ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457146 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◣ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

PDXK
ALDH18A1
WDTC1
SLC39A10
DDX17
STRBP
EIF4G2
SLC25A25
NAIF1
EPC2
HNRNPA2B1
CBX3
WASF2
SEPTIN7
PHF23
GABARAP
NUDT3
GSK3B
GPR137
BAD
RSF1
AAMDC
ARID3B
RPGRIP1L
FTO
FAM72D
FAM72C
MSMO1
USP49
SRSF1
DDX42
CCDC47
MAN1B1
SERPINI1
PDCD10
RHOBTB2
MDM2
DAGLA
PGLYRP4
SMARCD2
SERPIND1
SEPTIN5
GP1BB
FANCA
XPO7
FAM72A
WBP2
PTPRF
PMS1
ORMDL1
MEMO1
MOB1B
MTRNR2L1
AURKAIP1
WWOX
INO80C
DUX4
MAN2A2
WNK1
PPP6R1
NFU1
CAPRIN2
DRC7
INTS10
TMEM59
TCEANC2
PRAME
PHF19
FAM72B
SLC6A9
TRIM67
MACC1
DICER1
TMEM72
BACH2
DENR
SMCO1
E2F6
RTN4
YJU2
PRKAB1
AIFM1
ADGRL1
CDK12
ERMN
FRG2C
CSTF2
MGAT5
EPB41
KANSL3
FER1L5
ZNF33B
RFX1
CFAP36
PSMD5
TBL1X
CMIP
KIAA1586
MARCHF2
TJP3
TRUB2
COQ4
SLC45A3
CLUL1
PI16
HDAC6
SLC4A1
ZNF77
TRIM37
CEP43
ARMC8
CTBS
NFE2
ZNF347
NCAPD2
MRPL51
RNF223
PCIF1
ZNF451
SYT7
KMT2E
NEXN
XRCC5
VIM
BCL3
ZBTB7B
KDSR
SSH1
TRIM63
ABCB10
NR4A1
ZNF718
ZNF595
MAP3K1
UBE2F
WDR74
TNPO3
SPINK4
SCN9A
THEMIS2
KLHL22
NXT2
GYPE
MFSD12
CENPF
PAXBP1
IL1R1
GLIPR1L1
CAPS2
TMEM120A
VWA7
BIRC2
CASS4
KDM3A
GTF3C2
HSF5
ZNF497
STK11
VILL
LAPTM4B
PLSCR1
TANGO2
SNAI3
PRDM11
ARID1A
ATAD2
ALAS2
BTNL10
LZTR1
ANKRD33
CASC3
CCDC88B
GBA
EML2
PTEN
KLLN
ZNF408
ARHGAP1
TCP11L2
PTCD3
POLR1A
TNFAIP8
ADAMTSL4
CHCHD2
TSPAN32
C11orf21
PPM1F
ZNF609
FKBP8
SLC43A3
GYPB
P2RX6
HPN
NUP214
RCHY1
NR4A3
TMEM18
MFAP3L
CD300LF
RPS11
GUCA1B
H4C4
H2BC6
MAD1L1
TPM4
TSC1
GFI1B
TM7SF3
MED21
PYCR2
WDR89
CRKL
H4C8
NARF
ZNF165
NDUFS7
GNB2
DNAJB2
SLC26A8
MAPK14
TNFAIP3
ILF2
EIF2AK1
ETFB
PSIP1
DIP2A
DNAJB12
FBXW11
TMOD1
MBD2
PRDX1
SLFN14
FUT10
CCDC200
PPP1R14D
RNF217
GOLGA8B
BAG6
APOM
ALOX12
USP11
PPIL2
AP1G1
HMOX1
ARID2
H1-0
GCAT
NRCAM
SIRT1
PLSCR2
METTL1
EEF1AKMT3
CYP27B1
KRT8
KLHL20
FOXN1
C3orf86
CLK3
TUBGCP5
BCL6
KRBA1
GTF2H4
ASCC1
ANAPC16
SDE2
CHSY1
FAM83A
PIK3R3
PDE4C
CXCL6
ZDHHC6
VTI1A
RINL
SLC35E2A
NOS3
UFD1
CDC45
SAMD4A
HDAC11
RTBDN
MAST1
CCNI
RBPJ
ST6GAL1
NOP16
HIGD2A
BCL7B
PRPF38A
ORC1
PXT1
KCTD20
BTG2
YIF1B
KCNK6
EIF4A2
GDE1
CCP110
SUPV3L1
FKBPL
ATF6B
TMEM191C
HTR4
UCP3
MFSD2B
THAP7
SPIDR
WASHC2C
FZD1
HECTD3
POLR2J3
SNRPE
BRWD1
MSANTD1
UBE3B
KCTD10
CORO1C
KLHDC9
ATP2C1
