ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976677 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◣ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
GRB7
MRPL11
MAMDC2
MTRNR2L8
SLC45A4
MTRNR2L2
MSH3
DHFR
ARID3B
ERAL1
TMEM199
POLDIP2
RBBP8NL
GRHL2
SFSWAP
TES
RAPGEF3
MTRNR2L1
NAGPA
RBM48
PEX1
C1orf174
SLC35B1
C8orf33
CD300LF
ISY1-RAB43
ISY1
MTBP
MRPL13
MRPL45
CRBN
STARD3
ASB2
TOMM22
ELFN2
NAPB
GOLM2
SPINK1
PSMD3
TMC7
UNC13D
PGAP3
ERBB2
ZDHHC6
VTI1A
STX16
IDH3B
MIEN1
VPS50
HEPACAM2
SUPT7L
SLC4A1AP
TXNRD1
RPTOR
SMN2
SMN1
GSR
SERPIND1
ANXA2
CARD16
ABCC10
SKIL
SQSTM1
SALL4
PSMB7
BCL3
GPATCH3
FLOT2
HES1
APOBEC3B
SUPT6H
SDF2
PLD1
UBE3B
KCTD10
TET3
CSF3R
CDKAL1
POLR2J3
IER3
FLOT1
PLA2G2E
IL1R1
GLTP
ZBTB7C
EIF2D
POLR2J
RBBP5
ESRP2
RGPD2
RGPD1
TRIB1
EPHB3
C19orf33
POLR3F
DZANK1
BHLHE40
RARB
MTRNR2L9
TRIM16L
LAMP1
SLC25A45
FRMD8
EIF5A2
TSR3
GNPTG
GATB
PMEPA1
CD55
ZNF398
JMJD7-PLA2G4B
JMJD7
ANGPTL4
BANP
ZZZ3
SNRPE
RAD51AP1
C12orf4
CYP2A13
SPAG16
TAS1R1
NOL9
PTPRR
TRMT2A
RANBP1
PLAGL1
NDUFAB1
SOCS2
TRAF4
NGDN
YAP1
KMT5B
ATG9B
ABCB8
ATF3
MRTO4
EMC1
SAP30BP
RECQL5
GET3
THAP7
SPHK2
RPL18
FAM83E
WASHC5
NSMCE2
SENP1
PFKM
CLPTM1
U2SURP
DHRS3
HAGH
FAHD1
EIF3F
TMBIM1
DNAJC30
BUD23
MTUS1
MOCS3
DPM1
PECAM1
ERICH4
DMAC2
WDR53
FBXO45
PKP2
COLEC12
POLR2J2
TIMM23
ZNF335
METTL25
CCDC59
TSFM
TJP2
TFAP2C
NKD2
SLC25A53
KLF10
BIRC3
EIF3H
ZNF830
CCT6B
LANCL2
PLEC
E2F8
SEMA5B
RTF2
STX1A
HEXA
DDX41
STX6
MMP10
CDC6
ZSCAN22
TSN
URM1
OPA1
PRKRIP1
MARVELD1
IRF2BPL
ERP27
SPNS1
ZNF383
C16orf91
FAIM
RHOD
RGS3
STON2
ERCC1
ZBTB7B
OAZ3
RPS26
SEPTIN9
DUS2
DDX28
EMC4
IGFL1
PES1
REXO1
TOP3A
SMCR8
ZNF165
SPATA25
NEURL2
CTSA
ZSCAN25
TPRN
TMEM203
NDOR1
GSDMD
ELP5
CTDNEP1
KLF6
KMT2D
REEP4
TBRG4
AXL
FAM83A
MEAK7
NUP107
ITGB3BP
EFCAB7
GTF2H3
EIF2B1
EVPLL
SYNCRIP
GADD45A
BRPF1
JRK
HR
COMT
DUSP6
ITGA2
COPZ1
ATP6V1G1
ATP5MF-PTCD1
ATP5MF
ZBTB45
ATG14
NME1
KRT80
STAT6
LAMA3
SEMA3B
UVRAG
SMG8
RAB3IP
CIDEA
NRDE2
LZTR1
SF3B3
COG4
EIF4A2
NOTCH3
GOLGA3
TIMM21
FBXO15
SRI
TMEM205
RAB3D
CCDC159
LTO1
UBC
SREK1IP1
CWC27
LRMDA
AGAP3
HUS1
ANKMY1
RNPEPL1
GTF3C5
BRIX1
KIFC2
CYHR1
ELAPOR2
COPS3
TRA2B
DPP3
FAM162A
CCDC58
NOL12
TFPT
PRPF31
BCAS1
TINAGL1
MMP13
CCNT1
SUSD1
NOP16
HIGD2A
METTL1
EEF1AKMT3
CYP27B1
