ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930121 | Acute myeloid leukemia
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◣ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX20532176: hESC H1

◢ SRX20532177: hESC H1

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

HEXA
WASHC2C
WASHC2A
AP5Z1
LAMP1
COMMD9
ZNF718
ZNF595
DMWD
GET4
SPDYE13
CYTH3
FIGNL2
RAD9A
STX1A
KAT5
DUX4
MMP9
UBE2Q1
EXT1
ATP6V0D1
AGRP
DGKZ
LMO2
CYB561
KLF2
PRAM1
PMF1-BGLAP
PMF1
RNF149
MTHFR
CLCN6
SPNS1
MCOLN1
HELZ2
BPI
ARHGAP31
CD82
GPR132
BAX
PHACTR3
SUN1
CLCN7
LUZP1
AOAH
TMEM104
NAT9
NFX1
CD300A
STAB1
CCL4L2
LMBR1
LTB
LST1
RPS6KA1
ARID3B
IKZF3
MYEOV
MTRNR2L1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MAMDC2
MRPL11
PHF23
GRB7
ALDH18A1
PDXK
HNRNPA2B1
CBX3
SLC39A10
WDTC1
SLC45A4
EPC2
DDX17
EIF4G2
STRBP
NUDT3
TMEM199
POLDIP2
SLC25A25
NAIF1
GABARAP
SEPTIN7
FRG2C
TES
WASF2
MRPL45
ERAL1
ERCC1
SPATA25
NEURL2
CTSA
MARCHF9
CDK4
SFSWAP
GPR137
BAD
POLR2J3
HAGH
FAHD1
SERPIND1
GSK3B
NAGPA
UVRAG
CD300LF
RSF1
AAMDC
SPATC1L
MUC3A
MSMO1
CRBN
RBBP8NL
GRHL2
UBE3B
KCTD10
DAGLA
RGPD2
RGPD1
RPGRIP1L
FTO
TRMO
RBM48
PEX1
MTRNR2L9
PSMD3
MTBP
MRPL13
SUPT7L
SLC4A1AP
MDM2
RALGDS
TXNRD1
CCDC200
FAM72D
FAM72C
SUMF1
SKIL
IL1R1
ZBTB7B
RAE1
SLC35B1
SYNGAP1
CUTA
STARD3
RPUSD4
FAM118B
BCL3
HES1
C8orf33
TOMM22
SMARCD2
EFNA3
USP49
C1orf174
THAP7
ZZZ3
DDX42
CCDC47
SRSF1
TBL1X
ISY1-RAB43
ISY1
ILF3
ABCC10
TRIB1
ASB2
TRIM48
POLR3F
DZANK1
SOCS2
RBBP5
SERPINI1
PDCD10
ANGPTL4
STX16
RAPGEF3
GBA
STAT6
TSR3
GNPTG
LZTR1
ATP6V1G1
VPS50
HEPACAM2
MAN1B1
FRG2
MACC1
UNC13D
RARB
ATF3
BHLHE40
SQSTM1
CD55
POLR2J2
APOBEC3B
GADD45A
VPS33A
PGAP3
ERBB2
ESRP2
RHOBTB2
MIEN1
YJU2
ZNF335
TMC7
SEPTIN9
POLR2J
SLC35A5
ATG3
OSGEP
APEX1
IRF2BP2
TRMT2A
RANBP1
PTPRF
METTL25
CCDC59
PDE4DIP
IDH3B
PSMB7
SUPT6H
SDF2
PGLYRP4
CARD16
FANCA
CLPTM1
AURKAIP1
SUPV3L1
TET3
GOLM2
TFPT
PRPF31
SPINK1
SNRPE
SMN2
SMN1
GSR
RDH5
ITGA7
BLOC1S1
ERICH4
DMAC2
TRA2B
VIRMA
CYP2A13
RGS3
RPS26
C5orf51
LAMA3
PDGFB
SALL4
ELFN2
WASHC5
NSMCE2
TBRG4
ZBTB7C
ZNF408
LGALS8
ARHGAP1
MOCS3
DPM1
TRAF4
UPP1
XPO7
WDR74
SLC25A53
MRTO4
EMC1
NUP214
PDAP1
BUD31
SRI
NME1
YAP1
CLN3
APOBR
TSFM
GET3
HPS5
GTF2H1
TOP3A
SMCR8
PAXBP1
SENP1
PFKM
SLC25A45
FRMD8
CDKAL1
INO80C
ANXA2
GLTP
CEP162
TMEM205
RAB3D
IRF2BPL
