ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976674 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◣ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
MTRNR2L2
MSH3
DHFR
MTRNR2L8
TMEM199
POLDIP2
MRPL11
MAMDC2
GRB7
ARID3B
SLC45A4
ERAL1
TES
CD300LF
MTRNR2L1
RBBP8NL
SFSWAP
C8orf33
MTRNR2L9
UBE3B
KCTD10
RGPD2
RGPD1
POLR3F
DZANK1
MRPL45
PSMD3
POLR2J3
BHLHE40
PGAP3
ERBB2
VIRMA
RARB
CRBN
SLC35B1
MIEN1
GRHL2
STARD3
POLR2J
CLPTM1
APOBEC3B
TXNRD1
C1orf174
MMP13
RBM48
PEX1
ASB2
ERCC1
POLR2J2
TSR3
GNPTG
TFPT
PRPF31
ATF3
LAMP1
TRMT1
NACC1
HAGH
FAHD1
STAT6
RAD51AP1
C12orf4
PSMB7
SERPIND1
ISY1-RAB43
ISY1
SUPT4H1
LZTR1
IDH3B
SPINK1
TRA2B
TMC7
CD55
VAC14
UNC13D
ESRP2
GATB
TSFM
U2SURP
FLOT2
RBBP5
C16orf91
UBQLN1
LPCAT3
HES1
RRP15
TOMM22
SNRPE
TET3
VPS50
HEPACAM2
STX16
SALL4
IRF2BPL
RAPGEF3
CARD16
PHAX
CYP2A13
NAGPA
MTBP
MRPL13
THAP7
ABCC10
SQSTM1
NAPB
SMN2
SMN1
JMJD7-PLA2G4B
JMJD7
MRPS11
MRPL46
ZNF576
IRGQ
ERICH4
DMAC2
SLIRP
ALKBH1
TBRG4
KRT80
SENP1
PFKM
NDUFB3
FAM126B
SKIL
SOCS2
ELP3
SLC25A53
PLEKHH2
NDUFA2
IK
SUPT6H
SDF2
NDUFAB1
MRTO4
EMC1
ZNF383
SERP1
EIF2A
SLC25A45
FRMD8
TIMM22
HEXA
PUM2
YAP1
EPHB3
DNAJC11
TRIB1
CLDN9
ZBTB45
ELFN2
CCDC88B
TJP2
TTC31
CCDC142
MFSD10
DDX41
DDX46
BTNL8
TRMO
DDX23
ZNF17
CDKAL1
TFAP2C
SUMF1
SAP30BP
RECQL5
BRIX1
ZNF3
TRAF4
GET3
IRF2BP2
PCNP
MFSD3
GPT
SUPV3L1
RGS3
UBE2I
GOLM2
LSG1
SUPT7L
SLC4A1AP
LMAN2
ATG14
REEP4
AGTPBP1
MUC3A
CASC3
STYXL1
MDH2
SRI
RARG
ZSCAN25
CHMP7
ATP5MF-PTCD1
ATP5MF
ZMYND8
DENR
MED20
BYSL
FAIM
PRKRIP1
IL1R1
HUS1
GABRR1
ZZZ3
CHRM3
C19orf48
POLR1H
RPS26
KLF10
SPHK2
RPL18
FAM83E
METTL2A
EIF3H
ATAD2
GTPBP4
TTI1
RPRD1B
WASHC5
NSMCE2
PHLDB2
MIEF1
USP30
PSMD1
POMZP3
RPL26L1
SPATA25
NEURL2
CTSA
KRR1
METTL2B
ZC3HC1
TBL1X
MOCS3
DPM1
MTUS1
RAE1
CCDC97
ZNF524
FIZ1
EIF3F
TOP3A
SMCR8
AXL
PTPRR
DIABLO
ZNF579
METTL25
CCDC59
ZGPAT
ARFRP1
SLC2A4RG
LIME1
ZSCAN22
STON2
NFKBIA
GLTP
SPAG16
SH2B1
MAIP1
HS3ST6
MTO1
TUFM
ZNF830
CCT6B
PHF3
VPS33A
ECHDC1
LGALS8
ZNF2
DPP3
UPK3BL1
FSCN1
BIRC3
KAT5
DOK7
ECH1
DNAJC30
BUD23
ZBTB7C
STMN3
RTEL1
TIMM50
HEMK1
C3orf18
DUX4
RALGDS
GADD45A
PPWD1
CENPK
SCARB1
PTPRU
MUL1
TRIM48
HOXA3
RPS12
ATP6V0D1
AGRP
NGDN
PDCD6IP
MAPKAPK5
QRICH1
RAB3IP
FAM133B
SEC13
PRR3
GNL1
RPL23A
RAB34
GCN1
BAIAP2
RCE1
