ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930140 | RH-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◣ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L2
MSH3
DHFR
ARID3B
HEXA
MTRNR2L8
FRG2C
LAMP1
WASHC2A
ENTPD4
WASHC2C
MTRNR2L1
PDGFB
AP5Z1
CCDC200
TMCC3
MEOX1
ERCC1
TRIL
SPATA25
NEURL2
CTSA
TNC
FRG2
MUC3A
CORO7
DUX4
TNNC2
SNX21
MSS51
CLCN7
ANGPTL4
ARID5B
CELA3B
WBP1L
ZNF668
MACC1
C1QTNF1
COL23A1
RGMB
KLHL41
AFAP1
CSNK2A3
GPSM1
KCNMA1
THEMIS2
SUMF1
TMEM91
ZAR1L
BRCA2
STRA6
KAT5
ARHGAP25
TRMO
TMEM239
C20orf141
IGLL5
SYNPO
SLC1A7
STBD1
PVALEF
AATK
GADD45A
OR51T1
COMMD9
CLN3
APOBR
SLC35A5
ATG3
TGIF1
ATP6V0D1
AGRP
GFRA1
ABCC10
LTBP1
SULF1
CLDN5
PYCR1
FCRLA
IFNLR1
NFIB
BCAT1
SEC22B
SLC8A3
CD82
PRL
FREM1
SNX16
FOXB2
GBA
GET4
SPG21
MYPN
EPHA2
MYEOV
TNNT1
CYB5R1
IQSEC1
WDR74
SMYD1
UXS1
CLIP1
SLC19A3
TMEM120B
DOK7
FHL2
MYOG
TNNI1
MUSTN1
ITIH4
PCBP4
HDAC9
BLCAP
NNAT
EXOC7
TBL1X
HAGH
FAHD1
FLCN
B3GALT5
UPP1
CMTM2
PALLD
ARL14EP
ZNF92
ZNF507
TCAF2
TMCC2
ITSN2
TES
MYBPC2
HERPUD2
SLC12A3
VGLL4
SPAAR
HRCT1
TMEM205
RAB3D
CCDC159
DTNA
AMDHD2
SH2D7
PTPRD
PAFAH2
PDZRN3
MTRNR2L9
UNKL
NAGPA
ASF1B
TCF4
RDH5
ITGA7
BLOC1S1
HPCAL1
MFSD1
DPYD
CDH7
RRAGC
SBK2
BCL3
MAP3K7CL
HHIPL2
C20orf204
VPS33A
MYOD1
PDE4DIP
LIMK1
RFTN1
HNRNPLL
KDSR
TBC1D9
SLN
SMARCD2
MYLK4
SPNS1
RPS7
EN2
TCF7L2
NDUFA4
PTGIS
HNRNPH2
GLA
PRUNE2
ITGB3BP
EFCAB7
LURAP1L
RASGRP3
MYCN
LRRC47
BAX
RINL
CREB5
TNRC6B
IL32
RYR1
NUTM2F
NES
GIT2
ANKRD13A
TNFSF15
AGTR2
ID3
UBE2Q1
CNN2
TMEM40
SKP2
LMBRD2
SYNPO2L
CYP27C1
TBC1D5
CELA3A
SOBP
ACTC1
ANKRD1
APOC1
RMND1
ARMT1
TMEM167B
FAM200B
CCN2
ALK
HES1
PROM1
UCHL5
RO60
SVIL
EZR
AMPD3
INTS10
KLF3
NAV2
SSBP1
KDM3A
SLC38A8
FGF16
FLRT3
ATF3
TRIM16L
FGF6
LBH
OR14A2
BAIAP2
USP2
MYL5
ATP5ME
DAPK1
MARCHF9
CDK4
PPP6R1
EYA1
SLC44A1
NNMT
OPRD1
MYL12A
ACOT9
SLC25A34
NUP50
KANSL3
FER1L5
S100A2
BAHCC1
HRH1
SH3PXD2A
MXRA7
CRACR2A
SPATC1L
SRP68
PTK6
SLAMF1
NAPA
TNNT2
NUTM2G
ARMCX5-GPRASP2
ARMCX5
CRYGN
ZBTB18
CDRT4
MYCL
SREBF1
RBPJ
VTA1
NMBR
NPEPL1
MCU
MAST4
CNN3
ANKK1
VSTM2L
TP53AIP1
MINDY2
CHD3
SPATS2L
MYH7
PHC2
OCLN
NTSR1
WNT1
MSGN1
G2E3
SEMA3D
SYNJ2
MAPK10
PLXNB2
YARS1
S100PBP
ACVR1
INTS12
GSTCD
PRKAG3
MCOLN1
TP53BP1
SERINC2
RGS12
PRIMPOL
CNBD2
CASP3
ARHGEF2
SYTL2
NPAS4
LRRC17
USPL1
HMGB1