CCDC159
FAM72A
CASC3
KMT2E
ATP5MF-PTCD1
ATP5MF
AMDHD2
SAP30BP
RECQL5
TRMT1
NACC1
SLIRP
ALKBH1
MMP13
MFSD1
FLOT2
PPP6R1
DOK7
ZSCAN22
U2SURP
ENTPD4
RARG
ZNF165
DVL2
TXN2
ZNF383
AXL
PRICKLE1
SPAG16
CDK12
ZSCAN25
SUSD4
TAS1R1
NOL9
SLC4A2
CDK5
C16orf91
IER3
FLOT1
ZDHHC6
VTI1A
BIRC2
GATB
MYCL
ZBTB45
WWOX
DDX41
ATAD2
TMEM40
NDUFA2
IK
EIF2D
SMG7
GFM1
CCDC88B
CELA3B
PMS1
ORMDL1
KRR1
CCNT1
ZMYND8
ST7
JMJD7-PLA2G4B
JMJD7
RTF2
NDUFA4
VAC14
SLC25A11
RNF167
LIMA1
PCIF1
MRPS15
KCNMA1
EPHB3
SHLD2
GLUD1
PLAGL1
HUS1
UBE2B
CDKL3
KAT8
TBC1D30
PIP4P1
FAM83A
PHAX
KLF10
DNAJC11
RAD51AP1
ECH1
C12orf4
NAPB
SEPTIN5
INTS10
GP1BB
SPRED2
E2F6
ZNF576
IRGQ
TM2D2
ADAM9
ZNF668
WBP2
SSBP1
DIP2A
LRRC47
ARHGAP32
STAU2
MEMO1
UBE3C
NUP107
ARID5B
CCDC97
MOB1B
COL23A1
SUPT4H1
KLF9
MEF2C
UBE2I
RRP15
NGB
SUMO3
NGDN
KANSL3
FER1L5
PTBP1
PSME3
TRIP4
TJP2
TNC
HNRNPH2
GLA
ITGB3BP
EFCAB7
FSCN1
BANP
SEMA3B
UBAP2L
C1orf43
C19orf33
CALML5
THOP1
SGTA
PASD1
USP30
PPWD1
CENPK
WDR62
THAP8
MRPS7
GGA3
THEMIS2
ATG9B
ABCB8
UBQLN1
TPP1
ETV4
BIRC3
CMIP
B4GALT2
CYP27B1
SH3GL1
CHAF1A
SLC33A1
THRAP3
GPATCH3
LANCL2
ARID2
BAIAP2
CLSTN1
ATG14
EIF5A2
RPTOR
DHX35
ANKS6
ELP3
EPS8
MAGEB10
HM13
ZNF2
DAZAP1
BMI1
RFX1
BSG
NDUFS7
MIER1
SSH1
BMS1
XRCC5
ANKMY1
SEC13
GNS
PSMD1
SLK
LRRC29
CACTIN
ADGRB3
PLD1
DENR
ACVR1B
LPCAT3
DHRS13
VWA7
FGGY
STMN3
RTEL1
MRPS11
MRPL46
MAP3K7
TMEM116
ERP29
ADGRL1
ALG6
TRIM16L
IGLL5
SKIDA1
VPS11
SLC6A9
TNNC2
SNX21
MEOX1
SUMO2
NUDCD3
ECHDC1
NOP16
HIGD2A
AAAS
SCAMP5
NFE2
LSG1
OAZ3
TIMM23
ATP6V0B
BCAS1
TSN
KDM7A
DICER1
ZNF497
ADAM23
UBE2L3
TIPARP
DUSP6
DDX23
HOXA3
OTUD7A
FAIM
TNPO3
VGLL4
RHOD
ZNF524
KDM3A
FIZ1
GTF2H4
TMCC3
NCBP2AS2
NCBP2
LMAN2
RXRA
STYXL1
STRA6
SH2B1
PLEC
NOTCH2NLC
HOXC13
NOL8
CENPP
TRUB2
GPRC5A
COQ4
RMND1
ARMT1
ZCCHC4
EIF3F
PRKRIP1
PSMD5
DGAT2
REEP4
FAM72B
TGIF1
SMARCA4
SEC22B
METTL1
EEF1AKMT3
KMT5C
EIF1AD
DPP3
BANF1
PMEPA1
SF3A3
RNPEPL1
SPHK2
RPL18
PTPRR
FAM83E
DDX46
STX6
ZNF507
NDUFAB1
KRT80
DNAJC30
BUD23
PRMT3
RABGAP1L
CORO7
PYCR2
QRICH1
STON2
PLEKHH2
FLYWCH1
DHRS3
TEX46
SERP1
KDM1A
EIF2A
SYNCRIP
BLOC1S4
TCERG1
LTO1
BAHCC1
NPEPPS
ATP6V1C1
TIMM22
NAPA
TSC1
GFI1B
HDAC6
ITGA2
RARA
ATP6V1H
PUS10
PEX13
BAG6
APOM
HSPB1
NEXN
METTL2A
PDCD6IP
SART3
RRAGC
ISCU
TMEM18
SBK1
UPK3B
TPRN
TMEM203
NDOR1
EIF2S1
ATP6V1D
LARP1
COPS7B
SMG8
NFKBIA