BCL3
ZNF335
PAXBP1
TRIP4
NVL
ERGIC2
DLC1
TXN2
GFM1
THBS3
MTX1
TIPARP
GTF2H3
EIF2B1
WDR18
PLA2G2E
BNIP1
PHB2
PNO1
MBD6
DDIT3
NUP214
BMS1
LRRC29
RWDD1
ABCC3
ITPKC
COQ8B
C19orf33
ZFP64
PGGT1B
FRG2
TAS1R1
NOL9
SMG7
SETD3
CCNK
SPNS1
ZNF408
ARHGAP1
LANCL2
KLF9
HSPB1
GTF3C5
COLEC11
BRF2
PLA2G2A
SYT12
FOCAD
RXRA
URM1
SKIDA1
CDC6
ASB6
YJU2
CDK12
HSPBP1
BRSK1
FCF1
AREL1
GPSM3
PBX2
USP39
C2orf68
TRMT2A
RANBP1
EIF1AD
BANF1
SYT1
GLCCI1
C7orf65
RBM42
PSME3
ANXA2
TSN
LYPLA1
IQUB
LMNA
TMEM101
PRKG2
KAT8
SEMA3B
TACC1
MIDEAS
EIF3E
TJAP1
HCAR2
TRIM16L
BCAS1
PLEC
MRPL1
MLX
COASY
TBL1XR1
TMEM205
RAB3D
CCDC159
DGAT2
SF3B3
COG4
RRNAD1
ISG20L2
UPK3BL2
LSM5
SEMA4B
NME3
MRPS34
EME2
PDAP1
BUD31
EIF5A2
PLAGL1
ITGA2
PUS10
PEX13
S100A2
NOTCH3
CDK5RAP2
TMEM95
KCTD11
AURKAIP1
ATP6V1C1
PSMG2
CEP76
PDE12
MED6
WDR72
MRPS7
GGA3
MAP3K7
VPS11
POLR3B
UTP20
MACROD1
UVRAG
EXOSC5
BCKDHA
CLPB
PMPCA
ENTR1
C5orf51
GPATCH3
ADGRL1
NUDCD3
NDUFB5
MRPL47
DNAH5
WDR53
FBXO45
PRSS22
ZFHX3
GRK7
UBXN1
RDH5
ITGA7
BLOC1S1
STX1A
PMEPA1
TTC32
BCAR1
FAM162A
CCDC58
MRPL21
IGHMBP2
FIS1
ZBTB7B
MARVELD1
LOC100509620
ANXA3
MYL12B
FOXA2
IER3
FLOT1
BIRC2
LIMA1
DHRS13
ZNF165
STX6
EPB41
MRPS22
TNFRSF12A
THOC6
HCFC1R1
CLDN6
DHX35
MED4
PIM1
AQP5
MUC2
GSR
OAZ3
TBL3
GPC1
TARS2
TCERG1
RNF151
NME1
ATG9B
ABCB8
CDC23
RINT1
FRMD7
C8orf74
RARA
PES1
PPP1R37
KLK6
CDK5RAP1
TMEM123
PIM3
MRPS26
GNRH2
CNPY2
TMEM207
GRWD1
RPL30
UPP1
SSNA1
ANAPC2
BANP
SLX4IP
MKKS
POM121L12
PWP1
ZCCHC4
KMT2D
TAGLN2
ZRANB2
MMP10
MAD2L1BP
YIPF3
POLR1C
TMCO1
GTPBP2
SNRPB
TPST2
HR
EVPLL
PHF5A
ACO2
KMT2A
PRKAR2B
SETD1A
VWA7
TSC1
GFI1B
LRFN4
CDK11B
CDK11A
ARHGAP30
RTF2
FEM1A
MEAK7
SNRPB2
ZNF703
CD63
SEPTIN9
MRPS15
AAAS
DHRS3
RPL7L1
TBC1D17
AKT1S1
OR6B2
NDUFA10
WASHC1
EIF2S1
ATP6V1D
INTS1
COPS7B
MIDN
ANAPC5
ANKK1
RASEF
MCC
TEKT2
ADPRS
PTPN2
MDGA1
NDST1
GTF3C3
KYNU
CAPN14
PIK3C2B
IPO11
SLC25A11
RNF167
RP1L1
MICAL2
TXNL4B
DHX38
PEPD
RARS1
FAM83A
TIMM23
PNKD
SEMA3F
TPRN
TMEM203
NDOR1
KMT5C
RAB40C
PPIL3
NIF3L1
KCNK15
COG2
CCNT1
NCBP2AS2
NCBP2
LTO1
RPS14
DUS2
DDX28
UQCRQ
GDF9
DDX49
COPE
CTTN
TRIM4
DYNC2I2
SBNO1
GSN
MED1
ZNF398
LGALS7B
DNTTIP2
RBX1
NPAS1
TMBIM1
HTRA2
DQX1
ISG20
SLC7A6OS
PRMT7
PLXNB2
MINK1
CLDN4
C11orf86
COX16
ASH2L
NOP53
MTHFR
CLCN6
SART3
ISCU
CSTF1
