ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059714 | VCaP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◣ SRX059714: VCaP

◢ HDAC3: STRING

PMF1-BGLAP
PMF1
PRICKLE1
RAE1
PASD1
MAGEB10
NBPF6
APP
ARID3B
SCGB3A1
MAMDC2
KDR
SLC45A4
ZBTB7B
PMM1
DNPEP
ETV4
TM2D2
ADAM9
TENT2
CALML5
PIK3AP1
NGB
PEX10
LECT2
PROP1
NBPF4
LGALS8
NUDT3
APBB2
SMIM34A
FRMPD1
LAMA3
GRM3
TMEM216
GALNT18
CDK14
ACMSD
RUVBL1
EEFSEC
SBSPON
CXCL8
NPR2
TMEM40
JPH4
C6orf58
PPARGC1A
ANGPT1
TIPARP
HDGF
STEAP4
HIGD1C
SMYD1
SCML1
SGK3
TRIM52
MRGPRD
LDB3
TSGA10
IFRD1
NWD1
DUX4
IRX4
BCL2L13
HIF3A
BEST3
UNC45B
ARSG
NUDT10
TRPT1
NUDT22
DNAJC4
SCUBE3
SCNN1D
PCDH7
ERN1
PPP1R15B
TBL1X
UGT2B10
JPH3
DAAM1
SUPT7L
SLC4A1AP
ATXN2L
SASH1
MAX
ZNF610
MUC3A
RAB37
KRT4
RFPL3
CDCA7L
TNK2
HAPLN2
GLYATL1
ATOH8
DDX19B
AARS1
ANP32E
MAGEA10-MAGEA5
MAGEA10
STC1
SKIDA1
WDR74
MTCL1
PDE9A
EXPH5
LGALS7B
ZBTB18
MX1
SCIMP
RRBP1
NFIC
ERCC1
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
DGKK
LEFTY1
ADRA2C
MKLN1
WDPCP
EYA3
SULT1C3
POLR2J3
UNC13A
PRRT1
PPT2
ATP6V1G1
TMEM204
DHX36
DIDO1
TUBA3D
TGFB3
IFT43
NOVA2
DUSP6
ISX
LOC100509620
KRT3
NPTX2
TMEM100
GABRA2
SLC16A8
TLK1
TIMP2
MSX1
KLK3
PFKFB1
IRGM
DPP9
TEPSIN
NDUFAF8
BDNF
FAM234B
PIGZ
MBOAT2
ARHGAP22
CLDN8
ARHGEF38
IGFBP1
TMCC2
MUSK
KCNQ3
MAT2A
DUS1L
SEC13
MMP17
VSTM5
TRIM48
TRMT12
SLC29A2
DAB1
PDGFA
MTRNR2L1
ANKRD40CL
HES6
UGT2B28
RPH3AL
EIF4EBP1
PALLD
HDGFL2
ZNF771
CYP3A43
ANK3
IFNLR1
KCTD7
DLX1
CLIC6
TUBA3E
MKS1
IL20RA
FAM222B
TFCP2L1
CA8
TAOK3
SLC30A4
PFKFB3
ADAMTS8
SEPTIN9
VAT1
RND2
MTRNR2L2
MSH3
DHFR
TMEM237
BIRC5
ZNF559-ZNF177
ZNF559
SH2D6
MAPKAPK3
STK32A
FBXL20
FNDC10
NEBL
PNMA6A
EFCAB12
OR13G1
SENP1
PFKM
LOC114841035
FKBP2
VEGFB
MTMR9
CHCHD5
ZNF331
TRIM49D2
TRIM49D1
LBHD2
CDC7
LSM11
SYK
UGT2B11
SLAIN1
STAU2
ALDH3B2
CDRT4
SAXO2
EFL1
SLC2A5
PHGR1
MACROD1
LAPTM4B
ITPRID1
TPT1
ZNF516
TSPAN3
DECR1
SIN3B
PYCR2
EDN3
FKBPL
ATF6B
SMIM13
HIVEP1
PFKL
PHF19
KSR1
TTC7A
MCFD2
ATXN7L2
ZCCHC14
CMTR2
DMD
MPP1
TMSB15A
GPR173
PRDM1
CDYL
PEBP1
TPD52
CBY3
TRAF3IP2
GAPDHS
NFIB
SHF
PHACTR4
WIZ
PRRC2B
AP1S3
NUDT9
CREB3L1
ANPEP
