ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX735292 | Unclassified
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◢ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◣ SRX735292: Unclassified

◢ Cdk9: STRING

Calcoco1
Fyco1
Chac1
Nudt13
Phf12
Scrib
Prcc
Ccl4
Ccl3
Banp
Ddx23
Phb
Usp48
Ifrd2
Sspn
9430015G10Rik
Ifng
Dffa
Mrpl19
Rptor
Dync1i2
Dusp2
Usp5
Cdca3
Fastkd1
Nop14
Grk4
Ncln
Pprc1
Ap2m1
Ccl1
Cpsf1
Snx17
Eif2b4
Sec61a1
Kif2c
Btrc
Cotl1
Nedd8
Gmpr2
Naa38
Cyb5d1
Wdr70
Unk
Mtg1
Sharpin
Maf1
Sympk
Foxa3
Xcl1
Dhx33
Opa1
Bub3
Phlda1
Psat1
Proser1
Nhlrc3
Lrrc59
Dnttip2
Fbxl18
Rpp30
Rpia
Zfyve19
Dnajc17
Cwc22
Zfp637
Atp5o
Mapkapk5
Chchd6
Dcps
Sphk2
Rpl18
Hspa5
Zfp189
Mrpl50
Odc1
Chmp4b
Clpb
Usp31
Pomp
Mmachc
Ccdc163
Med6
Scaf1
Capn15
Hsph1
Ap1g1
Mrpl44
Ormdl3
Dffb
Cep104
Nr4a1
Tmed2
Fam193a
Commd9
Gatb
Pigu
Kbtbd7
Chmp6
Vcpip1
Pafah2
Mff
Med27
Asmt
Rps19bp1
Arl14ep
Timm13
Ccp110
Rps20
Pcbp1
Trp53rkb
Timm22
Aaas
Wnk1
Alg10b
Nfkbia
Krr1
Ube3c
Phf13
Kat7
Tmem11
Slc35b4
5730455P16Rik
N4bp2l2
Gsk3a
Ncbp2
0610012G03Rik
Cnot1
Lrif1
Htra2
Snw1
Il2
Herpud1
Ints9
Hmbox1
Gtf3c6
Cep128
Naa60
Crebl2
Rbl2
Ipo13
Pemt
Slc33a1
Lars
Tmem43
Chchd4
Oasl1
Hspa8
Tsnaxip1
Ranbp10
Nprl2
Cyb561d2
Ccdc77
Tnf
B4galt7
Rpl3
Nabp1
Tmem101
Ubxn1
Mettl25
Ccdc59
M6pr
Lemd2
Clec16a
Nmt1
Tex14
Clptm1l
Calm1
Wrap53
Trp53
Psmd7
Atg101
Rcc1l
Sepsecs
Srek1ip1
Cwc27
Ggps1
Arid4b
Invs
Erp44
Bicd2
Sass6
Max
Rel
Stk25
Psmg3
Ythdf2
R3hcc1l
Prmt6
Tmem214
Ap2s1
Eef1a1
Acp2
Trap1
Pabpc1
Rab5c
Dnajc16
Rabac1
Cmas
Palb2
Dctn5
Tmed9
Atp6v0b
Tbcd
Shmt2
Cdk9
Snrnp27
Znfx1
Ctu1
Kat2a
Crtam
Yars
S100pbp
Slc27a4
C87436
Spty2d1
Nudt15
Retsat
Elmod3
Snrpd1
Tmem245
Csf2
Edem2
Prim1
Srp68
Chordc1
Tnfsf8
Ap5s1
Slc7a11
Cltc
Tab1
Ndufa9
Rdh14
Cipc
Trmt44
Cnih4
Prkcsh
Ccdc151
Eef1akmt4-ece2
Eef1akmt4
Alg3
Cenps
Trip4
Eapp
Ndufs4
Slc7a1
Cox7c
Enc1
Rangap1
Ube2j2
Pfdn5
Phf23
Tbck
Aimp1
Nup54
Vps50
Snrpc
Rnf123
Ncbp3
Fam227b
Dtwd1
Vps51
Btg1
Zcwpw2
Azi2
Nfkb1
Eif2b5
Drg2
Wdr36
Zfpl1
Cdca5
Ndc1
Pcbp2
Togaram1
Klhl28
Rps21
Ubqln4
Lamtor2
Pigq
Slc39a13
Cluh
Sgms1
Sar1b
Mfn2
Smg8
Mrpl21
Ighmbp2
Mrpl35
Ccdc126
Nup153
Vrk1
Bud13
Mocs1
Tmem94
Thg1l
Zc3h11a
Zbed6
Nutf2
Klhl20
Nme1
Cdk7
Ptcd3
Polr1a
Nelfa
Zfp369
Gorasp2
Wdr74
Ptcd2
Mrps27
Iqch
Aagab
