ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2140209 | MM.1S
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◣ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

UBE3C
SUMO3
SH3GL1
CHAF1A
ANKS6
HM13
DAZAP1
SLK
ADGRB3
ALG6
SHLD2
GLUD1
SUMO2
SCAMP5
MEF2C
PTBP1
SUSD4
MIER1
ADAM23
SLC4A2
CDK5
OTUD7A
ARHGAP32
SMARCA4
FGGY
BLOC1S4
RALGDS
NPEPPS
STAU2
MYCL
ACVR1B
SBK1
AP2A2
NSD1
TFDP1
GRHL1
PRKCA
SFXN1
RABGAP1L
CLSTN1
NR5A2
NSF
SAP30
FLYWCH1
TM2D2
ADAM9
CBX7
CHD7
FASN
UBE2E2
CACNA2D2
SPTAN1
GRIN2D
PLEKHF2
KDM7A
ACTN4
PPP5D1
CALM3
DTNB
PHF21A
CFAP206
CUTC
COX15
C17orf58
PRKCE
ST7
FCHSD2
PATZ1
MRPL45
DIP2A
IGF1R
LASP1
UBXN2A
NFASC
USF2
UPF1
ATXN7L3
FBXL3
CHIC2
IKZF2
OAZ1
ADCY9
PCIF1
IRF2BP2
LCOR
EFNA3
BSG
LYPLA1
CABIN1
MELK
IFT140
CRAMP1
SLC25A11
RNF167
AUTS2
PEAK1
HMG20A
USP28
GAB2
EIF4H
MRFAP1
PHIP
SKIL
GNB1
PTPRG
PKNOX1
RYK
CTBP1
STAT5B
LIFR
LYPLAL1
PTBP3
MLLT10
SCYL3
PARD6B
SMURF1
CBX6
ZBTB14
C3orf70
FEZ1
NEK6
ATOH7
ARPC2
SPRTN
EXOC8
PWP2
LOC102724159
ANKZF1
NF2
PTP4A3
RABEP1
SNX19
SLC6A6
FBXL22
APBB1
AMMECR1
AVEN
TMEM266
BTBD3
EXOC6
HHAT
PRMT3
MRGBP
FBXL5
TCTA
RHOA
RALGPS2
P4HB
SNX12
CCDC88A
UBAP2L
C1orf43
YEATS2
FZR1
PXN
NOXO1
GFER
SGPL1
ZC3H7A
PTPRF
WWP1
ZNF217
SIAH1
TAOK1
ARRDC3
THAP12
GVQW3
UBE2E3
MAZ
ZNF787
PAPSS1
NSD2
SRSF6
RBKS
BABAM2
RUFY1
HP1BP3
TSPAN7
SINHCAF
SYNCRIP
LGALSL
MTMR3
MKLN1
GPAT4
DLL3
SRCIN1
FZD3
FBXO16
NDUFA4
GNA13
PPARGC1A
CPEB2
LARP1
HSP90AA1
ACACA
TADA2A
RBM14-RBM4
RBM14
SPEN
THUMPD2
MAST2
LUC7L2
FMC1-LUC7L2
FMC1
UBTF
MAPK8IP1
MINDY2
AMOTL1
OSTF1
NMRK1
ABCA5
SSBP4
RXRA
PDIK1L
C10orf95
KLF16
PDS5B
MAP3K2
MCM9
ENTPD4
DCK
RNF152
GNB4
MAP4K3
TRMT2A
RANBP1
HNRNPU
PPP4R2
LRRC20
THOP1
SGTA
TP53BP2
REST
DENND1A
ASPH
DHX15
FAM81A
MPP6
NELFCD
DLGAP4
PAIP2
TCHH
DENND2B
CTNNA2
MRFAP1L1
CDKL5
TMCC1
MAP4K1
EIF3K
LIMA1
PSMA1
PRR7
PDE3B
SPCS3
CNOT8
NCOA5
LARP4B
SPAST
VOPP1
MAPT
TARBP1
PPP2R5A
C15orf61
PPP6R2
SMARCB1
LPIN2
OPN3
CHML
NEURL1
APOA1
B4GALT2
ATP6V0B
CHEK1
SUZ12
MYO1D
SRSF4
IFI44L
UBXN4
RAB6A
WDR45B
KIF1C
INCA1
NEO1
C12orf66
NFRKB
PCID2
CUL4A
FAM168B
SFR1
ATP2B1
ADARB1
ZNF236
PXT1
KCTD20
GTF2I
CAPZA2
THAP1
SLX4
PTAR1
PPM1A
TEX46
KDM1A
EFNA4
ROCK2
LMNB1
SPATS2
QRICH1
CHD1
RARG
ANKRD26
LHFPL1
PTK2
CRTC1
PPP2R3B
SSH1
C9orf40
IKBIP