NDUFA9
AKAP3
RNF39
TRMT1
NACC1
KAT8
SYT1
CBLC
NFKBIA
HSPBP1
BRSK1
HACD2
CHRM3
TIMM23B
PARG
IKBKB
MRPS7
GGA3
ELP3
STMN3
RTEL1
LSG1
NPAS2
LGALS8
NUDCD3
ZGPAT
ARFRP1
NDUFB3
FAM126B
COLEC11
RALGDS
ALDH3A1
TIPARP
GABRR1
OXNAD1
DPH3
TRIM48
VPS33A
CCDC174
EFR3A
DUSP2
ZNF260
SART3
ISCU
SLC24A1
GPRC5A
NFE2
LRRC23
OR2W3
PRR15
ECHDC1
TCERG1
CLDN9
SUMF1
METTL2A
IQUB
APOBEC3H
TXN2
RWDD1
MTHFD1L
NR2F1
TRIM17
PPWD1
CENPK
ALDH3B2
IFI16
UPP1
PLA2G2A
MTA3
KCNG3
PDAP1
BUD31
CDK12
DCTN6
DDX46
ABT1
MUC3A
METTL2B
EXOSC5
BCKDHA
SLX4IP
MKKS
IPO11
RNF40
CCDC189
NUP214
EIF1AD
BANF1
GINS1
ATP5MG
RTN4IP1
QRSL1
APOBEC4
SUPT4H1
MAP3K7
UPK3B
TRMO
COPS7B
C5orf51
PAXBP1
GFM1
PLEKHH2
XAB2
PCP2
CLDN4
LIPK
SCRN2
INTS1
FEM1A
ANKK1
GSN
TNRC18
CCDC97
SLIRP
ALKBH1
TTC31
CCDC142
PHB2
ZP3
TRIAP1
PRKAR2B
ZNF408
ARHGAP1
ATAD2
STEAP3
VAC14
TOMM6
NDUFS3
KBTBD4
TRIM6-TRIM34
TRIM6
PRICKLE4
FRS3
MRPS11
MRPL46
GLCCI1
NDUFA2
IK
ZNF2
TSC1
GFI1B
DNAH5
FAM98B
TBL3
RNF151
ZFHX3
LY6D
PIM1
HABP2
LTBR
CEBPA
CACTIN
GUCA2A
NCAPH2
LMF2
TMUB1
FASTK
DTX4
RARG
DNAJC11
LRRC29
FOS
MB
MFSD10
ZBTB20
NPAS3
FGF1
MRPS15
CENPBD1
MRPS33
PHLDB2
SLC25A51
TOX2
TAF2
TRIP4
VGLL4
FLRT2
IRF2BP2
MED1
FAM184A
TBCK
AIMP1
PLEKHA7
KRR1
CALML5
PDCD6IP
TAGLN2
EDARADD
PSG9
AAR2
FBXO11
MBD6
DDIT3
PFN1
ENO3
ATF6
IP6K3
PSME3
RXRA
SAMD10
PRPF6
MINK1
TRIM55
CCND3
TAF8
ZBTB46
PRKG2
POU5F1
DOK7
SERP1
EIF2A
SLC2A4RG
LIME1
MAPKAPK5
BRF2
ASH2L
SCRN1
BMS1
LMAN2
GRK7
PTMS
PDLIM2
HIVEP2
DNAJC19
PAN2
IL23A
CDC42EP5
BNIP1
TRIM29
GTF2H4
MCC
HCAR2
NDUFB5
MRPL47
TARS2
ALG10
MUC20
VWCE
TMX2
MED19
SUPV3L1
STYXL1
MDH2
ZNF17
INO80D
NDRG1
TARBP2
MAP3K12
EHF
FSCN1
BAIAP2
NVL
CAPN14
LMNA
ANXA3
METTL6
EAF1
DUX4
HSPB1
MAN2C1
GPC1
NUP54
ZFAT
HERC5
DOHH
MED4
EPS8
DDX23
RPS11
IGSF10
USP30
UBQLN1
AAAS
NCBP2AS2
NCBP2
NAPRT
MROH6
DHRS13
AGTPBP1
WDR72
ICE1
WDR75
ZKSCAN4
ANP32A
PIKFYVE
FUCA1
KDM3A
PTK2
TMEM242
TLE3
MCM7
AP4M1
ADAMTSL4
MED18
MPPED2
ZRANB2
BTNL8
PSMB6
EPHX1
ANKRD22
EPN3
RPL26L1
SGMS2
MRPS35
ARL14EPL
GOSR1
PRKAR1A
ARL1
KIAA1217
PHAX
ZNF497
LZTS2
SEMA3E
CCDC192
CEP162
ZC3HC1
MRPL21
IGHMBP2
PUM2
CWC25
RASEF
SENP2
TENT5B
KLF9
BAG6
APOM
KAT6A
PHF12
WDR83OS
WDR83
MAN2B1
SLC52A3
CCDC88B
CNPY2
VILL
SLC9A1
LYRM4
FARS2
SLC12A4
SLC26A11
STAM
ORMDL3
TSPAN16
UBE2L3
