ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976676 | KYSE-410
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◣ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
MRPL11
GRB7
ARID3B
MTRNR2L8
MTRNR2L2
MSH3
DHFR
MAMDC2
TMEM199
POLDIP2
SLC45A4
TES
ASB2
SFSWAP
ERAL1
RBBP8NL
MTRNR2L1
UBE3B
KCTD10
RBM48
PEX1
GRHL2
RAPGEF3
STARD3
NAGPA
STAT6
TOMM22
TSR3
GNPTG
VIRMA
IL1R1
CD300LF
C8orf33
TMC7
APOBEC3B
MMP13
CRBN
BHLHE40
SPINK1
ELFN2
GLTP
ABCC10
C1orf174
TRIB1
TXNRD1
IER3
FLOT1
MIEN1
POLR3F
DZANK1
MOCS3
DPM1
LAMP1
CYP2A13
SALL4
SLC35B1
YAP1
ZBTB7C
TET3
PHAX
IDH3B
MRPL45
PSMD3
THAP7
SQSTM1
CARD16
TRMT1
NACC1
CD55
MTBP
MRPL13
SOCS2
KAT8
SPATA25
NEURL2
CTSA
PSMB7
ZZZ3
FLOT2
SUPT6H
SDF2
UNC13D
RARB
DNAJC11
EIF5A2
SPNS1
POLR2J
SERPIND1
LZTR1
EIF2D
SLIRP
ALKBH1
PECAM1
RGPD2
RGPD1
CLPTM1
SAP30BP
RECQL5
ANGPTL4
HAGH
FAHD1
MTRNR2L9
VAC14
POLR2J2
POLR2J3
ZNF335
ESRP2
ATP5MF-PTCD1
ATP5MF
SMG7
MRTO4
EMC1
GATB
MARVELD1
TRA2B
SENP1
PFKM
METTL25
CCDC59
GET3
SMN2
SMN1
CDKAL1
SEMA3B
PLAGL1
PGAP3
ERBB2
LANCL2
ZMYND8
CENPBD1
TRAF4
GSR
SUPV3L1
EPYC
RTF2
SGMS2
TMEM41A
IKBKB
GADD45A
IRF2BPL
ZBTB45
RBBP5
ZNF383
SLPI
RARG
FAIM
SRI
AXL
PLD1
SKIL
ANXA2
PSMD1
FAM98B
SUMF1
MRPS15
ABT1
ID1
AAAS
ISY1-RAB43
ISY1
TOX2
UVRAG
DDX41
ZSCAN22
MLX
COASY
REEP4
TXN2
MTA3
KCNG3
C16orf91
RRP15
HES1
TMEM205
RAB3D
CCDC159
SIGLEC15
TFPT
PRPF31
GOLM2
SART3
ISCU
NUP214
UBE2I
RPS16
CACTIN
ITGA2
HEXA
RAE1
UPP1
BIRC2
LIPK
KLF9
BCL3
RPTOR
LSG1
ERICH4
DMAC2
ATG14
RAB40C
LAMA3
NGDN
SYT12
VPS50
HEPACAM2
SLC25A53
GPRC5A
SLC25A45
FRMD8
ATAD2
BCAS1
TMEM207
HSPB1
KRR1
BANP
LRRC23
TRIM48
ATF3
LRRC46
LOC100509620
SUPT7L
SLC4A1AP
STX1A
STX6
DNAJC30
BUD23
CLDN24
CLDN22
ZCCHC4
RCOR3
SEPTIN9
LTO1
PHB2
STX16
U2SURP
ACP3
TRMT12
LGALS8
ZDHHC6
VTI1A
PMEPA1
SPAG16
RALGDS
TSFM
ZFYVE26
RAD51B
NUDT5
CDC123
NDUFA2
IK
GFM1
LOC102723996
ICOSLG
EXOC3L1
E2F4
ERCC1
TOP3A
SMCR8
RHOD
FOS
NCAPH2
LMF2
ZNF408
ARHGAP1
DOK7
KLF10
RAD51AP1
C12orf4
DUSP2
ANKMY1
RNPEPL1
WASHC5
NSMCE2
SERP1
EIF2A
COPS7B
SSNA1
ANAPC2
TRMO
ZNF576
IRGQ
UPK3B
PAXBP1
ECH1
BAHCC1
KMT5B
SAMD10
PRPF6
CSF3R
ELP5
CTDNEP1
SNRPC
EPS8
RGS3
LRRC29
FAM133B
SLX4IP
MKKS
TSN
PUS10
PEX13
RPS26
SPRED2
NCBP2AS2
NCBP2
DNAJB12
ENTPD7
EPHB3
DHRS13
MAP3K7
GPC1
NUP155
RDH5
ITGA7