APAF1
SF3B1
KLHL8
BRD4
HIF1A
RRP1
ASXL2
KDM2A
PACS2
BRF1
THEM4
MPP5
SCAMP4
ADAT3
MDM2
DGKZ
SLURP1
RNF170
HOOK3
RNF187
POLA2
ST8SIA1
FKBP1A
SNORC
MAMDC2
PTPN12
CBLN1
CDON
EPC2
STRN4
NEDD4
FKRP
CD47
MXI1
ZSWIM5
ZNF318
NR3C2
UBE2Q2
XRCC5
GRAMD4
ATXN7L2
ZBTB12
EHMT2
C2
CDC73
MTRNR2L8
COX20
BCL2L1
BRD3
LLGL1
RNF44
SRSF11
SPTBN4
LRRC40
ARHGEF12
TPBGL
CIC
ARMH3
MAK16
TSC22D1
BTG3
POLE4
TAFA5
RGPD2
RGPD1
MIF4GD
LCORL
KLHL24
DISC1
DIPK2A
BMI1
COMMD3-BMI1
COMMD3
TPM1
PTMA
ARHGAP28
KMT2C
FOXO3
PHC2
LBR
AKAP1
GMEB2
BTBD9
ZNF652
TBL2
TANC2
C2CD5
UGCG
ZDHHC5
ZNF185
METTL9
HNRNPA2B1
CBX3
FAM189A1
AMIGO1
ZZZ3
WDR87
SIPA1L3
SREK1
CHRNA7
NAPEPLD
SYNGR1
TMEM145
FBXL16
YTHDF2
RAB10
AGTPBP1
GPATCH8
DNAJC5
MTRNR2L2
MSH3
DHFR
BSN
C16orf87
DRAM2
CEPT1
OPRL1
LKAAEAR1
USP6NL
ZBTB8OS
RBBP4
CUL5
RGS19
CNKSR2
PDS5A
HSF1
BOP1
ADM
HECTD2
MADD
MATR3
COPG2
GRK3
MAPK3
ETNPPL
DUSP14
SLC25A12
EBAG9
RAD23A
MEX3B
RNF144A
GALE
TMEM39B
TP53I13
SOX12
DBNL
ABHD15
LRIG3
BTBD1
MCUR1
PPP1R3E
BCL2L2-PABPN1
BCL2L2
FBXL17
TOB1
HSPA2
ZNF821
TACC1
SLC10A3
UBL4A
KLF13
PRKAB2
CHD1L
GFUS
VEZT
FGD6
PLEKHA5
HK1
ZFP1
UHRF1BP1
SLC25A22
ACSL4
KLHL32
SFXN4
TMEM201
TIGD2
BCL7B
SFMBT1
N6AMT1
AFDN
SNX10
C5orf24
ANKDD1A
CCDC171
YPEL1
SRCAP
LOC730183
TM7SF3
BMPR1A
UBXN2B
DENND5B
COP1
ARRB2
ANKMY1
DUSP28
INSR
LTBP4
PAXIP1
SUGP2
ARMC6
ADI1
REV1
PBRM1
GNL3
KIAA1549
LRBA
VHL
CLN5
SMAD2
MTCL1
SAYSD1
GSKIP
ATG2B
PUM1
ZCWPW1
MEPCE
RALB
FBXO30
RYBP
CCNF
VDAC3
PPM1E
MTSS1
LAMC1
CDC34
ZNF740
CSAD
CD99L2
STS
PUDP
TXN
AGO2
INTS7
DTL
TMEM170B
FSTL4
SF1
JMY
MYL5
ATP5ME
EMILIN2
ZBTB46
RNFT1
DYNC2H1
MYO6
USP31
KBTBD2
ARSG
SLC16A6
BARX2
DYRK2
LEF1
ZNF516
RCAN3
NDUFAF3
DALRD3
TUBD1
RPS6KB1
CRY1
BRD2
TRIB1
LRFN3
FANCC
VAPA
ARHGAP5
CAPRIN1
BAG3
MLH3
MINK1
TMEM191B
PTCH1
RASA1
HAGHL
CCDC78
PIK3CB
NFATC3
EHMT1
CDC20B
HNRNPA3
AGO4
ADAM22
JMJD1C
CAMKK2
REEP3
ADRA1A
MTRNR2L9
SYT11
GON4L
NDUFV2
TAF12
CHAMP1
ATP11A
UBE2D3
ANP32E
UTP23
DPF2
NFKB2
DHRS13
PPP3CC
SMIM11B
SMIM11A
PTPRK
PODXL2
TMEM18
INTS13
FGFR1OP2
STK32C
LRRC27
FAM124A
EVL
TLE5
GNL2
RIMKLB
POM121
GDI1
ASCC1
ANAPC16
STAG1
CLK4
VGLL4
PTPN14
TRPM7
CDK13
NKIRAS1
NR1D2
PREX1
GCFC2
JOSD1
GTPBP1
TEX264
RANBP3
MAP2K7
FOXN3
PRR30
PREB
TBC1D14
SCN8A
G3BP1
TOLLIP
YBEY
MCM3AP
OSBP2
BCLAF1
MYRIP