NPHS1
KIRREL2
BSG
BNIP3L
ERCC6L2
TUBB4B
TIMM10B
ERMAP
TAF10
ANKFY1
CNKSR3
CLPTM1
NBEAL2
IRF2BP2
PPOX
SS18L2
SEC22C
GOLM2
LYL1
BRPF1
ASIC4
ADAMTS14
SOCS2
NDUFS3
KBTBD4
DYNC2I1
PPP1R15A
PLEKHA4
ZNF510
FAM110A
FABP6
CACTIN
RBM39
RAB33B
TNFRSF1A
IL1RL1
ID2
TOM1L2
DRC3
TUBE1
FAM229B
TRAPPC9
LSM2
BAIAP2
TMEM107
IL13
C5AR1
PIH1D2
NKAPD1
ALG14
SEC31A
RIPOR3
THAP9
ZNF74
GP6
CCM2
QRICH1
PITHD1
UBE2L3
WWP1
PRKCI
REXO4
ADAMTS13
UBC
HEMGN
RBBP5
VPS52
RPS18
B3GALT4
HEPH
TXN2
UBE2B
CDKL3
SPATA24
SLC2A1
DDIT4
TFR2
SLC25A11
RNF167
JMJD1C
SLC35A4
APBB3
TTC12
RTN3
CCDC97
RPA2
VPS13B
GUK1
RSAD2
GJC2
CSTF2T
PSPN
ALKBH7
TMEM69
GPBP1L1
FOXJ1
SH2B1
H4C14
RPP25
ITGB3BP
EFCAB7
KLHL18
KIF9
SF3A3
NOL8
CENPP
INKA2
DDX20
ADAR
OBSL1
INHA
RNFT1
GABPB2
C10orf71
MRPL11
SQSTM1
LPCAT3
UTP18
MBTD1
SLC25A17
MAP1LC3B2
STBD1
PCNT
C21orf58
KRTAP10-6
RGS20
DDC
ZMIZ1
PAK1IP1
C6orf52
DGCR8
MARCHF7
WDR83OS
WDR83
MAN2B1
FAM53C
CDC25C
RAB42
CA1
USP3
POLA1
CTPS1
HMBS
TTC26
HEXIM2
MEST
ATF7-NPFF
ATF7
EGFL7
NPL
HAPLN2
VAT1
RND2
MST1
PTPN12
PDE7A
EZH1
RRN3
C1orf159
BTBD10
IQCH
AAGAB
ATF3
GOLGA3
MED15
PLK3
CCRL2
IREB2
RNF168
RPS26
ZMYND8
SLC33A1
EIF1AD
BANF1
PRR5
COQ10B
RCSD1
TBX18
STAT6
TRIM69
TCFL5
PSMD10
ATG4A
SPATC1L
STX1A
KCNH2
CDC5L
PARK7
NLGN3
TIPRL
ISY1-RAB43
ISY1
FAM210B
PLAAT2
HOXB9
MTBP
MRPL13
KCNJ11
SUPT7L
SLC4A1AP
TRMT2A
RANBP1
AGPAT1
MRPL54
APBA3
CYB561D1
C9orf16
ECH1
NYAP1
NEU1
C2orf50
BAHCC1
H4C3
H1-6
PPARD
NME1
GDAP1
TXNIP
ATP8B2
AQP10
BAZ1B
PRRC2A
AIF1
SMG7
ACSF3
USP6NL
PISD
PSME3
CALM2
VMAC
NDUFA11
ABCF1
TOP3B
HERC1
ERVH48-1
LMAN2
TPR
ODR4
ATAD3A
DIPK1A
POLD4
RPL11
MYBPHL
PPP1R12A
GTF2B
SLC25A42
METTL25
CCDC59
CCNG2
CFAP20
CRB1
DAGLB
RAB33A
GTF2IRD2
GTF2IRD2B
TRMT10A
MTTP
ZNF467
SAT1
GAS8
DBNDD1
ETFRF1
CFAP94
TRIB1
TRAPPC4
RPS25
DPEP3
ICAM2
C2orf88
TMCO6
S100Z
LRRIQ3
FPGT-TNNI3K
FPGT
CD2
ZC3HC1
MRPL40
HIRA
DSTYK
EPS15
ZNF556
FRG2
DDX41
FDXACB1
C11orf1
TMEM87B
DNAJC9
ATG101
KSR1
ZCCHC14
PIGQ
NHLRC4
BSDC1
SH3BGR
LCA5L
HUS1B
RRP15
MRPL27
EME1
KLF3
RUNX1T1
YARS2
YARS1
S100PBP
JOSD2
ASPDH
E2F1
TMCC2
UTP3
TUBB
MDC1
RBMX
GAGE2B
PPP4R3B
C1orf226
TMC8
TMC6
IQUB
RHOT1
MTHFR
MYL12A
MRPL48
H2AZ2
DHDH
EVA1B
NUP210L
AP1M1
NCOA4
ATF4
ZBTB45
SSBP1
CEP85L
ZNF474
NR1H3
ACP2
DGCR2
ZNF576
IRGQ
COMT
SSBP2
PAFAH2
RGL2
TMEM9
