ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976675 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◣ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
MRPL11
GRB7
MTRNR2L8
ARID3B
TES
MAMDC2
SLC45A4
TMEM199
POLDIP2
MTRNR2L2
MSH3
DHFR
SFSWAP
ERAL1
ASB2
MTRNR2L1
STARD3
CD300LF
IL1R1
RBBP8NL
C8orf33
UBE3B
KCTD10
CRBN
TOMM22
RAPGEF3
NAGPA
ABCC10
TXNRD1
VIRMA
STAT6
TSR3
GNPTG
APOBEC3B
RBM48
PEX1
GRHL2
SALL4
GSR
GLTP
C1orf174
BHLHE40
TRIB1
SLC35B1
PSMD3
ELFN2
IER3
FLOT1
MMP13
SQSTM1
PSMB7
IDH3B
MIEN1
POLR3F
DZANK1
ZBTB7C
MOCS3
DPM1
MRPL45
RGPD2
RGPD1
LAMP1
CYP2A13
PHAX
SUPT6H
SDF2
ATP5MF-PTCD1
ATP5MF
SENP1
PFKM
YAP1
FLOT2
EIF5A2
SPNS1
EIF2D
ANGPTL4
CD55
SPATA25
NEURL2
CTSA
SOCS2
IRF2BPL
MTRNR2L9
POLR2J3
RARB
SPINK1
DNAJC11
THAP7
ESRP2
UNC13D
KAT8
GATB
TET3
SAP30BP
RECQL5
TMEM207
TRMT1
NACC1
RTF2
TMC7
PECAM1
PLAGL1
SEMA3B
PSMD1
MTBP
MRPL13
METTL25
CCDC59
GPRC5A
TFPT
PRPF31
FAM98B
TRAF4
UPP1
HES1
EPYC
SUMF1
CDKAL1
SERPIND1
MRTO4
EMC1
VAC14
LZTR1
ZNF335
SUPV3L1
ZZZ3
RARG
ZMYND8
SIGLEC15
SKIL
POLR2J
CLPTM1
CENPBD1
HAGH
FAHD1
SLPI
CARD16
LANCL2
MLX
COASY
ZBTB45
SLC25A45
FRMD8
AAAS
SYT12
ZNF383
ATG14
PLD1
MARVELD1
ISY1-RAB43
ISY1
SLIRP
ALKBH1
EPS8
UBE2I
RPTOR
ABT1
HEXA
FAIM
LTO1
ERICH4
DMAC2
SRI
SMG7
KLF9
SUPT7L
SLC4A1AP
PGAP3
ERBB2
DDX41
REEP4
TRA2B
TRIM48
NGDN
ACP3
RBBP5
SART3
ISCU
GADD45A
SEPTIN9
TOX2
GET3
TMEM205
RAB3D
CCDC159
NAPB
NUP214
BCL3
ID1
TRMO
C16orf91
CHRM3
LAMA3
ELF3
ZFYVE26
RAD51B
TXN2
PMEPA1
SPAG16
RHOD
UVRAG
ATF3
SLC25A53
BIRC2
TGFA
GOLM2
AXL
ERCC1
NDUFA2
IK
SAMD10
PRPF6
TMEM41A
STARD4
KRR1
SLC25A51
SLX4IP
MKKS
LOC100509620
ELP5
CTDNEP1
TRMT12
RAD51AP1
C12orf4
ZNF408
ARHGAP1
FEM1A
STX6
SGMS2
RPS16
SMN2
SMN1
RRP15
LSG1
CCND3
TAF8
UPK3B
EDARADD
LOC102723996
ICOSLG
EXOC3L1
E2F4
KLF10
ANKMY1
BCAS1
RNPEPL1
GPC1
TRIQK
LIMA1
MEST
LRRC23
NCAPH2
LMF2
RAB40C
RPS26
PDAP1
BUD31
ZCCHC4
ITGA2
DGAT2
DHRS13
RAE1
HSPB1
KMT5B
PLEKHH2
MTA3
KCNG3
RCOR3
GTSF1L
TOP3A
SMCR8
ATAD2
STX1A
BANP
LRRC46
ZSCAN25
ZBTB7B
VPS50
HEPACAM2
U2SURP
GFM1
CACTIN
SERP1
EIF2A
ANXA2
LGALS8
ZNF576
IRGQ
CSF3R
UBALD2
SUPT4H1
MRPS7
GGA3
TACC1
TSN
MAIP1
MRPL1
NFKBIZ
MRPS15
SPRED2
TPRN
TMEM203
NDOR1
MTUS1
GCN1
RDH5
ITGA7
BLOC1S1
UBE2L3
FAM83A
FAM133B
MBD6
DDIT3
STMN3
RTEL1
SEMA5B