AATF
MAP4
PRKAR2A
PFN1
ENO3
DVL1
RAP1A
TAX1BP3
EMC6
TRIM33
ANXA4
AAK1
IGFBP3
CDKN1C
MECP2
SMARCC1
PDXP
CSNK1E
LONRF1
MISP3
UQCR11
CLK1
DUSP8
HSPA9
PHF12
PGPEP1
CAMLG
KIFC3
ARF1
MSL3
DAG1
POLR2J3
GNAO1
SNX30
NOP56
CTSC
COQ10A
DGCR8
AIG1
RFC2
MGA
MTRNR2L1
THEM6
GAREM2
B3GAT2
RPP25L
FAM151B
PRMT2
CBFA2T2
MRPL54
APBA3
CELF2
PSMG3
MAML3
FN3K
ZNF524
FIZ1
ARHGAP35
EPS8
ABCF3
H3-3A
GATD3B
GATD3A
KHSRP
SYNGR3
PDZD8
SRI
RNPEPL1
TTLL6
MIS18A
ALDH3B1
CCDC34
UNC93B1
SAFB2
SAFB
PLA2G12A
NTRK2
FOXP1
ABCA3
MAT2A
STXBP1
TRAF3
PKMYT1
RGS3
DSN1
GPR37
SLC9A5
PHYKPL
FHOD1
IFNAR1
YY1
DOCK5
KLF1
DNASE2
RUNX1
USP1
DPYSL2
UBAC1
FUT8
FAM53B
RPL3
RRAGD
MRPL53
PDCL3
KIAA0895L
ARHGAP17
RPS15
CCL5
POR
ANKRD29
CDK5R1
MEIS2
SMAD4
XPOT
RBM33
TMEM139
DYNLL2
CENPV
CASP2
TBC1D12
DIXDC1
GRIP1
MRS2
DGKG
CANX
ACTR5
SMYD3
NIBAN3
DOT1L
KDM4C
NPRL3
TMEM17
SNAP47
JMJD4
AP3S1
SLC35F6
PACS1
EGR4
CAMSAP1
NUP50
POU2F1
ZNF718
ZNF595
GAA
WDR1
PMF1-BGLAP
PMF1
ATXN2L
FGF7
ECE1
H6PD
POFUT2
TBCCD1
FAM98A
DNAJB11
PTDSS2
C7orf25
THOC1
SDHAF3
MPPE1
HNRNPA0
SPPL2B
LSM7
ANAPC4
ETAA1
ABCD3
LRP8
TXNDC15
SEMA3C
KCNA3
MNT
UVSSA
ZNF575
CHST12
PRKAG2
SDHA
CCDC127
BCL2L13
CRB1
RNF145
MBTPS1
PLXNA3
GTDC1
DCTD
ACSL1
STAMBPL1
SORBS2
TMEM191C
PRKACB
ZSWIM6
SAMHD1
GNAQ
PITPNB
MAP3K14
FAM234A
AFF3
SPHK1
RAP1GDS1
MCMBP
ATRN
THOC3
TMEM250
OGDHL
ARHGAP33
NFKB1
HSPA8
BRWD1
SRSF3
SEC24D
RAB35
CHMP7
RBPJ
ZNF41
ZDHHC18
BCL11A
ZNF3
ITPK1
UBE2V2
MKNK2
NR4A3
TBC1D5
CORO2A
CRELD2
ALG12
XRCC2
BAG6
APOM
PRELID3B
MTCH2
KANK1
SLC2A4RG
LIME1
C11orf80
ASNSD1
ASDURF
TMEM254
JADE1
CHST10
ZYG11B
PCM1
IFT81
SENP8
MYO9A
ZNF131
RNF32
AP1S2
HLCS
SLC25A39
RAPGEF5
POLR2J
RAD21
PHF2
DAGLB
CBY3
CD1A
NCKIPSD
NBN
PUS7
IFIT1
FRYL
CSNK1G2
DGLUCY
RPS6KA5
BCL2L11
LRFN4
SMC5
DNAJC9
EPN2
REV3L
FXN
CLK2
FOSB
MSH5
CLIC1
SMCHD1
PRKX
FRMPD4
DRG1
TAF4
PPP3R1
NCKAP5L
GBP4
MKNK1
PTPRA
NSG2
CCDC92
ZNF664-RFLNA
ZNF664
YBX1
TGFB2
SH3YL1
FUT11
ACP1
KANSL3
FER1L5
RGL1
TK2
PLEKHA1
CKLF-CMTM1
CKLF
CIITA
ARPC5
ACTG1
UNC45B
ATP6V1F
PPARA
KIAA0930
ATP6V1FNB
C1orf198
NCOA7
NEMP2
GSR
KHDRBS1
ZDHHC12
INTS6
SCT
CDHR5
CFAP20DC
RTL10
GNB1L
GPR176
LOC100289561
SLC5A3
SLC4A4
NANOS1
MRPS6
C3orf86
ABI2
TNFSF12-TNFSF13
TNFSF12
TMEM63B
MRPL14
GRSF1
MUC3A
MTRNR2L10
SOAT1
MYPOP
KCTD6
FBXO25