ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930141 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◣ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

ARID3B
WASHC2A
PDGFB
HEXA
ERCC1
LAMP1
AP5Z1
KCNMA1
TNC
SPATA25
NEURL2
CTSA
WASHC2C
TNNC2
SNX21
STRA6
ARID5B
MACC1
SEC22B
MEOX1
IGLL5
FRG2C
CCDC200
GET4
SLC1A7
SUMF1
KAT5
CLCN7
ANGPTL4
ZNF668
CORO7
COMMD9
MTRNR2L1
WBP1L
CELA3B
TGIF1
MYEOV
SYNPO
CLN3
APOBR
C1QTNF1
RMND1
ARMT1
TMCC3
MSS51
PYCR1
RRAGC
PVALEF
AATK
ENTPD4
GADD45A
TRMO
ARHGAP25
SEMA3D
MTHFR
CLCN6
MTRNR2L2
MSH3
DHFR
VSTM2L
BCL3
MYOG
SLC8A3
FHL2
TMEM120B
VPS33A
TCF7L2
AMDHD2
ZNF507
NAGPA
APOC1
LIMK1
THEMIS2
MTRNR2L8
DOK7
USP2
TMEM91
SLC35A5
ATG3
HAGH
FAHD1
TMCC2
FSCN1
TCAF2
ETV4
PDE4DIP
BAIAP2
PCBP4
TMEM239
C20orf141
PRKAG3
UPP1
SPNS1
BAHCC1
SULF1
SYNPO2L
TBL1X
SMAD7
EZR
MEF2D
BAX
PRUNE2
FRG2
HNRNPH2
GLA
EVPL
NPAS4
ASF1B
MUC3A
ATF3
FGF6
ACTC1
ATP6V0D1
AGRP
CLIP1
CEP162
TBC1D1
CRYGN
IFNAR2
SYNJ2
TINAGL1
KLHL41
UBE2Q1
LRRC47
MYBPC2
TRIL
B3GALT5
DTNA
KLHL30
MXRA7
MARCHF9
CDK4
ABCC3
PER1
SPAAR
HRCT1
TNNT1
CCN2
NUDT14
CYB5R1
SH2D3C
CHST12
TMEM167B
SH3PXD2A
GPSM1
INO80C
SPRY4
NFIB
FREM1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
COL16A1
ACOT9
CD82
ITPK1
EPHA2
FOXB2
PLXNB2
NES
DUX4
MCOLN1
ABLIM1
MYLK2
AFAP1
IZUMO2
INKA2
TBC1D5
CDCA7L
COL23A1
NR4A1
NAA38
CHD3
CYP27C1
ITSN2
SOBP
CNN3
NNMT
PALLD
NR2E3
RDH5
ITGA7
BLOC1S1
CREB5
OPRD1
IGFBP6
BLCAP
SOAT2
NNAT
SLC12A3
UXS1
HHIPL2
ABHD2
ADAMTS1
HES1
RARA
MFSD1
DGLUCY
IQSEC1
NGFR
HOXC13
TNRC6B
MYOD1
SPRED2
RYR1
SERTAD2
HNRNPD
EYA1
TGM2
ARID5A
ATP13A5
VPS11
LFNG
HPS5
GTF2H1
ETS1
TEX46
KDM1A
EXOC7
L1CAM
MINDY2
PALD1
RANGAP1
ENTPD2
GUCA2A
TRIM62
LBH
RFTN1
FAM110A
AMOTL2
INTS12
GSTCD
SMYD1
TRIM55
ZNF609
SKP2
LMBRD2
POLR2M
KMT2E
CCNI
HERC5
TXLNB
SBK2
SCN3B
SMARCD2
ID3
CITED2
PDZRN3
YBX3
TBC1D9
LMCD1
MYCL
SPATC1L
KAZN
ATP6V1C1
SNAI2
TMEM40
LSMEM1
MAST4
OSGEP
APEX1
TNNI1
SMAD3
DUSP5
DUSP1
CDH11
ZAR1L
BRCA2
GRN
WASHC5
NSMCE2
KDM3A
HMX3
NTSR1
COMMD4
TBC1D19
SETD5
CELA3A
DAPK1
HMCN2
ZBTB18
ALDOA
ST3GAL2
MNAT1
PPP1R3D
FAM217B
TNNT2
EPHB2
INTS10
STBD1
KCNF1
FRMD4A
PRMT1
DUSP6
RIN2
NCAM1
ST3GAL5
ITGB3BP
EFCAB7
UBE2H
NUTM2G
SLC2A10
ARID1A
UNKL
TJAP1
ADAM12
SLC4A2
CDK5
MYBPH
TP53AIP1
ATP6V1H
IL32