Mphosph10
Mcee
Mrps25
Ufl1
Lrrc8a
Rad18
Atp5g2
Blmh
Psmd3
Rpl27
Cstf1
Aurka
Znrd1as
Znrd1
Psmb5
Polr2a
Ttc4
Tarbp2
Ddx47
Fitm2
Ippk
Rab33b
Cct4
Mrps33
Cnot2
Ppp2r5b
Dgat1
Dmap1
Zfyve1
Pole3
4933430I17Rik
Kmt2d
Fam53c
2610001J05Rik
Slx4ip
Mkks
Snx18
Get4
Pex3
Adat2
Dhrs9
9130401M01Rik
Faf1
Fam149b
Ecd
Cog7
Map1lc3b
Tsfm
Tmem199
Poldip2
Cops8
Ddb1
Dcaf10
Dnajc11
Sec13
Ndufs7
Pcnp
Klhdc4
Mib2
Rps3a1
Dcp1a
Dus1l
Nup35
Gm3448
Gm3417
Tcte3
Ermard
Lrrc51
Rhot1
Slc3a2
Stau1
Rad54l2
Hinfp
4833439L19Rik
Gspt1
Gtse1
Rexo2
Usp30
Tmem115
Zfp738
Mrpl39
Cox7a2
Atf6
Bod1
Ndufs3
Kbtbd4
Rps23
Cops7a
Tfap4
Rplp0
Vmn2r4
Rpl9
Lias
Ppp6c
Cct8
Btbd8
Fra10ac1
Ube2g2
Tysnd1
Ccpg1os
Ccpg1
Ifrd1
Kifc5b
H2ax
Gapdh
Mettl9
Sars
1110004F10Rik
Cdk5
Cdk5rap2
Wbp2
Syt3
Psmb2
Jak2
Psmb6
Mtres1
Cnot10
Ddit3
Nol10
Arfgef1
Trub1
Pdcd7
Sdad1
Zfp513
Mrpl58
Rpl22
Tcof1
Mterf1a
Foxj3
Frg2f1
Rpl30
Tpr
Odr4
Gemin7
Ndufs2
Aars2
Ttc13
Arv1
Slmap
G3bp1
Mrps15
Ints14
Gfus
Eif5
Hexim2
Man1b1
E130309D02Rik
Prpf4
Cdc26
Lat
Nsfl1c
Tut7
Thoc1
Rpl8
Nek4
Rbm39
Eefsec
Tmem147
Rfc4
Srp19
Cdkn2aipnl
Cox6c
Gtf2h3
Eif2b1
Atf4
Tmed10
Kdm3b
Gid4
Cacybp
Dimt1
Actb
Dhx30
Arid1a
Actr10
Vps72
Plaa
Sdf2l1
Stx18
Mrpl30
Mitd1
Rbsn
Lman2
Slc38a1
Kmt2a
Eif2b3
Rab1a
Gmfb
Cops6
Phospho1
Eif4e2
Ptrhd1
Cenpo
Jrk
Rpl5
Rpl36
Eps15
Secisbp2
Rbm34
Ppip5k2
Gin1
Tpgs1
Heatr5a
Mlec
Kctd5
Rabl6
Tcea1
Brca2
2210016L21Rik
Alkbh8
Eftud2
Ccdc103
Lrwd1
Alkbh4
Sdhaf3
Mcl1
Nudcd1
Eny2
Mief1
Espl1
Atg16l1
Taco1
Diaph1
Mpzl3
Fbxo48
Ubr4
Cxcr6
Ddx5
Cep95
Actg1
Zfat
Ctdp1
Mrpl12
Zc3h10
Pcbd2
Rpl13a
Tspan4
Sf3b2
Ppp1r11
Polr2l
Ate1
Slc39a9
Erh
H3f3b
Rgl2
Sfxn5
Tatdn3
Nsl1
Mtrex
Dhx29
Aurkaip1
Thap4
Atg4b
Cant1
Snx19
Ric8b
Med17
Ddx1
Brf1
Them4
Eif3g
Ciao3
Ahcy
Tsg101
Trak2
G6pc3
Exosc4
Larp4
Arf3
Hjurp
A730008H23Rik
Hacd2
Rpl27a
Napg
Pa2g4
Ubb
Ep400
1810009A15Rik
Cdk5rap1
Cep135
Nrde2
Tra2b
Knl1
Ints12
Gstcd
Zdhhc21
Zranb3
R3hdm1
Alkbh3
Rbm17
Tefm
Mars1
Rplp2
Smim13
Zbtb37
Nars
Trp53rka
Epn1
Ndufc2
Tmem127
Ciao1
Pigg
Ndufa10
Pex14
Sema6a
Leng8
Ccdc174
Tchp
Iars
Zfp566
Pten
Fem1b
Nuf2
Rbm22
Lcorl
Rasa1
Pgs1
Pde6d
Cops7b
Adrm1
Tmem248
Aasdh
Gtdc1
Fbxl15
Smim8
Brwd1
Poglut3
Ppil4
Heatr6
Rad1
Brix1
Cnot8
Psmf1
Ddx46
Marchf5
Cpeb3
Xpc
Lsm3
Wdr25
Wars
Wdr5
Pan2
Taf9
Rad17
Ak6
Grcc10