RPS14
PPIH
VPS52
RPS18
BCL6
COPS4
DLC1
PTPN14
NAMPT
FAM153B
RAE1
DIABLO
TNFAIP1
IFT20
PSMD12
LCMT2
ADAL
EXD2
CPT1A
SNRPC
GGA1
MUC2
KAT5
SEC13
LOC100509620
MAPKAPK3
SMG5
CISH
TMEM79
MAP2K3
LOC100129484
AP5Z1
ZMPSTE24
RBM42
PUF60
GPBP1
MDGA1
SDHC
MPZ
WASHC2A
RDH5
ITGA7
BLOC1S1
BCAR1
ZNF3
PNO1
C12orf43
XPNPEP3
ST13
DNAJB7
LIMA1
RPL23A
RAB34
TMEM207
MRPL40
HIRA
DSTYK
UBOX5
FASTKD5
METTL3
SPTLC1
MLLT6
PSMD1
PLXNB2
MYL12A
MED23
TPST2
RPL7L1
RPS21
PSMD6
TRMT61B
NSFL1C
ASAP1
CMIP
C19orf48
C7orf65
RBX1
RAB24
PRELID1
HIRIP3
TSR2
CATSPER2
UPK1B
ARID5B
SSNA1
ANAPC2
RPS12
PIK3C2B
WDR24
PROSER1
NHLRC3
EIF3E
FRMD7
DOLPP1
ARID2
DGAT2
REXO4
ADAMTS13
OBSL1
INHA
ZNF256
FUT1
FGF21
ZNF703
MRM3
GLOD4
SMG7
ID1
ALDOA
LONP1
CATSPERD
SMYD3
KMT2A
OR6B2
NDUFA10
MAGEA2B
MAGEA2
POLD4
MRPS10
ZMYND8
C8orf58
CCAR2
TRIQK
TMEM41A
BCL9
TEFM
CDC23
PLEKHG6
SEMA3F
XDH
TGFB1
RPL13A
NUFIP1
GPALPP1
PNKD
POLE3
C9orf43
ADSS1
ZFPL1
TMEM262
CDCA5
SLC11A2
TMEM40
TMEM69
GPBP1L1
DGCR6L
EPPK1
SLCO1A2
FGR
NPIPB11
GCN1
EPYC
SYT12
RBM19
BBS1
PALB2
DCTN5
KRT17
PSCA
PIM3
SRRT
TSR1
SGSM2
SPINT3
TBC1D4
RPUSD4
FAM118B
EIF2S1
ATP6V1D
MCCC1
KRT8
LEO1
EFCAB14
FBXO32
C8orf74
KRT18
JADE2
TFIP11
VIRMA
ATG101
PEPD
TXN
FBXW2
TP53I3
SSBP1
LRRC47
TACC1
RCE1
NBEAL2
TPD52L2
ABHD16B
CCDC12
NYX
TTPAL
NGB
ERCC6L2
TXNL4B
DHX38
CEP63
ANAPC13
RFFL
RPEL1
MRPL58
FAF2
LRFN4
ELF3
C2CD5
C12orf73
RAD52
PERM1
PLA2G4E
KYNU
KLF3
NFKBIZ
TMPRSS4
CCDC77
RPLP2
PIDD1
KDM5A
CXXC4
MBNL1
TIMM22
CORO1C
PRSS22
MED6
MUC17
ADPGK
MRPS21
OR2T1
SAMD4B
KMT2E
TNPO3
ZCCHC4
TTC32
KLK6
TBC1D17
AKT1S1
HAX1
RPS16
FGD3
ZCCHC3
COMMD5
TSPAN3
YBX3
MTERF4
ZNF34
ECH1
FOCAD
UPK3BL2
WDR36
SRRD
HPS4
CHN2
SERPINB2
SECISBP2
CENPW
CPVL
SRRM3
FAM133B
SELPLG
PHF3
COPS8
SLC9A8
TMEM68
TGS1
DHX16
PSG5
VPS37A
CNOT7
LAPTM5
DNAJB12
ERGIC2
ZFP64
GPN1
CCDC121
MRPS18A
TMEM212
VWA1
AHCY
MANBAL
ZNF503
ACER2
C1orf105
ZNF205
RPS9
UPK3BL1
PEX26
CIAO3
KIAA0100
MAPK8IP3
CEMIP
MCF2L
RARA
SCAF11
MED20
BYSL
SCARB1
WDR97
MAF1
HTRA2
DQX1
DDX56
DDX19A
ZNF696
SMARCAD1
KCNJ15
COX16
PSMG2
CEP76
ACAD9
TGFBR2
RPSA
ZNF76
SMARCE1
CLASRP
RILPL1
PMPCB
FAM110A
ZNF384
MYNN
ACTRT3
PEMT
LPCAT3
PFDN4
TAF6
CNPY4
XPC
LSM3
NEMF
C2orf49
RPS20
ZNF623
TMCO6
AKR1B10
CELA3B
ZNF576
IRGQ
ZNF524
FIZ1
GSTP1
BORCS7