ZCCHC24
SYNE3
STYXL2
GPA33
ZNF335
SSTR5
CHST12
TP53I3
ABLIM1
SF3B6
FAM228B
RALGDS
NUDCD3
TEX46
KDM1A
ARID5A
HS1BP3
CCNG2
COL16A1
CGGBP1
C3orf38
LSM12
G6PC3
IZUMO2
TLN2
CARD16
SPRED2
LMF1
BTG2
SLC1A5
TBX2
SYTL3
MYO18A
CCNO
MGP
FSCN1
KLHL12
ABHD2
SNRPB2
IFNAR2
PPP1R3D
FAM217B
PLAU
PCLAF
SERP1
EIF2A
ATP6V1C1
MED18
PBK
C1QTNF7
ANXA6
BMF
UTP3
IGFBP6
SOAT2
MAMSTR
ENTPD2
GXYLT2
ERI1
TMEM131
SUPT7L
SLC4A1AP
CBWD5
CBWD3
SEM1
ODF2L
RBM43
RPA3
HOXC13
INKA2
CHD2
TDRP
TNPO3
GCK
SLC25A26
TACR3
ZBTB21
WSCD1
LPCAT1
CASD1
EFNA5
ST7
KANSL1
GNA12
MTHFD2L
CEP162
WRN
PURG
MTBP
MRPL13
MDM2
RAD9A
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SPRY4
STK24
ARL6IP1
AMZ1
COMMD4
VAMP5
TBC1D19
NCAM1
CLMN
MAB21L3
HAAO
TRIM62
SLC38A10
CCNI
ST3GAL5
ASB18
COX7A2
ZNF622
PROSER1
NHLRC3
BGN
DZIP3
CIP2A
SIX1
NBL1
RAP1B
JDP2
C2orf16
OPRL1
LKAAEAR1
SSBP2
ANKRD12
TMBIM4
C10orf67
SCAF1
RRAS
RPUSD4
FAM118B
VPS11
NOXO1
GFER
THAP1
CDC42EP3
SLC4A2
CDK5
PIP4P1
RRP15
PPIP5K2
MARCHF8
TM4SF4
IGSF10
PSEN2
TANK
SLF2
RBM48
PEX1
RARA
KLHL30
CDH11
CHMP2B
TPP1
ARID1A
IFFO1
PCNX1
HSPB2
CRYAB
C11orf52
PHF23
DVL2
E2F6
FIP1L1
CAND1
GPX4
ZADH2
UVRAG
CCDC174
ITPK1
PCBP2
TEX36
PSME1
FITM1
RRN3
SH3BP4
PLEKHS1
ARID2
ATP6V1H
MNAT1
SMAD3
SPATA9
RHOBTB3
MAP3K7
MTF2
CDK5RAP2
AZIN1
TBC1D13
AGAP2
TSPAN31
GRN
MUSK
UBB
DARS1
NR2E3
NUP42
WNT10A
PSMA5
SH2B1
PIH1D2
NKAPD1
BIN1
THAP10
LRRC49
LRRC58
RXRG
WBP11
C12orf60
STAT1
CCDC9B
SEPTIN9
SF3A3
ABCC3
AFF1
ZNF32
CASQ2
RPL22L1
FANCC
ZNF593
C1orf232
MRAP
CACYBP
GTF2B
RAPGEF4
WDR11
THUMPD3
NFIA
GPR146
LFNG
PER1
PEX3
ADAT2
NAGLU
DENND2A
INPP4B
RGS3
POLR2M
SH2D3C
NBPF26
NBPF19
NBPF14
TUBA1B
RTKN
ATP6V1G1
MSL2
CCDC146
PPP4R3B
PALD1
N4BP2L2
TTC30A
LOXL1
RRAD
DAPK3
EXOSC8
ALG5
DNTTIP2
KCNF1
MTMR9
SLC2A10
INMT
PLAAT5
DBF4B
MBNL2
LOC100421372
HSPA14
CDNF
WASHC5
NSMCE2
KRTAP5-3
PNPT1
CHRNG
RBMS3
OSGEP
APEX1
ARMC8
ALDOA
MEF2D
HNRNPD
EVPL
CCDC15
IL26
EFHC1
PLEKHD1
RIMS4
MPRIP
TSR3
GNPTG
EPS8
TBC1D30
GNS
JMJD1C
PPM1D
MRPL44
VGLL3
ZNF143
RBBP5
POMZP3
SLC35E2A
NUP205
SLC22A8
FAM120B
DLL1
ZNF519
ICA1L
VPS50
HEPACAM2
COX16
ANKRD40
NKAP
GBX2
THADA
SELENOT
LSMEM1
STK36
RNF25
SGIP1
STXBP5
HOXA3
PFDN4
MTMR14
MYL12B
TPM2
C2orf49
WDR5
POLR3F
DZANK1
ARHGAP28
TAMM41
OTUD7B
TMEM230
MYBPH
SLC13A3
TP53RK
NCKAP5L