TRAF4
DERL3
CXXC5
SYNGAP1
CUTA
KDSR
S100A2
MRPL44
MYH7
ZNF32
TCEAL7
DYSF
LACTBL1
TMEM205
RAB3D
CCDC159
SSX2IP
ATP6V1G1
LMF1
ABAT
GLIS2
VGLL4
SNRPB2
TCF4
PIP4P1
WNT10A
MSMO1
FAM240C
SUPT7L
SLC4A1AP
SLC19A3
GLIPR1L1
CAPS2
LTBP1
KANSL3
FER1L5
ABCC10
FUT10
SLC6A9
GPX4
MYL4
GPER1
ANKRD29
IL26
SSTR5
BCL9L
USPL1
HMGB1
MAPRE2
FGF8
C2orf49
ARHGAP24
CFLAR
VASH2
KLHL12
PHLDB2
GXYLT2
CCDC33
RALGDS
TRIM16L
ISLR
SPG21
TXNIP
RERE
RGS3
RBM28
MTF2
IFNLR1
PEX3
ADAT2
SPATS2L
GFRA1
ARHGEF2
LIMCH1
EFNA3
PTP4A3
MARCHF8
SNAI1
RAD9A
GTF2B
PROSER1
NHLRC3
SLN
INMT
KANSL1
EPHA3
PSMD3
SSBP1
CDRT4
NAV2
MAPK10
STYXL2
GPA33
C10orf67
MTRNR2L9
RPUSD4
FAM118B
VPS50
HEPACAM2
WDR74
PSEN2
SECTM1
TOGARAM2
SIX1
SH3GLB2
NDUFA4
C8orf58
SELENOH
METTL7B
MSC
JUNB
ATP5IF1
SLC25A34
C2CD2
PELO
ITGA1
ICE2
CCNG2
ELOVL6
PTPRD
COLEC12
ZNF292
EFNA1
MRPS23
CLDN5
RPP40
OSBPL7
ANKRD12
TTC12
GLS
ARMCX5-GPRASP2
ARMCX5
LRP5
TBC1D30
GNS
PLAU
FLNB
SUGCT
MPLKIP
LURAP1L
MGP
CHMP2B
TPP1
MUSTN1
ITIH4
NFIA
ZNF775
SEPTIN9
ILF3
RNASEK
C17orf49
SHB
HMGCS1
DES
IRF2BPL
RBPJ
CALM2
CRACR2A
TACR3
RDH8
COL5A3
LAMA3
MTRF1L
HES6
RAI14
PPP6R1
TCAP
PNMT
DDX20
LTBP4
FOSB
MC2R
ECH1
SLC22A8
PTGIS
ALLC
LOXL4
MDM2
E2F6
PAFAH2
NAGLU
TBPL1
RHOF
PMEPA1
RCBTB1
ZBTB40
SH3BP4
PLEKHD1
TBKBP1
STMN1
BMF
BORCS7
BIN1
GKN1
CRBN
MYLK4
IRF9
RASSF4
BHLHE40
SNX16
THOC1
OCLN
IPP
ACHE
NOXO1
GFER
TSR3
GNPTG
C5orf51
AZIN1
NUTM2F
CDC42EP3
FAM120B
DLL1
AMPD3
GAA
PTK6
SYTL3
SSBP2
CLMN
LSP1
COMMD2
RBSN
CGGBP1
C3orf38
UTP18
MBTD1
IRF7
ARFGEF2
CLTCL1
SRSF7
ATP8A1
LOXL1
ELOVL3
WWOX
CDK5RAP1
MAMSTR
RASGRP3
LSM12
G6PC3
SYNE3
WSCD1
PKM
AASDH
UVRAG
ZNF217
ZNF92
RGS9BP
ANKRD27
MLXIPL
ZBTB7B
FZD1
BCAT1
ADNP
CORO2A
NUP107
HIF3A
VGLL3
CXorf65
SMOC1
CTHRC1
COPS4
METTL9
OTUD7B
ANKRD1
ACKR3
TSC1
GFI1B
TOR1AIP2
TOR1AIP1
PELATON
PDLIM7
DRD2
SREBF1
ZP3
RPS7
VTA1
NMBR
NOTCH2
SLC24A1
STING1
PHF23
DVL2
SH2B1
SHPK
CTNS
CHRNA1
GTF2A1
MAP3K7CL
PSIP1
TMEM210
LRRC26
NFE2L2
LPCAT1
MTFR2
C20orf204
LRP5L
TTC9
DGKB
KDM4C
APP
LZTS2
TANK
CAPN2
MIDEAS
ARSG
GRAMD4
HPCAL1
USP15
SAV1
SYT7
RPL27
TTC26
CSNK2A3
YARS1
S100PBP
HSPB7
NACA
TBX2
NBPF26
NBPF19
NBPF14
RBMXL1
KYAT3
RTN2
SYNRG
MFAP4
CLCNKA
MADD
HMOX1
RAB11B
ATP2A3
AKR1B15
RARB
SLC1A5
OLFML2A
PUM3
TSPAN33
TRIM72
PYDC1
ELAC2
NDUFV2
RAD21
