Wdr61
Dennd1a
Ralgds
Appl2
Ccdc124
Dop1b
5730409E04Rik
Grasp
Smyd4
Rpa1
Vrk1
Prmt9
Got2
Mtfp1
Spty2d1
T2
Strn3
Ap4s1
Chid1
Atoh8
Smad7
Kif5c
Vps28
Slc39a4
Cpsf1
Kank2
Dusp5
Zfp513
Snx17
Eif2b4
Rest
Aldh2
Slc27a6
C1ql1
Slc25a11
Rnf167
Gp1ba
Tab1
Cma2
Ppp1r15a
Plekha4
Slc13a2
Jakmip1
Tle4
Reep2
Trappc1
Kcnab3
Cntrob
Triobp
Nbea
Speg
Ptprm
Acta1
Mreg
Ttc21b
Pelp1
Mpc1
Clcn4
Galnt15
Lypla1
Exd2
Aktip
Pdpn
B4galnt2
Zfp64
Pcgf6
Garre1
Cd24a
Mesp2
Ppm1a
Syde2
Pum1
Setdb2
Gm45935
Cab39l
Pdxdc1
Mpv17l
Grin2c
Tspear
Serhl
Zfp991
Zfp978
Hnrnpa2b1
Cbx3
Crocc
Hdhd5
Slc22a6
Npc1
Smad4
Nphp3
Cerkl
Clec2h
Pvr
Fstl1
Olfr539
Mcrs1
Onecut3
Eif4e
Snn
H3f3a
Pxdc1
Igfbpl1
Brinp1
Lsmem2
Ifrd2
Casc3
Ap2m1
Zfp36
Plekhg2
Trak1
Cuedc2
Tmem184a
Tnc
Slc38a10
Mapk4
Clcn7
BC034090
Kcna2
Rab11fip1
E030018B13Rik
Gna13
Mtap
Terf2
Ccdc60
Nkx2-5
Fscn1
Liph
Chia1
Ttc6
Slco5a1
C2cd2
Slc36a4
Aplnr
Arhgap30
Eps8
Ypel1
Cdkn2c
Spata46
Shox2
Axl
Gbp2
Lzts2
Twnk
Mrpl43
Rdh5
Cd63
Rab18
Togaram1
Klhl28
Sirt7
Mafg
Srpr
Foxred1
Daxx
Bcl7b
Dctn4
H2az2
Slc25a47
Hoxa2
Mmp15
Trim68
Poll
Dpcd
Slc10a7
Rbmxl1
Dcaf11
Mamstr
Pdp2
Hsbp1l1
Slc66a2
Srrm4
Nebl
Plcb4
S100b
Gpr179
Zfp39
Adamts6
Tgm5
Nudt16
Znhit2
Tm7sf2
Mrpl49
Fau
Speer4f1
Igf2bp3
Epha5
Tmem161a
Numa1
Slc22a23
Sulf1
Rrm2
Usp36
Mtmr12
Sphkap
Fibcd1
Rcsd1
Rprd2
Gcnt4
Nat8
Kcnj4
Lgmn
Cand2
Cdkn1b
Caps2
Glipr1l3
Gfi1
P3h1
AU022252
Proser2
Tle2
Mllt1
Scrt2
Tnni1
Qrich2
Krtap10-4
Krtap10-10
Tpm1
Cacng7
Rmdn1
Cpne3
Hs3st3a1
Gm8439
Adam17
Zfp428
Ctbp2
Slc4a5
Socs5
Cyyr1
Setx
Zc3h12c
Lrrc38
Sms
Syne1
Cdkl2
B3gnt2
Phldb1
Trim62
Smap2
Hif3a
Gsx1
Spg20
Pde6d
Cops7b
Adam19
Ccn2
Abca8b
Commd4
Neil1
Rxra
Cebpe
Abhd11
Trerf1
Rab37
Rgs12
Cep63
Anapc13
Csnk2a1
Raph1
Zfp319
Usb1
Dner
Tex19.1
Uts2r
Sp4
Pth1r
Loxl3
Dok1
Agtrap
Rhob
Slc38a8
Spock2
Creb3l1
Pcbp2
Slc44a3
Sugt1
Exosc6
Gdnf
Usp10
Fut4
Cand1
Ehd1
Tspan12
Spz1
Pik3r3
Set
Msx1
Trim33
S1pr5
Efna3
Ndfip2
Srd5a3
B4galt7
Tmed9
Olfr871
Jakmip3
Bsg
Hcn2
Serpini1
Pdcd10
Glis2
Tle6
Eif4g2
Timm50
Dll3
Espn
Marchf2
Gdi2
Soga3
Tef
Hes1
Mob4
Epm2a
Prkag2
Trip12
Fbxo36
Sec22b
Adam22
Ackr3
Slc5a6
Cad
Atraid
Hoxb13
Tmeff1
Nfatc3
Itln1
Nsrp1
Tead3
Trim30c
Klhdc8b
Ccdc71
Septin2
Hdlbp
Susd1
LTO1
Erc1
Zfp787
Htr2a
Spred1
Suz12
Adprh
Cd80
Ctf1
Bcl7c
Hoxb1
Shh