WRNIP1
NME4
DECR2
KIAA1522
WASHC3
TRIQK
ZNF341
C3orf20
MTRNR2L8
ESRP2
TASOR
NIBAN2
C1orf116
NPBWR2
TUT1
CPLX1
SRRM4
PRR15L
C4orf51
TTLL12
PRKAG2
TRABD
TLE1
CX3CL1
CDKN2AIP
CCDC200
C3orf14
CCN5
NSMAF
DBP
CD99L2
SCAMP2
RGL3
RNF115
POLR3C
USP30
USP44
HUS1
LMOD3
CD93
DLG2
FRG2
SHLD2
GLUD1
EFNA1
SLC50A1
BRD2
UTRN
NFIX
MOCS1
TMEM266
GSTP1
MNS1
RAB4A
SUSD4
PLIN1
MYH10
HOXC6
HOXC5
SMYD3
HSPA4
UNC80
MOGAT2
INPP5K
RGPD2
RGPD1
ETV5
PAX6
AUTS2
CDKN1A
CYRIB
ACSBG2
NUP160
MAPK12
THRSP
SOCS2
TMPRSS11F
ZDHHC9
SNAI1
REG1A
PRELID2
INIP
EDARADD
TBC1D14
VPS37C
MTNR1A
OTUD7B
AGPS
ZNF287
PRMT8
RNF186
DSCAML1
PIH1D2
NKAPD1
NR2F2
ECE1
RAB36
GSPT1
LRRC30
HSPA12A
ENO4
SPIDR
ABHD2
KCNS3
BBS1
FAM107A
HERC3
FZD9
TRIM68
GPR153
BCL6
ZNF547
TRAPPC2B
QKI
G3BP2
DCLK1
B4GALNT3
RERE
SPATA6L
PLPP6
THAP11
NUTF2
CENPT
HSD17B6
ADGRG7
PDE4D
UNCX
COPRS
POLR2J2
RUNDC1
PTGES3L-AARSD1
PTGES3L
PER1
KCNH2
RHOH
RASAL2
ATL3
NMI
PSCA
SRP9
LDLRAD4
XKR9
LACTB2
REP15
RPL22L1
CDK3
TRMT61A
CKB
STX16
FZD1
RTN1
CYTH1
THAP4
GPX5
BLNK
ANXA1
GRHL2
ANKRD28
PXYLP1
RASSF8
KCNIP1
ITGB3BP
EFCAB7
ZG16B
FAM214A
BCAR3
ARHGEF7
LINGO1
GLI2
CAMK1
KLF15
CST2
CFAP74
NR1I2
NAPA
TAS2R42
PAH
SRSF10
OR1L1
CD177
TMEM11
FAM174B
NME1
PMVK
NFKBIL1
DDX39B
ATP6V1G2
PF4
SBF2
CDHR3
DHRS13
ZNF614
RAB11FIP1
C9orf152
CAMKK2
TMEM87A
GANC
TMEM217
TBC1D22B
FOXQ1
SPTBN1
MSMB
SYVN1
CEBPD
CCDC86
TXNRD1
COL23A1
GREB1
SMOX
FAAH
HERC5
ZNF200
ST6GALNAC4
FAM110B
TMEM210
LRRC26
MMAA
SLC2A9
SLC13A1
TBC1D9B
TAFA4
RGS3
CPT1A
MRPL48
FAM107B
SIRT4
HDAC4
SCUBE2
BRD3
NBR1
AK4
MAP3K6
INPP5A
CCL14
NFKBIA
SUGCT
MPLKIP
TNFSF15
MAD2L1BP
GTPBP2
PANK1
ST3GAL6
KRTAP9-6
DNAH5
MRPL21
IGHMBP2
FBXL5
H4C3
H1-6
EVL
GMNN
KRT28
EPHB3
RUNX1T1
MTHFS
EPB41L4B
CHMP4C
HOXA3
RAD52
ARHGAP40
CORO2A
SLC6A11
ITPR3
GSG1
LOC105370980
VPS13B
EMP1
SREBF1
LFNG
SELENOS
LRRC25
MMP15
LPCAT3
TMEM68
TGS1
MED30
C11orf24
OTOL1
B3GNT6
TRIM33
DNASE2B
CGN
RIN2
TBPL1
GOLPH3
KRT35
EI24
VPS26B
NCAPD3
CCDC68
ADAMTS3
SKIL
ATL1
MAP4K5
NUDT16
MPHOSPH10
MCEE
UBB
PGBD3
SLN
ZCRB1
PPHLN1
SMAD4
RP1
TNRC6B
RAB11A
SLCO1A2
DPY19L4
SYNM
PACSIN1
B3GAT1
ZNF579
PRXL2A
