ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX017705 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◣ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

SLC22A16
BMPR1B
TMEM216
TMSB4Y
SH3KBP1
PLA2G4A
CNOT6
SPDYE7P
CDC42
HIPK3
MTRNR2L1
SYCP2L
MIB1
CYP27A1
RAPGEF4
HCK
MCC
C22orf31
CELA2A
ATG4D
C1orf198
CCDC112
TPM3
NAAA
ZNF438
SLC25A23
CRB3
NPAS1
LTC4S
TMPRSS11A
PIK3R4
NLRP2B
CEP126
SKIDA1
THAP7
LIMS2
ADAMTS5
NGB
UBASH3A
TMPRSS3
TSGA10
C2orf15
APBB2
SETBP1
PMF1-BGLAP
PMF1
SPEG
IFNA1
ISG15
SGCB
AGRN
CDC42EP1
TAPT1
ENOX1
ZNF784
TBC1D21
ARSA
CCNT1
SLC6A11
TMPRSS11F
HPGDS
GSTO2
PDXP
KLK5
ABR
VPS4A
SCAF4
OPALIN
NKX2-5
FAM178B
SLC25A30
ARHGEF3
TAX1BP1
TRAPPC12
NEUROD2
MCCC1
NFAT5
ACTL6B
CXorf38
MICB
BRINP1
TMEM230
INKA2
MAP1LC3A
NMB
SNX8
SOX2
GPM6A
ZNF770
SLC6A16
SAMD14
NGF
TUSC3
AMBRA1
EEF1AKMT2
ABCG8
ABCG5
PSMB2
CREBZF
SORBS2
AQP11
DAGLB
SZT2
MED8
CARHSP1
DNAJC22
PPFIBP2
NSUN5
PF4
C19orf18
C5orf34
SMIM21
CDC34
PLVAP
KLB
INSR
CD1A
TRIM5
TRIM22
TMEM9
SYNE1
ANKRD30A
ZNF221
ZMYM6
GSTA2
PPP2R5A
RGS6
CD36
OR6B2
NDUFA10
VGLL3
SLC25A19
GTF2H4
MAGEA2B
MAGEA2
ZNF80
ZHX3
ZASP
SAP25
OR51I2
OR11H2
OPHN1
DRP2
C1orf127
LYRM4
FARS2
GSG1
ZNF620
SMIM13
OR10J1
NPM2
CPN2
CHN2
TNRC6A
AKT3
MAK16
DENND5B
SERPINB5
SCOC
CCL26
ARHGAP27
ACVR1C
OGFOD2
HORMAD1
LAPTM4B
SCML1
SPINT2
ATAD3B
PPP1R14A
PHYHIPL
SAT1
SNX7
KLK8
PTCH1
TLCD1
NEK8
GALNT7
SLC25A27
RORA
CYP39A1
SCN2B
UNC45B
SNRNP25
POLR3K
IGFBP6
NCR3LG1
STAU1
TMCO2
UCP2
ZNF367
HOXC13
JAG1
ZNF808
ZNF157
TMC5
TM6SF1
PAM
IFNL1
FBLL1
CYP4F2
COL26A1
ACOT1
ANKRD46
ZNF773
RITA1
ISM2
DDX54
CDKL2
SYN3
LRWD1
ALKBH4
SLC39A14
PAX2
DSTYK
LDLRAD4
TCP11L1
ARFGAP2
CNNM4
UMPS
KRT25
HLA-F
DRC1
HHIPL2
ODF2
GK
TCF12
CCDC153
SQSTM1
GUCA1C
DRAM1
FANCI
IGSF10
CDK15
MFAP5
STYXL1
UPK3BL2
RGL1
ANK2
LENG8
RBM7
C11orf71
SDR39U1
SP8
SRSF6
NAT10
UGT2B4
CCM2
LMTK3
BMS1
EOMES
PSMD12
PITRM1
OR52K2
RNF152
ATP2A3
PRDM8
ABAT
GRPEL2
MIIP
TEX11
ST8SIA5
SMS
SDR42E2
RIOX2
RBMX2
PLP2
PDCD1LG2
MAPK8IP2
HPX
GSTM2
CBSL
CBS
CBLL2
CARD14
UNKL
SLC39A5
PNMA8B
DDX58
ZSWIM4
ZNF417
LONP1
CATSPERD
NUP85
GDPD1
NDST2
PSMD4
TBC1D22A
UBE2K
H4C13
H3C11
TRIP12
MSX1
CDH23
MKRN2OS
SPDYE13
AK4
ZCCHC12
SPDYE9
SPDYE8
SPDYE21
SPDYE15
SPDYE11
SPATA31D3
SHCBP1L
SACS
PDE1B
PDCL2
NR5A1
NLRX1
LIN28A
HSD3B1