SCAF11
SGO1
ZNF212
KYAT1
ARHGAP24
HSD17B11
FMO1
WASL
ERBB4
ARRB1
MATR3
PPCDC
ZNF775
PIPOX
KLHL7
INO80C
ZNF609
ERCC6L2
ATP6V1E1
DCAF10
FREM2
MEF2C
NUF2
TRIM55
MMADHC
ZNF397
PUM3
SLC38A7
ABAT
ATP5F1E
KAT6A
SETDB1
MTERF1
RHOJ
METTL15
KIF18A
ZNF644
NKIRAS1
ZSCAN30
WDPCP
SHPRH
RPL15
TNFRSF19
MDH1
COA7
NEXN
ELAPOR2
FAM240C
WARS2
SETD5
CHMP1B
LSP1
CAV3
PLCD4
FLT1
CRBN
NUP107
HSPB1
RTN4
RPL27
FAF1
COMMD1
SATB1
MOB4
KANSL1L
HSPG2
TRAF4
KRT80
ZNF830
CCT6B
RAB5B
ADNP
CITED2
DAB2
CDC7
CFAP69
SLC29A2
TRPM4
HRC
PCOTH
MIPEP
NBEA
XRN1
CHMP7
C8orf58
CCAR2
FANCD2
TTC26
MTFR2
ATP5MC1
MC2R
STON1-GTF2A1L
ALPL
ZNF343
COMMD2
LMNA
ATR
ICE2
SLC38A2
TMF1
TRIM47
USP46
THOC1
LOC114841035
FKBP2
LTBP4
UBXN2B
RAB11B
EPHA3
SMARCE1
TRMT5
SLC38A6
PPP1R14B
FDFT1
STX16
METTL25
CCDC59
ERICH4
DMAC2
C5orf51
KRR1
EIF4A2
ZNF292
PSIP1
C3orf14
CCNC
NDE1
MARF1
NXT1
SEMA3A
MFN1
RCHY1
UBE2H
ANKRD29
ARNT
ZNF684
PEX2
OGFRL1
CDC37L1
MEF2A
KMT5C
TM9SF4
DDX20
TMCO1
TMEM238
IPP
TMEM190
HFM1
CALM2
LIMCH1
HBS1L
LEMD3
ERMARD
MAPRE2
DMTF1
ZCWPW2
AZI2
UCKL1
KRIT1
ANKIB1
ERLIN2
EPM2A
MICAL3
ZNF112
PREPL
CAMKMT
ZMPSTE24
TBPL1
GPN1
CCDC121
HMCN2
LRRC74A
ANKRD50
SPAG8
RESF1
HINT2
ALG9
RPS12
CXXC5
GNG11
DMPK
TNFRSF10D
HOMEZ
HPS5
GTF2H1
CYCS
CNOT2
TXLNB
CEP120
KIAA0754
ALOX5AP
COL20A1
PPFIBP1
BECN1
SERPINI1
PDCD10
LSG1
MRPS23
ZER1
RARB
SLC33A1
PUS10
PEX13
MIDEAS
NBPF1
RAB11A
ATG4C
ZBTB6
HBP1
CFLAR
LRP5L
SLC35A1
SUGT1
PAMR1
PDAP1
BUD31
NME1
FAM98B
ELOVL6
TMEM39A
STARD4
LARS2
FRA10AC1
PACRGL
GMNN
TOMM5
UFM1
POGLUT1
COPS4
SCN3B
DHX8
HIPK1
PUSL1
ACAP3
ACHE
SRPX2
OPA1
FZD1
IGF2BP3
BMI1
COMMD3-BMI1
COMMD3
ZCCHC3
MTRF1L
VAMP4
MYCBP2
CPED1
SLC24A1
RPL5
APBB2
RUNX1
PRELID3A
ZCRB1
PPHLN1
COX10
PVALB
RFX3
HNRNPDL
ENOPH1
DDX5
CEP95
NRAS
TAF13
ALLC
PARP2
PATL1
ZFAND5
HSPE1-MOB4
HSPE1
HSPD1
ING3
MAGI3
CTNNAL1
DUSP6
OXNAD1
DPH3
DGLUCY
NUP54
NDUFV2
GPATCH8
MYL6
RPS6KA5
SHOC2
BBIP1
PLEKHM3
SECTM1
PPIG
NDUFAF5
ESF1
MYL6B
GLRX
ANKRD18B
ZRANB2
NEMF
STAG1
THAP5
DNAJB9
ACTR3
STARD3NL
DDAH1
CCN1
MTHFR
CLCN6
SMG8
YTHDF2
RIN2
DLAT
ANO6
EMSY
SCNM1
LYSMD1
HMGA2
GCLM
TRIM45
LDHB
IRF2BPL
TINAGL1
ATP2A3
SLC35D1
NUDCD1
TOP3A
SMCR8
PHF5A
ACO2
PCNP
CCDC77
KDM5A
CCDC169-SOHLH2
CCDC169
HACL1
BTD
ATP2A1
ADGRL2
ZNF780A
SLC9B2
PTPN1
CDH15
ETV4
PLSCR1
TUBE1
FAM229B
RPL21