DPYD
NRAS
MCAM
NBPF1
SPATA9
RHOBTB3
KYAT1
KLF12
IGFBP5
DYRK1B
HRH1
SVIL
FSD2
WHAMM
FBN3
UBC
SLF2
KIAA0754
DUSP10
MTBP
MRPL13
ST7
USP30
NUF2
RAB5B
ANKRD40
TNFRSF19
TEDDM1
IMPACT
NEXN
TMEM100
IL21R
NEBL
LRRC75A
ENKUR
MDFI
FRMD3
EIF5AL1
CPA1
COL9A2
AAAS
BTG2
CCDC107
ALOX5AP
IRF2BP2
COX16
ANKK1
PFDN4
ARL14EP
MRPS31
WDR11
HS1BP3
ZBTB26
RAMP1
RPS12
PRR5
NDST1
GSPT1
THAP10
LRRC49
PRR5-ARHGAP8
TM9SF4
DNAJC25-GNG10
DNAJC25
DRG2
EN2
FGF16
LRRC17
ZNF654
ZNF572
SOX8
PBX3
MRPL34
DEPTOR
DDA1
ABHD8
MYL12A
KAT6A
RTTN
ACVR1
KDM6B
B4GALT2
ATP6V0B
CCDC88A
POMZP3
DPH2
SLC38A8
KDM8
SUN1
IKBKG
G6PD
TMEM233
ATP2A1
NAV1
NME1
TARS2
BRF2
NKIRAS1
NR1D2
CMTM2
TEX36
COL20A1
HMGA2
KIAA0895
ANLN
TESPA1
B3GNT8
JMJD1C
GOSR2
WBP4
ELF1
STAT3
MTERF1
IFFO1
TMEM190
IL11
ZNF335
PPP1R15A
RGMB
NOP53
LMOD1
GPRC5A
ZCCHC4
PRKAG2
C1orf198
MSL2
MYO18A
ASB18
CAV3
TRPM4
HRC
SLC7A5
KLF7
HLF
TMEM242
MAST2
SNRPB
SPACA6
FAM107A
ABR
CHMP1B
RBM25
RHOQ
ATP6V1E2
STX16
HDAC9
SYTL2
NBL1
RHOJ
METTL15
KIF18A
MCM6
CSRP3
GBA
SQSTM1
AIFM1
TEFM
ARMC8
TNFRSF1B
PBK
CCNO
CDK6
PRRT1B
SLC33A1
KLHL32
ELAPOR2
NDUFAF4
TRIM47
TSFM
TOP3A
SMCR8
PLEKHM3
RIMS4
GBX2
FAM185A
SETD3
CCNK
ATR
VPS13B
WBP1
INO80B
IER3
FLOT1
NAPA
RPL5
CBWD5
CBWD3
CBWD6
WDR75
MMADHC
JAG1
HSPB1
PLSCR1
CDON
FGD3
TNFRSF12A
THOC6
HCFC1R1
CLDN6
RBL1
DCLRE1B
AP4B1
SH2D7
RPN2
MROH8
SATB1
DRD4
ARID2
SF3A3
MTHFD2L
STON1-GTF2A1L
CASZ1
MYRFL
METRNL
AXL
ZSCAN30
FIS1
ZCCHC3
MTNR1A
PIKFYVE
TBL1XR1
TMEM238
BBC3
TERF1
CSK
CLDN15
PSMB7
MEMO1
BCL2L1
MPHOSPH10
MCEE
THAP5
DNAJB9
RUSC2
PTF1A
PNKD
MYL5
ATP5ME
MTMR14
PCNX4
POLDIP3
EPM2A
SPATA13
BET1
ARHGEF6
PTK2
CPT1A
LAMTOR1
SCARB1
SYS1
PPP5C
CCDC34
RFLNA
TBC1D8
COMMD8
DMAP1
CLK1
NPEPL1
DDX1
VMP1
PTRH2
PRDX6
RUNX1
PLAAT5
TNFSF15
NSUN4
KCTD9
CDCA2
POLR1F
H2AZ1
DNAJB14
SLC9A3R2
TRIOBP
COL12A1
LRRC58
RFC1
CDKN1A
SEMA6A
LEFTY1
FMO1
CUEDC1
IRAK1BP1
THRAP3
FOS
CBLL1
SLC25A32
DCAF13
NLK
ARL8B
USP37
CNOT9
RRAD
SULF2
RBM39
KLHDC10
HELB
MTREX
DHX29
WDR36
AIG1
MYL6
CRNKL1
CFAP61
EIF2B3
GTF2H2C_2
GTF2H2C
LRTM1
SAMD11
MYL6B
RAB3IL1
INA
OBSL1
INHA
FLCN
TRIB3
PTDSS2
SGIP1
SLC1A4
RBM24
NRG1
BDKRB2
ANO9
ACSL3
PLS1
HIVEP2
SDHD
SERINC2
RCAN1
OSBPL9
ID1
EML2
NEURL1
MFAP3L
HBS1L
SLC49A4
HSPBAP1
PSME1
FITM1
USP47
MRPS5
CXCL3
CALD1
FAM200B
LRIG3
GCK