SCYL3
PRAME
AP2A2
ZGPAT
PPP5D1
NSD1
CALM3
ARFRP1
PLXNB2
PHF19
KMT5B
KDM4C
TTC32
RBM39
TMEM59
TCEANC2
TFAP2C
MAIP1
AGTPBP1
MAN2C1
INTS1
NOXO1
GFER
PARD6B
CHRM3
MYL12A
TFDP1
HOOK2
ZNF830
CCT6B
CHMP7
BCAR1
MDH2
DUSP2
MTUS1
COX16
FEM1A
PECAM1
GRHL1
ZNF33B
NDUFB5
MRPL47
PRKCA
COLEC12
TMCC2
LUC7L2
MRPL1
FOS
CAPRIN2
SFXN1
KLHL12
EIF3H
LRFN4
LYPLA1
BRPF1
PSMG2
CEP76
MAN2A2
SAMD10
PRPF6
KDSR
DRC7
PEAK1
HMG20A
NFU1
TINAGL1
LFNG
INKA2
EPB41
RTN4
NUF2
CENPBD1
C8orf58
NR5A2
METTL2B
NSF
MEAK7
MARVELD1
BNIP1
RNASEK
LRRC23
C17orf49
SAP30
NVL
RNF223
BACH2
DNAH5
TACC1
WNK1
WDR97
MAF1
HSPA9
CBX7
RPS11
FBXL3
AFF4
SP2
PES1
MKLN1
PLA2G2A
MINDY2
DNAJB12
RPS14
JMJD1C
CHD7
CSTF1
AURKA
WWP1
LRRC46
NOTCH2NLB
NOTCH2NLA
SMYD1
CSF3R
USP28
FASN
UBE2E2
SF3B3
COG4
AIFM1
SLC24A1
FZR1
CACNA2D2
SPTAN1
HSPBP1
BRSK1
RAB3IP
S100A2
FAM133B
HERC5
VPS52
RPS18
GUCA2A
GRIN2D
SLC2A4RG
PLEKHF2
LIME1
C3orf70
FMC1-LUC7L2
FMC1
RCHY1
NOTCH3
PLA2G2E
GABRR1
KLHL32
HR
ABCC3
GTF2H3
EIF2B1
FRMPD1
SLC1A7
TMEM239
ABT1
CCDC174
WBP1L
TMBIM1
PPP2R5A
GTF3C5
ARID1A
SYT7
SUGCT
MPLKIP
ACTN4
WDR53
FBXO45
TTC31
CCDC142
BRIX1
RBPJ
DTNB
XAB2
PHB2
PCP2
PHF21A
NR2F1
GFM2
FAM222B
CFAP206
KMT2D
ANKK1
SSNA1
ANAPC2
URM1
SYNPO
CUTC
COX15
GSN
SNX16
PRR3
GNL1
C17orf58
ORAI3
MB
UTP3
RPL5
PRKCE
ZNF609
SCAF11
MSS51
MLX
COASY
ZNF17
ZNF3
KDR
DNPEP
RWDD1
FAM162A
COMMD2
CCDC58
ATG101
FCHSD2
PTK2
NFASC
PATZ1
TRIM67
C1QTNF1
RPL23A
RAB34
MAP3K1
MARCHF2
CCAR2
IKZF2
AUTS2
PHIP
FAM98B
COMMD4
TLE3
TBL3
GCN1
ZC3HC1
TIMM50
MINK1
ELF3
CPT1A
IFT140
FZD1
CRAMP1
GPC1
PTP4A3
MGAT5
MAZ
TMEM242
NDUFA9
AKAP3
IGF1R
REXO4
OXNAD1
DPH3
ADAMTS13
KAT6A
PTPN12
ATXN7L2
GOLGA3
TRIL
RBKS
BABAM2
MED23
TRIQK
RCE1
MRPL21
IGHMBP2
EIF4A2
LOC100509620
CORO1C
SRSF6
ZMPSTE24
LAPTM4B
ZNF77
SEMA5B
EXOSC5
BCKDHA
LASP1
LAMTOR1
EPYC
ZNF217
CNPY2
APP
UBXN2A
CDC6
PXT1
KCTD20
MIDEAS
GOSR2
TAOK1
CHD1
NDUFB3
FAM126B
CCNI
PSMA1
MAPKAPK5
PNO1
USF2
CSTF2
TPST2
TARS2
TMEM167B
PRSS22
GTF2IRD2
UPF1
CRKL
ATXN7L3
DIABLO
ZBTB18
SGMS2
ERGIC2
CHIC2
TAGLN2
TM7SF3
RPS9
ELAPOR2
COMT
ANKZF1
MED1
EIF4H
COLEC11
OPA1
TMEM41A
PHC2
TANGO2
PMPCB
OAZ1
ADCY9
ZNF292
SLC4A1
PKP2
PTPRG
LYPLAL1
APBB2
ABCB10
TEFM
PRKAB1
SLC8A3
NFIB
EDARADD
VIM
PPARGC1A
OBSL1
INHA
BCL7B
SPRTN
EXOC8
REXO1
LCOR
BCL6
TMEM91
ALKBH3
ID1
BHLHB9
SLX4IP
PUM2
MTIF2
MKKS
SGO1