Gars
Rps13
Guf1
Rnf220
Ctbp1
Ybey
Mcm3ap
Ankrd46
Gtf2h4
Fam168a
Tti2
Snrpd3
Gucd1
Tfeb
Rhbdd3
Ewsr1
Txnl4b
Dhx38
Mre11a
Ankrd49
Tyw3
Cryz
Zfp672
Tmem129
Tacc3
Sh3bp5l
Ndfip1
Zfp729a
Zfp148
Smim11
Uspl1
Epc1
Gtf2b
Egr2
Myc
Lancl2
Stx8
Cfap52
Zfp606
Txlnb
Dis3l2
Lyrm2
Man2c1
Ndufb5
Mrpl47
Gtpbp2
Gas2
Nle1
Eif4a1
Nup155
Ap4e1
Rnf166
Ctu2
Rabggta
Mrpl34
Adck1
Appl2
Pus3
Ddx25
Rdm1
Secisbp2l
Twf1
Zfp706
Ube2z
Psmd12
Plk3
Siah2
Nelfb
Pdia6
Gtf2h2
Fam118a
Mrps16
Polk
Cert1
Zfp661
Calm3
Arl8b
Ssbp1
Cul2
Cpped1
Wasf1
Cdc40
Prrg2
Nosip
Noc2l
Csde1
Golga4
Kif13b
Nup188
Dolk
Srsf2
Mfsd11
Ncdn
AU040320
Mrps2
Ube4a
Zfp607b
Map3k10
Bub1b
Atp2b2
Gm3435
Serbp1
Smarca4
Wdr34
Ccdc142
Ankrd13a
Pbld2
Hnrnph3
Gabpb2
Trib1
Hmgxb3
Cd44
Arfgap1
Trmt5
Slc38a6
Mkrn2
Lrrc45
Cenpx
Prkch
Ndufab1
Vipas39
Ahsa1
Pcif1
Eif3c
Ppih
Cnot4
Aftph
Psmd4
Txnl1
Trmo
Zfc3h1
Thap2
Slc35a1
Desi2
Tbp
Josd2
Nup214
Ankle2
Snrpe
Trmt10a
Mttp
Dnm1l
Exoc2
Rpf1
Tsen15
Mdc1
Cdc45
Edem3
Mrpl1
Gpam
Rce1
Srr
Smg6
Tsnax
Qtrt2
Ccdc191
Thyn1
Acad8
Erdr1
Slc25a32
Dcaf13
Bhlhe40
Spink10
Fbxo38
Ccz1
Pomt1
Trim23
Trappc13
Shld3
Dpf1
Srsf1
Morf4l1
Arfgap2
Ttc14
Cdiptos
Cdipt
Ift46
Exd2
Rapgef1
Rbm28
Pold3
Gtf2a2
Zc3hc1
Scfd1
Xrra1
Spcs2
Coa8
Bag5
Adat1
Tti1
Rprd1b
Ankrd40
Klhl18
Kif9
Nip7
Cog8
Taf11
Tomm7
Prpsap1
Kdm8
L3mbtl2
Tpm1
Luc7l
Yipf2
Timm29
Mrpl40
Hira
Atxn1l
Clint1
Map3k4
Tars2
Prdm15
Cops9
Mzf1
Tpgs2
AW554918
Trib3
Snx5
Mgme1
Bod1l
Txndc15
Abhd10
Mis18bp1
Rpgrip1l
Fto
Mtf2
Arih1
Ccnq
Eif4ebp1
Dido1
Gid8
Nploc4
Wdr4
Commd2
C1qbp
Acadvl
Esyt2
Kpnb1
Taf10
Noc3l
Tmco3
Dcun1d2
Hdlbp
Dpy19l4
Trpc4ap
Septin2
Ttc17
Zfp846
Prkacb
Vps25
Map2k5
Mrps10
Pou2af1
Wdr46
Pfdn6
Zfp1
Ptp4a2
Cbr4
Rnf115
Polr3c
2700062C07Rik
Vti1b
Slc25a3
Dhx16
Orc5
Ints4
Kat8
Brd3
Skp2
Lmbrd2
Cdk19
Ulk2
9030025P20Rik
St3gal2
Tvp23b
Tbc1d14
Tsn
Thoc3
Manf
Cdca8
9930104L06Rik
Atpaf1
H2-K1
Sart3
Iscu
Gosr1
Smn1
Exosc6
Kpna6
Utp15
Ankra2
Nbas
Taf8
Trmt12
Fis1
8030462N17Rik
Mat2a
Tpt1
Slc9a1
Rpl19
Sfr1
Atp1a1
Ggnbp2
Zfp689
Tial1
Pisd
Coil
Malt1
Fam219b
Prorp
Gtf3c3
Zfp668
Zfp646
Thumpd3
Riok1
Cage1
Tomm6
Tecpr2
Cinp
Sirt2
Nfkbib
Zfand5
Prdx1
Srrd
Hps4
Zfp41
Ado
Trappc8
Katnal1
Srsf9
Abcb8
Pdcd1
Slc46a3
Pigl
Ncor1
Rplp1
Mapk1ip1l
Med23
Rdx
Slc35e1
Haspin
Rint1
Calr3
1700030K09Rik