TRABD
SMIM6
RGS3
WASHC5
NSMCE2
TAS1R1
NOL9
ZDHHC6
VTI1A
EPHB3
PHB2
UQCC1
POLR2J2
ZSCAN22
NCBP2AS2
NCBP2
AMN1
NVL
IKBKB
TSFM
LRRC47
MAPKAPK5
IGF2BP3
STX16
PLA2G2A
CAPN14
HABP2
RASSF6
BIRC3
TIMM23
PLEC
ATF6
KCTD5
IRF2BP2
NUDT5
CDC123
ANTKMT
NDUFA9
AKAP3
TCAP
PNMT
SELPLG
KLK6
C5orf51
SSNA1
ANAPC2
RRNAD1
ISG20L2
LCN2
CCNT1
EIF3F
STON2
FOS
TIGD5
EEF1D
HUS1
HSPBP1
BRSK1
KYNU
TIMM23B
PARG
NUP155
KMT2E
SMG8
INTS1
PRSS22
REXO1
TMEM248
ZFHX3
UPK3BL1
VCAM1
RAB3IP
MAGOH
GRWD1
ZP3
MYNN
ACTRT3
CTNNA1
PAXBP1
RPS14
GSDMD
LIPK
DNAJC30
BUD23
ORAI3
PPARD
LRCH4
FBXO24
DPH7
KRT80
TTC32
TIMM50
KMT2A
ARL14EPL
LRRC29
GABRR1
PKP2
IP6K3
LRP6
TCF7
CCDC88B
ZNF2
SEC13
DDX46
DNAJB12
MINK1
TPST2
PLEKHA7
SPINT2
HNMT
ALKBH3
AQP5
ECH1
BAHCC1
NR2F1
RPEL1
TRMT2A
RANBP1
DOK7
DNAH5
CCDC124
SLC39A4
CPSF1
GJB5
GJB4
TBRG4
ECHDC1
PUS10
PEX13
PDCD6IP
GTF3C5
MRPL53
LY6D
FBXO32
ING4
DPP3
BRPF1
PMPCB
EFCAB14
CCDC97
TEFM
EFR3A
CCSER1
SPTLC1
YJU2
MAP3K7
ZGPAT
ARFRP1
BCAR1
DUSP2
NAPRT
MROH6
FANCD2
ZNF497
PEPD
POMZP3
GRK7
LSM14B
CASC3
COPS7B
NUS1
SLC31A1
FKBP15
TJP2
UBQLN1
RPS9
BCL2L13
SNRPC
ATP6V1E1
HAX1
LIN52
ALDH6A1
CDC42EP4
NAALADL2
ABCC3
PSME3
DHRS3
KPTN
TRRAP
CLCN7
LFNG
NOTCH2NLC
VPS52
RPS18
NOTCH3
PRR3
GNL1
NOTCH2NLB
NOTCH2NLA
FAM184A
RALGDS
C19orf33
ARID2
PTPRR
ZNF17
CBLC
RHOV
GTF2H4
MEAK7
MRPL27
EME1
NDRG1
SPRR2F
CDK12
MAN2C1
PFN1
ENO3
COA8
BAG5
KAT5
TIPARP
SPHK2
RPL18
FAM83E
TTC31
CCDC142
SOD2
MIDN
WTAP
USP30
MCCC1
RPL7L1
MCM7
AP4M1
TBC1D23
OAZ3
CDC23
SERPINE1
CIDEA
MTIF2
WDR97
MAF1
TMA16
COQ5
KRT13
GOSR2
TAGLN2
C12orf73
SH2D4A
DYRK1A
VWA7
TMEM18
PSMG2
CEP76
MAP3K7CL
LY6E
WDR72
CCT8
BBS10
AURKAIP1
TRIP4
PPWD1
CENPK
METTL2A
GFM2
TXNL4B
DHX38
GINS1
RABL2A
JMJD7-PLA2G4B
JMJD7
NOL8
CENPP
SREK1IP1
CWC27
SYT1
OR2W3
STAM2
SNRNP200
SEMA6A
SNAI2
ENTPD7
TRIM16L
LRFN4
FAM162A
CCDC58
PSMD12
DDX56
ATP6V1G1
METTL2B
XAB2
PCP2
GTF2IRD2
TRIM55
TMEM123
ZMAT2
PSMB2
DUX4
RARA
THUMPD2
ERP27
PSCA
POU5F1
RFC4
GPR39
METTL17
DDX23
LARP1
MED20
BYSL
MRPS35
FBXL18
ZNF165
CELA3B
PSG1
MED1
SPDYE14
SPDYE10P
CASTOR2
FSCN1
SLC33A1
PLXNB2
RNF223
HSPA9
KMT2D
DENND2B
AKIP1
AMDHD2
VPS11
BRIX1
RPL37
PIGO
SENP2
VARS1
DDB2
NME1
NFKBIA
C8orf58
CCAR2
TLE3
PIM1
TOMM40
RAG2
IFTAP
MACC1
SNRPE
MRPS11
MRPL46
COX16
COMMD2
CORO1C
CRKL