BLOC1S1
TTC32
ZBTB7B
PRR3
GNL1
PRSS22
PKP2
TMEM248
PDAP1
BUD31
SUPT4H1
TPRN
TMEM203
NDOR1
ELF3
NAPRT
MROH6
STON2
LFNG
EIF4A2
NFKBIZ
PLEC
TRIQK
PDRG1
PPWD1
CENPK
SEC13
FAM162A
CCDC58
GINS1
CCDC88B
CCNT1
SPHK2
RPL18
FAM83E
TGFA
EIF3F
CD36
LIMA1
MAIP1
FAM184A
LRP6
NVL
KMT2E
OAZ3
UBE2L3
FEM1A
ZSCAN25
MRPS7
GGA3
BIRC3
DGAT2
TRABD
GBA
NFKBIA
AMN1
TBL1X
TIMM23
HSPBP1
BRSK1
COLEC12
KYNU
COQ5
TRRAP
ORAI3
ZFHX3
RRNAD1
ISG20L2
EFR3A
TH
TAS1R1
NOL9
NAPB
URM1
GCN1
MCM7
AP4M1
CBLC
SEMA6A
SERPINE1
LRRC47
PLA2G2A
KLK6
C2orf49
IP6K3
UBALD2
CASC3
PRKRIP1
SEMA5B
VCAM1
DPH7
HNMT
ENPP2
TBRG4
PUM2
MAGOH
SLC25A51
PHF5A
ACO2
SMIM6
POMZP3
RFC4
UBQLN1
STMN3
RTEL1
NDUFA9
AKAP3
KCTD5
SUSD1
MBD6
DDIT3
HUS1
TRIP4
ANXA3
PSG1
MEAK7
RAB3IP
TIMM50
CCND3
TAF8
KMT2A
FRMD7
SNRPE
C19orf33
MAN2C1
MAPKAPK5
TPST2
KPTN
PELATON
VPS11
RARA
PDCD6IP
TXNL4B
DHX38
PEPD
CAPN14
ATF6
FANCD2
ITPKC
COQ8B
FAM83A
SLC12A4
RASSF6
SLC31A1
FKBP15
PLEKHH2
GABRR1
TNFAIP1
IFT20
GTSF1L
PLEKHA7
RPEL1
NOL8
CENPP
CELA3B
FSCN1
NOTCH3
GTF3C5
ALG10B
PTPRR
ANKK1
CORO1C
CRKL
RPL7L1
LY6E
SPINT2
ING4
PSENEN
LIN37
KRT78
IGFLR1
IRF2BP2
C5orf51
ZNF2
DHRS3
RPS14
SLC2A4RG
LIME1
TEFM
HABP2
STEAP3
TIGD5
EEF1D
ANTKMT
TRMT2A
RANBP1
ARID2
INTS1
MTUS1
KMT5C
POLE3
C9orf43
UQCC1
MRPL1
SLC39A4
CPSF1
KRT80
SF3B3
COG4
ALKBH3
TLE3
LRCH4
FBXO24
SHISA5
SMG8
TRIM29
PSMD6
REXO1
TCAP
PNMT
MRPL27
EME1
WDR24
LY6D
POU5F1
FLRT2
TMEM212
CMIP
DDX23
METTL2A
RBM28
GLCCI1
CDC23
DNAJA3
CMTR2
NUS1
CLCN7
DNAH5
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TMEM120A
NR2F1
DPP3
GSDMD
WDR97
MAF1
CDK5RAP2
IGF2BP3
RIPK1
GOLGA3
FOCAD
PRR15
KRT19
ZGPAT
ARFRP1
HSPA9
PFN1
ENO3
RIPOR3
PSCA
MYNN
ACTRT3
ATP6V1G1
ERP27
NDRG1
MAP2K3
NME1
TMEM18
GTF2H4
LMAN2
COMMD2
PMPCB
PIGO
SCAND1
ENOSF1
MACC1
SELPLG
CEP63
ANAPC13
SNIP1
DNALI1
TSPAN3
ECHDC1
MRPL53
ZP3
ZNF703
TMEM127
CIAO1
TSEN34
MBOAT7
NUDCD3
PSMG2
CEP76
GFM2
SREK1IP1
CWC27
GRWD1
FCF1
AREL1
ACSL1
AQP5
LEKR1
TMA16
RHOV
RWDD1
GOSR2
HR
TM9SF4
PHF3
PPARD
ANKRD36C
AMDHD2
VWA7
TTC31
CCDC142
PIK3C2B
ARL14EPL
LSM14B
LIN52
ALDH6A1
KAT5
KLHL32
MED1
MUC17
NDUFAF4
GJB5
GJB4
EXOSC10
TFAP2C
PFDN1
SOD2
MIDN
SNRNP200
WTAP
SLC7A6OS
PRMT7
STARD4
RABL2A
JMJD7-PLA2G4B
JMJD7
LARP1
SCAF11
ABCC3
RPS9
NR1D1
RFFL
PDLIM2
DDX56
ANK1
AURKAIP1