AURKA
CORO1C
TMEM41A
TCAP
PNMT
PFDN1
SEMA6A
LRRC23
PCID2
CUL4A
TAF6
CNPY4
FAM153B
WDR46
PFDN6
AP5Z1
METTL1
EEF1AKMT3
CYP27B1
LRRC46
MED23
WDR97
MAF1
COPS8
RPS21
PSMD5
HSPA9
PTPN12
MRPL40
HIRA
PTP4A1
ACP3
TPRKB
SPRED2
MAN2C1
TPD52L2
ABHD16B
CWC25
OR2W3
PSMC3
LY6D
OR2T1
ZFPM1
ORAI3
MAGOH
LY6E
ADPGK
ZMAT2
SLC6A2
MRPL48
SSTR5
SPAG9
STK36
RNF25
LIF
TGIF1
NUDT5
CDC123
MUC17
SRP68
KRT17
FADD
GALR2
KPTN
ZNF16
PTAFR
SRD5A1
NSUN2
LONRF3
SSBP1
RHOD
GUCA2A
MCM7
AP4M1
SIGLEC15
C6orf226
JADE2
TRMT112
PRDX5
CWF19L1
MB
NR1H2
KCNJ15
METTL7A
PLD1
SNX16
TMPRSS4
WWC1
ERCC5
C8orf58
UTP3
CCAR2
COLCA2
RAB5IF
C15orf62
GTF2H2
XPC
LSM3
SPINT3
NPIPB3
FOS
WDR24
SMG5
E2F8
TMEM79
TTC6
SKIV2L
NELFE
FOXA1
PARP4
HSPB7
EPS8
SREK1IP1
CWC27
NAPRT
MROH6
PRR12
NDUFA4
ANKMY1
RNPEPL1
ZNF292
ID1
MRPS35
PERM1
SPRYD4
RBM39
TINAGL1
SHC1
CKS1B
SNRPD2
QPCTL
PFDN4
PSG8
TONSL
FTH1
TGFB1
RHCG
PPIH
LOC102723996
ICOSLG
UNC50
COA5
TAF2
ARL8B
XAB2
PCP2
TBCB
POLR2I
OVOL3
ZNF302
CEBPB
ZC3H3
CAPN1
SRSF11
LRRC40
TIPIN
GPRC5A
UPK3B
ELAPOR2
EIF3D
SNRNP70
WBP4
ELF1
TBC1D23
CRYM
SH2D4A
TOMM6
MTHFD1L
MED30
SSH3
UBE2L3
SEC61B
RNF39
AAR2
ZNF384
TRIM31
KMT2E
NFE2
ZNF561
MAP4K1
EIF3K
UBE2M
CHMP2A
COMMD5
USP48
TRIAP1
PRKAR1A
RBM22
NDUFB7
SPDYE14
SPDYE10P
CASTOR2
SLC24A1
RNF40
CCDC189
S100A6
RNF19A
ARFGEF2
PSG9
ZG16B
SMIM10L1
PRH1-TAS2R14
PRH1
CCDC169-SOHLH2
CCDC169
ZNF749
GFM2
OLFML2A
GALK2
COPS2
MRPL30
MITD1
CALML5
FBXO32
MRPL12
MEGF8
HMGA1
TOR1A
TMEM40
ZNF750
TMEM245
ATAD5
GTF2H4
SYNCRIP
LIN52
ALDH6A1
PHF23
ALDH18A1
PDXK
HNRNPA2B1
CBX3
SLC39A10
GET4
WDTC1
EPC2
DDX17
EIF4G2
STRBP
NUDT3
SLC25A25
WASHC2A
NAIF1
GABARAP
SEPTIN7
WASF2
WASHC2C
FRG2C
UBE2Q1
MARCHF9
GPR137
CDK4
BAD
GSK3B
RSF1
AAMDC
MSMO1
DAGLA
RPGRIP1L
FTO
MDM2
FAM72D
FAM72C
PMF1-BGLAP
PMF1
CCDC200
SYNGAP1
CUTA
RPUSD4
FAM118B
CLCN7
SMARCD2
EFNA3
USP49
DDX42
CCDC47
SRSF1
ILF3
SERPINI1
PDCD10
COMMD9
ANGPTL4
GBA
ATP6V1G1
MAN1B1
MACC1
RHOBTB2
SLC35A5
ATG3
OSGEP
APEX1
PTPRF
PGLYRP4
FANCA
MCOLN1
RAD9A
PDGFB
XPO7
WDR74
CLN3
APOBR
HPS5
GTF2H1
INO80C
CEP162
FAM72A
AMDHD2
MFSD1
PPP6R1
ENTPD4
DVL2
LAMA3
PRICKLE1
SLC4A2
CDK5
ZDHHC6
VTI1A
MYCL
WWOX
EIF2D
CELA3B
PMS1
ORMDL1
ST7
PCIF1
SUSD4
SHLD2
GLUD1
UBE2B
CDKL3
PIP4P1
SEPTIN5
INTS10
GP1BB
E2F6
TM2D2
ADAM9
ZNF668
WBP2
DIP2A