FCF1
AREL1
LRMDA
SLC12A4
CD36
MRPL38
PLPP2
TACO1
GOLGA3
CLDN4
RP1L1
PRR15
NAPA
MB
LGALS7B
RAD52
LEKR1
LNX1
TRIM56
PRSS8
CALML5
PIK3C2B
TMEM120A
SNIP1
DNALI1
PSG5
TOMM70
LNP1
SKIDA1
EIF2S1
ATP6V1D
ALDOA
MAP2K3
ETV4
SLC2A4RG
LIME1
ANAPC5
ANP32A
CTDSP2
SCAF11
GLCCI1
SSBP1
NUDCD3
HR
CDKN1A
MUL1
CLDN24
CLDN22
SERPINB2
FMN1
TH
ATP6V1H
TFAP2C
HEMK1
C3orf18
SUSD1
LEO1
STEAP3
ZKSCAN2
UBE2Q1
NUP107
PDE4DIP
GTF2H3
EIF2B1
IPO11
FOXK1
NDUFAB1
KLHL32
TM9SF4
TRIM29
CEP63
ANAPC13
NYAP1
NDUFAF4
STK19
DXO
SNRPD2
QPCTL
PROCA1
GGCX
URM1
HOXA3
ZNF703
KCNH8
PRPF8
LEP
ARHGAP32
PHF5A
ACO2
TIMM9
KIAA0586
MRPL4
PRKRIP1
RCE1
PDRG1
ITPKC
COQ8B
MPHOSPH10
MCEE
IBA57
ATG9B
ABCB8
ZNF805
TWF1
RBM39
WDR53
FBXO45
ANKK1
REXO4
ADAMTS13
EMC4
ARFGEF2
ADPGK
ADSS1
ORC4
MBD5
POP7
XRCC6
DESI1
PHF3
POLE3
C9orf43
JRK
CCZ1B
DDX49
COPE
CXXC5
ARF3
COIL
FNTB
OGG1
CLCF1
RWDD1
NDUFS3
KBTBD4
UBE2H
TNFAIP1
IFT20
BMP7
NSFL1C
MRPS33
HACD2
TBCK
AIMP1
SLC7A6OS
PRMT7
ALG10
GOSR1
TPCN1
ZSCAN21
LMAN2
ZNF398
TPGS1
RPS27A
CLHC1
RECQL4
LRRC14
H1-7
UBE2C
PES1
CDK5RAP2
SART1
FGD3
FLRT2
ZNF623
MUC20
SLC11A2
NOP16
HIGD2A
PLA2G2E
KAT6A
TPD52L2
ABHD16B
TMPRSS4
KRTAP29-1
TINAGL1
EVPLL
PRKG2
TMEM222
DNAH2
PPP6C
TMEM40
TAF6
CNPY4
PLEKHG6
MRM3
GLOD4
SETD1B
DIDO1
PARL
CEP120
GID8
RIPK1
NUP54
NAMPT
PTPN2
ANKRD36C
KIAA0100
TUBA1C
CSTF1
AURKA
KMT5C
ZNF561
DNTTIP2
C12orf43
SENP5
RNF139
HES4
GUCA2A
MAPKAPK3
CISH
UNC50
COA5
CTTN
RASEF
MRPS18A
C15orf62
MYORG
C9orf24
MRPL3
NMNAT1
LZIC
ANKRD36
PA2G4
TMED10
BNIP1
ZNF3
NR1H2
LYRM4
FARS2
C16orf74
ZFPM1
TSEN34
MBOAT7
LMNA
PRR12
KCNN4
TUBGCP6
HSD17B3
STYXL1
MDH2
C6orf89
ATP6V0D1
AGRP
RPS21
TBCB
POLR2I
OVOL3
GLIS2
NDUFB5
MRPL47
RFFL
PSD
FBXL15
COMMD10
FAM222B
TCERG1
BCL6
PDE12
EXOSC3
ZNF302
MRPS26
GNRH2
IQCG
LZTS2
RPL35A
ASB6
SRRD
HPS4
TMEM95
KCTD11
PSG8
ZNF629
TMEM234
EIF3I
ARID5A
NEK6
FADD
ERBB3
ESRP1
METTL1
EEF1AKMT3
CYP27B1
LENG8
ZNF256
HIF3A
PADI4
FAM149B1
ECD
TTI1
RPRD1B
PROSER1
NHLRC3
WASHC2A
C6orf132
ARL17B
ARL17A
SLC34A3
RNF224
CYSRT1
RHOT2
ZNF668
VGLL4
ZRANB2
ZNF646
SLCO1A2
TBCC
BICRAL
ABHD11
CDC6
BBS1
RNF39
MLIP
STRA6
DENND2D
BCL9L
RPS29
SNRPD3
GUCD1
LRR1
RASA3
ARNTL
SUGCT
MPLKIP
OPA1
SCARB1
EBPL
LAPTM5
ZNF524
FIZ1
COMMD5
ZFP62
TRMT61A
KLHDC7A
FOXN1
ZKSCAN4
NR2F6
TSPYL4
DSE
RNF168