REXO4
ADAMTS13
TIMM23B
PARG
MRPS33
GRK7
PPIP5K2
BBS10
TMEM40
SSBP1
ZNF17
HOXA3
SPRR2F
MMP3
GTF2IRD2
SSBP2
ZNF629
CTDSP2
ALG10
PRSS8
ETV4
MTIF2
CLDN4
TRIM55
MEST
PSMD12
PITPNM3
FAR2
MINK1
TMEM242
MRPS22
CXXC5
RAB24
PRELID1
COA8
BAG5
SMARCD1
NDUFB5
MRPL47
GUCA2A
ALDOA
TPD52L2
ABHD16B
NME3
MRPS34
EME2
MDM2
CEP162
USP30
LRFN4
BCL2L13
ATP6V1E1
SLC19A3
GPR39
DUSP6
CHRM3
OR2W3
C12orf73
RP1L1
ADSS1
DDB2
NUP107
EIF2S1
ATP6V1D
BMP7
EIF1AD
BANF1
NDUFAB1
XAB2
PCP2
TAGLN2
EVL
SH2D4A
FMN1
ADAM8
KCNN4
CALML5
SKIDA1
BCAR1
RNF223
EDARADD
CCDC124
E2F8
HTRA2
DQX1
PRKAR1A
PROCA1
HEMK1
C3orf18
RPL37
ADPGK
XRCC6
DESI1
SF3A3
MED20
BYSL
PNKD
BRD3
MRPL38
UBE2Q1
METTL2B
RCE1
RBM19
FAM110A
MFSD10
LRMDA
FGD3
TMEM39A
TRIM56
MTARC1
TACC1
THUMPD2
TAF6
CNPY4
RAD52
TBCB
POLR2I
OVOL3
CERK
GLIS2
ZNF805
VPS52
RPS18
GTF2H3
EIF2B1
FAM222B
EVPLL
LEO1
TSSC4
UNC50
COA5
PSG4
WDR53
FBXO45
IPO11
PROSER1
NHLRC3
MMP10
SPATS2L
JRK
ZNF623
NPIPB5
MB
LENG8
CCZ1B
TWF1
TJP2
ZNF497
PYCR2
ATP6V1H
SYT1
PSG9
HAX1
C16orf74
PARL
SERPINB2
IGFL4
TOMM40L
APOA2
BNIP1
TMPRSS4
VARS1
RHOT2
MRPL4
PLXNB2
MCCC1
NAPA
COMT
PPP6C
MRPS11
MRPL46
CSTF1
AURKA
RASEF
JAG1
DNAH2
ZSCAN21
BRPF1
SETD3
CCNK
UBE2H
UBFD1
EARS2
RNF128
NOP16
HIGD2A
STAM2
TPGS1
FBXO11
SNAI2
IVNS1ABP
RECQL4
LRRC14
MRPL20
SLC33A1
TIPARP
SART1
MPHOSPH10
MCEE
PERM1
GFUS
ZXDC
KLHDC7A
TINAGL1
LMNA
WDR72
FBXL18
PTPN2
PSG8
EHF
RPS21
LYRM4
FARS2
PLEKHG6
CTTN
KIAA0100
SH2B1
KAT6A
PIM1
IGFL1
ANP32A
AFDN
PDE12
ANAPC5
NAMPT
SRRD
HPS4
CDC42EP4
TCERG1
FADD
EXOSC3
NSFL1C
UBE2C
PDE4DIP
STYXL1
MDH2
PTP4A1
MRM3
GLOD4
PADI4
DCUN1D5
C8orf58
BRIX1
CCAR2
RNF139
COIL
CIAO3
C6orf132
ARHGAP32
PTCD3
POLR1A
PA2G4
RASA3
ARID5A
TMEM123
LCMT2
ADAL
CLCF1
PLA2G2E
OPA1
NR1H2
RNF39
UMAD1
SNRPD3
GUCD1
ZKSCAN4
LAPTM5
NDUFS7
LGALS7B
GOSR1
TMED10
PPAN-P2RY11
PPAN
ANGPTL6
STPG2
ZFPM1
HBP1
GPD1L
TUBA1C
PSMD5
RFESD
TBCK
AIMP1
UBOX5
FASTKD5
DHX8
ZNF3
HIF3A
OGG1
SUGCT
MPLKIP
ZNF213
MYL12A
MRPS23
XPC
LSM3
COMMD5
EIF5
TUBGCP6
SCARB1
TMEM95
KCTD11
USP32
ZC3H3
BBS1
ZNF256
VWCE
MDH1B
FASTKD2
ZNF302
BCL9L
SYVN1
ESRP1
CDKN1A
KRIT1
ANKIB1
METTL1
EEF1AKMT3
CYP27B1
ZNF668
ZNF524
FIZ1
CDK11B
CDK11A
NEMF
ZNF646
ARHGEF5
PSD
FBXL15
EBPL
TNRC6B
IQCG
IGFBP6
SOAT2
POR
RPL35A
KLHL18
KIF9
RPS29
LRR1
TRIAP1
HSD17B3
RPL6