GAL3ST2
FAM25G
FAM25C
EIF2AK2
DACT2
CDHR1
ANXA8
AMTN
MAPK9
MTRNR2L10
RTL8C
MTRNR2L8
RGPD2
RGPD1
SUPT20HL2
USP36
ARID3B
IKZF3
MYEOV
MTRNR2L2
MSH3
DHFR
HEXA
MAMDC2
MRPL11
PHF23
GRB7
LAMP1
ALDH18A1
PDXK
HNRNPA2B1
CBX3
SLC39A10
GET4
WDTC1
SLC45A4
AP5Z1
EPC2
DDX17
EIF4G2
DUX4
STRBP
NUDT3
TMEM199
POLDIP2
SLC25A25
WASHC2A
NAIF1
GABARAP
SEPTIN7
TES
KAT5
WASF2
MRPL45
ERAL1
WASHC2C
ERCC1
SPATA25
NEURL2
CTSA
FRG2C
UBE2Q1
SFSWAP
MARCHF9
GPR137
CDK4
BAD
POLR2J3
HAGH
FAHD1
SERPIND1
GSK3B
NAGPA
SPNS1
UVRAG
ATP6V0D1
AGRP
CD300LF
RSF1
AAMDC
MUC3A
MSMO1
CRBN
RBBP8NL
GRHL2
UBE3B
KCTD10
DAGLA
RPGRIP1L
FTO
TRMO
RBM48
PEX1
MTRNR2L9
PSMD3
MTBP
MRPL13
SUPT7L
SLC4A1AP
MDM2
RALGDS
FAM72D
FAM72C
SUMF1
SKIL
TXNRD1
IL1R1
ZBTB7B
CCDC200
RAE1
SLC35B1
MTHFR
SYNGAP1
CUTA
STARD3
RPUSD4
FAM118B
BCL3
HES1
C8orf33
TOMM22
CLCN7
SMARCD2
EFNA3
USP49
C1orf174
ZZZ3
DDX42
CCDC47
SRSF1
TBL1X
ISY1-RAB43
ISY1
ILF3
ABCC10
TRIB1
ASB2
TRIM48
POLR3F
DZANK1
SOCS2
RBBP5
CLCN6
SERPINI1
PDCD10
COMMD9
ANGPTL4
STX16
RAPGEF3
GBA
STAT6
TSR3
GNPTG
LZTR1
ATP6V1G1
VPS50
HEPACAM2
MAN1B1
MACC1
UNC13D
ATF3
BHLHE40
CD55
POLR2J2
APOBEC3B
GADD45A
VPS33A
PGAP3
ERBB2
ESRP2
RHOBTB2
RARB
MIEN1
ZNF335
TMC7
SEPTIN9
POLR2J
SLC35A5
ATG3
OSGEP
APEX1
IRF2BP2
TRMT2A
RANBP1
PTPRF
METTL25
CCDC59
IDH3B
PSMB7
FRG2
SUPT6H
SDF2
PGLYRP4
CARD16
FANCA
CLPTM1
AURKAIP1
SUPV3L1
TET3
GOLM2
TFPT
PRPF31
SPINK1
SNRPE
SMN2
SMN1
MCOLN1
YJU2
GSR
RDH5
ITGA7
BLOC1S1
ERICH4
DMAC2
TRA2B
VIRMA
RAD9A
RGS3
RPS26
C5orf51
PDGFB
SALL4
ELFN2
WASHC5
NSMCE2
TBRG4
ZNF408
LGALS8
ARHGAP1
MOCS3
DPM1
TRAF4
UPP1
XPO7
WDR74
SLC25A53
MRTO4
EMC1
CYP2A13
NUP214
PDAP1
BUD31
SRI
NME1
YAP1
CLN3
APOBR
TSFM
GET3
HPS5
GTF2H1
TOP3A
SMCR8
PAXBP1
SENP1
PFKM
SLC25A45
FRMD8
CDKAL1
INO80C
ANXA2
GLTP
CEP162
TMEM205
RAB3D
IRF2BPL
CCDC159
FAM72A
CASC3
KMT2E
ATP5MF-PTCD1
ATP5MF
AMDHD2
SAP30BP
RECQL5
TRMT1
NACC1
SLIRP
ALKBH1
MMP13
MFSD1
FLOT2
PPP6R1
DOK7
ZSCAN22
U2SURP
ENTPD4
RARG
ZNF165
DVL2
LAMA3
TXN2
ZNF383
AXL
PRICKLE1
SPAG16
CDK12
ZSCAN25
TAS1R1
NOL9
SLC4A2
CDK5
C16orf91
ZBTB7C
IER3
FLOT1
ZDHHC6
VTI1A
BIRC2
GATB
MYCL
ZBTB45
WWOX
DDX41
ATAD2
TMEM40
NDUFA2
IK
EIF2D
SMG7
GFM1
CCDC88B
CELA3B
PMS1
ORMDL1
KRR1
ZMYND8
ST7
JMJD7-PLA2G4B
JMJD7
RTF2
NDUFA4
VAC14
SLC25A11
RNF167
LIMA1
PCIF1
SUSD4
MRPS15
EPHB3