PDAP1
BUD31
ST7
MAD2L1BP
GTPBP2
H4C11
TRIM6-TRIM34
TRIM6
TMEM183A
CTR9
YPEL4
PRPSAP1
IL19
SCMH1
TLE2
IL10
TAS1R1
NOL9
ETFA
ZNF813
ZNF335
MAPKAPK3
CISH
TNFRSF1B
TRIB3
TEX46
KDM1A
RCOR3
USP9X
TUBB1
HDC
TCTEX1D4
BTBD19
HYLS1
GSE1
TEAD2
DKKL1
PPM1D
ARF3
LARS2
IFT172
THEM4
MAMSTR
LRRC23
SELPLG
SELENOH
ISG20
DHH
FAM156B
FAM156A
NOCT
C19orf25
MAGT1
COX7B
TRMO
NDUFB3
FAM126B
AQP1
RIMBP3C
RIMBP3B
TMBIM1
PLS1
CYTH2
ZNF276
VPS9D1
HUS1
SPRED2
PRORP
PPP2R3C
MICOS10-NBL1
MICOS10
USP32
PDCD2L
RALGDS
CDKN1A
BRD7
MGRN1
HNRNPH2
GLA
SMG5
TMEM79
IARS2
BPNT1
C5orf51
CITED4
LIPC
GYPA
TFRC
CYP26A1
HNRNPH1
RAP1A
DLAT
KCNAB2
CYP51A1
ZSCAN25
PFDN4
YDJC
CCDC116
PCGF5
KPTN
FUS
PPP2R5A
RPS9
MTHFD1L
IMPA1
FBLN2
PHF12
C6orf226
NRL
DCAF11
PUS7L
IRAK4
RABEP2
COL14A1
SLC46A3
RMND5B
DUSP1
PRR19
PAFAH1B3
TRIM5
TRIM22
DAB2
CTDSPL2
PSRC1
MTOR
STX6
ZSCAN31
KIF2C
ATG16L2
SLC45A4
TMEM167B
NEK2
ARCN1
STMP1
MYADM
SPTBN4
NUP205
ABHD10
BLVRB
MLX
COASY
CLTCL1
USP54
PRKAR1B
SPRING1
RNFT2
TNFAIP8L1
STARD10
RFC5
CAT
CCNT1
FAM200B
TMEM222
STK40
SAMD8
C16orf46
MDM4
TIMM10
DPY19L4
CDIPT
RFX5
HCFC2
GLT8D2
RIMBP3
HLTF
GCNT1
RPS14
DOHH
ZBTB40
SRFBP1
TMEM43
CHCHD4
PLA2G6
STXBP4
COX11
GCLC
KDM5C
GRAP2
TRIP4
PPIH
HPCAL1
SDF2L1
OTUD3
KIF23
KAT5
TBC1D30
GNS
ZNF524
FIZ1
NNMT
VAMP5
DNAJC28
NUP155
ZCCHC24
TMEM191B
PNISR
AGBL3
KRT18
MAPK1
GPR84
GPX1
L3MBTL3
MTIF2
ACSL1
SKIV2L
NELFE
PPIL4
WDR5
DUSP18
CENPN
TES
BMS1
ZMPSTE24
SLC38A8
PDXDC1
PTGES2
LRRC61
FBXO46
MRPS15
ELOVL6
FAM83F
MUC3A
TMEM205
RAB3D
CCDC159
RAD21
IKBKG
G6PD
TSC22D2
OR52A1
SLC25A37
GAL3ST4
PTMS
NSUN4
SHB
LSR
TMPPE
GLB1
SFSWAP
RBM28
UGCG
AHCTF1
ANO10
ABHD5
TRIM28
C8orf58
CCAR2
HEMK1
C3orf18
LONP1
CATSPERD
MAP3K8
CXCR5
ZBTB21
H3C13
H2BC18
SNX24
GPR37L1
APRT
KDM7A
COMMD4
COPS4
SETD1A
DCLRE1B
AP4B1
FLVCR1
ZKSCAN2
SPDEF
LENG9
MAP1LC3B
ILKAP
FBXO31
ESYT1
AGPAT3
YTHDF2
ATP6V1F
ASXL1
INTS6L
FAM104B
ATP13A3
UBE2I
EOLA1
AHI1
EOLA2
H4C12
MELTF
NUDCD3
BMF
OCIAD1
DNAJB6
EIF2D
LARP1
UNKL
TUT1
NFKBIL1
DDX39B
ATP6V1G2
ETFDH
C4orf46
CYP21A2
NRSN2
CELA3B
C19orf48
ABHD11
NUMBL
TFPT
PRPF31
SEC22B
ZBTB8OS
RBBP4
GALK2
COPS2
BCKDK
PIGM
CDH23
TTC39A
TARDBP
GTPBP3
ANO8
ERCC1
PPP1R37
GSDMD
ZCWPW1
MEPCE
S100A13
CHTOP
DDX18
SLC6A19
NUDT9
IPO13
GAGE12J
GAGE12G
ECM1
RIOK1
CAGE1
SIRT3
RELA
PSMD13
FAM214B