SHLD2
GLUD1
HUS1
UBE2B
CDKL3
KAT8
PIP4P1
FAM83A
PHAX
KLF10
DNAJC11
RAD51AP1
ECH1
C12orf4
NAPB
SEPTIN5
INTS10
GP1BB
SPRED2
E2F6
ZNF576
IRGQ
TM2D2
ADAM9
ZNF668
WBP2
SSBP1
DIP2A
LRRC47
ARHGAP32
STAU2
MEMO1
UBE3C
NUP107
ARID5B
CCDC97
MOB1B
COL23A1
STX1A
SUPT4H1
MEF2C
UBE2I
RRP15
SUMO3
NGDN
KANSL3
FER1L5
PTBP1
PSME3
TRIP4
TJP2
TNC
HNRNPH2
GLA
ITGB3BP
EFCAB7
FSCN1
BANP
SEMA3B
KCNMA1
UBAP2L
C1orf43
C19orf33
CALML5
THOP1
SGTA
PASD1
USP30
PPWD1
CENPK
WDR62
THAP8
MRPS7
GGA3
THEMIS2
ATG9B
ABCB8
UBQLN1
TPP1
ETV4
BIRC3
CMIP
B4GALT2
SH3GL1
CHAF1A
SLC33A1
THRAP3
GPATCH3
LANCL2
ARID2
BAIAP2
CLSTN1
ATG14
EIF5A2
RPTOR
DHX35
ANKS6
ELP3
EPS8
MAGEB10
HM13
ZNF2
SPATC1L
DAZAP1
BSG
NDUFS7
MIER1
SSH1
XRCC5
ANKMY1
SEC13
TBC1D30
GNS
PSMD1
SLK
LRRC29
CACTIN
ADGRB3
PLD1
DENR
ACVR1B
LPCAT3
DHRS13
VWA7
FGGY
STMN3
RTEL1
MRPS11
MRPL46
MAP3K7
TMEM116
ERP29
ADGRL1
ALG6
TRIM16L
IGLL5
VPS11
SLC6A9
TNNC2
SNX21
MEOX1
SUMO2
NUDCD3
ECHDC1
NOP16
HIGD2A
AAAS
KLF9
SCAMP5
NFE2
LSG1
OAZ3
TIMM23
ATP6V0B
BCAS1
TSN
KDM7A
DICER1
ZNF497
ADAM23
TIPARP
DUSP6
DDX23
PLAGL1
BAX
OTUD7A
FAIM
TNPO3
VGLL4
RHOD
ZNF524
KDM3A
FIZ1
NCBP2AS2
NCBP2
PDE4DIP
LMAN2
RXRA
STRA6
SH2B1
PLEC
NOL8
CENPP
TRUB2
GPRC5A
COQ4
RMND1
ARMT1
ZCCHC4
EIF3F
PRKRIP1
PSMD5
REEP4
FAM72B
TGIF1
SMARCA4
SEC22B
METTL1
EEF1AKMT3
CYP27B1
EIF1AD
DPP3
BANF1
PMEPA1
SF3A3
RNPEPL1
SPHK2
RPL18
PTPRR
FAM83E
DDX46
UBE2L3
STX6
ZNF507
NDUFAB1
KRT80
DNAJC30
BUD23
PRMT3
RABGAP1L
CORO7
PYCR2
QRICH1
STON2
FLYWCH1
DHRS3
TEX46
SERP1
KDM1A
EIF2A
SYNCRIP
BLOC1S4
LTO1
BAHCC1
NPEPPS
ATP6V1C1
TIMM22
NAPA
TSC1
GFI1B
HDAC6
ITGA2
RARA
ATP6V1H
PUS10
PEX13
BAG6
APOM
HSPB1
NEXN
METTL2A
PDCD6IP
SART3
RRAGC
ISCU
DGAT2
TMEM18
SBK1
UPK3B
TPRN
TMEM203
NDOR1
EIF2S1
ATP6V1D
LARP1
SMG8
NFKBIA
SCYL3
PRAME
AP2A2
ZGPAT
PPP5D1
NSD1
CALM3
ARFRP1
PLXNB2
PHF19
KMT5B
KDM4C
TTC32
RBM39
TMEM59
TCEANC2
TFAP2C
MAIP1
AGTPBP1
MAN2C1
INTS1
NOXO1
GFER
PARD6B
MYL12A
TFDP1
HOOK2
ZNF830
CCT6B
CHMP7
BCAR1
TMCC3
MDH2
DUSP2
MTUS1
COX16
FEM1A
PECAM1
GRHL1
ZNF33B
NDUFB5
MRPL47
PRKCA
TMCC2
LUC7L2
MRPL1
FOS
CAPRIN2
SFXN1
KLHL12
EIF3H
LRFN4
LYPLA1
BRPF1
PSMG2
CEP76
MAN2A2
SAMD10
PRPF6
KDSR
DRC7
PEAK1
HMG20A
NFU1
TINAGL1
LFNG
EPB41
RTN4
NUF2
CENPBD1
C8orf58
NR5A2
METTL2B
NSF
MEAK7
MARVELD1
BNIP1
RNASEK
LRRC23
C17orf49
SAP30
NVL