GPR37
HEXIM1
TMTC2
TCHHL1
ANO6
PDZK1
MLLT11
CDC42SE1
MBNL1
CARTPT
RRP1
SEMA6D
CEMIP2
RPS27
RAB13
CEP162
IKZF3
MYEOV
HEXA
MRPL11
PHF23
GRB7
LAMP1
ALDH18A1
PDXK
HNRNPA2B1
CBX3
SLC39A10
GET4
WDTC1
AP5Z1
EPC2
DDX17
EIF4G2
STRBP
TMEM199
POLDIP2
SLC25A25
WASHC2A
NAIF1
GABARAP
SEPTIN7
TES
KAT5
WASF2
MRPL45
ERAL1
WASHC2C
SPATA25
NEURL2
CTSA
FRG2C
UBE2Q1
SFSWAP
MARCHF9
GPR137
CDK4
BAD
HAGH
FAHD1
SERPIND1
GSK3B
NAGPA
SPNS1
UVRAG
ATP6V0D1
AGRP
CD300LF
RSF1
AAMDC
MSMO1
CRBN
RBBP8NL
UBE3B
KCTD10
DAGLA
RPGRIP1L
FTO
TRMO
RBM48
PEX1
MTRNR2L9
PSMD3
MTBP
MRPL13
MDM2
RALGDS
FAM72D
FAM72C
SUMF1
IL1R1
SLC35B1
MTHFR
SYNGAP1
CUTA
STARD3
RPUSD4
FAM118B
BCL3
HES1
C8orf33
TOMM22
CLCN7
SMARCD2
EFNA3
USP49
C1orf174
THAP7
ZZZ3
DDX42
CCDC47
SRSF1
ISY1-RAB43
ISY1
ILF3
ABCC10
TRIB1
ASB2
POLR3F
DZANK1
RBBP5
CLCN6
SERPINI1
PDCD10
COMMD9
ANGPTL4
RAPGEF3
GBA
STAT6
TSR3
GNPTG
LZTR1
VPS50
HEPACAM2
MAN1B1
MACC1
UNC13D
ATF3
BHLHE40
SQSTM1
CD55
APOBEC3B
GADD45A
VPS33A
PGAP3
ERBB2
RHOBTB2
RARB
MIEN1
ZNF335
TMC7
POLR2J
SLC35A5
ATG3
OSGEP
APEX1
IRF2BP2
TRMT2A
RANBP1
PTPRF
METTL25
CCDC59
IDH3B
PSMB7
SUPT6H
SDF2
PGLYRP4
CARD16
FANCA
CLPTM1
AURKAIP1
SUPV3L1
TET3
GOLM2
TFPT
PRPF31
SPINK1
SNRPE
SMN2
SMN1
MCOLN1
YJU2
GSR
RDH5
ITGA7
BLOC1S1
ERICH4
DMAC2
TRA2B
VIRMA
RAD9A
RPS26
C5orf51
PDGFB
SALL4
ELFN2
WASHC5
NSMCE2
TBRG4
ZNF408
ARHGAP1
MOCS3
DPM1
TRAF4
UPP1
XPO7
SLC25A53
MRTO4
EMC1
CYP2A13
NUP214
PDAP1
BUD31
SRI
YAP1
CLN3
APOBR
TSFM
GET3
HPS5
GTF2H1
TOP3A
SMCR8
PAXBP1
SLC25A45
FRMD8
CDKAL1
INO80C
ANXA2
GLTP
TMEM205
RAB3D
IRF2BPL
CCDC159
FAM72A
CASC3
KMT2E
ATP5MF-PTCD1
ATP5MF
AMDHD2
SAP30BP
RECQL5
TRMT1
NACC1
SLIRP
ALKBH1
MMP13
MFSD1
FLOT2
PPP6R1
DOK7
ZSCAN22
U2SURP
ENTPD4
RARG
ZNF165
DVL2
TXN2
ZNF383
AXL
SPAG16
CDK12
ZSCAN25
TAS1R1
NOL9
SLC4A2
CDK5
C16orf91
ZBTB7C
IER3
FLOT1
ZDHHC6
VTI1A
BIRC2
GATB
MYCL
ZBTB45
WWOX
DDX41
ATAD2
NDUFA2
IK
EIF2D
SMG7
GFM1
CCDC88B
CELA3B
PMS1
ORMDL1
KRR1
CCNT1
ZMYND8
ST7
JMJD7-PLA2G4B
JMJD7
RTF2
NDUFA4
VAC14
SLC25A11
RNF167
LIMA1
PCIF1
MRPS15
UBE2B
CDKL3
KAT8
PIP4P1
FAM83A
PHAX
KLF10
DNAJC11
RAD51AP1
ECH1
C12orf4
NAPB
SEPTIN5
INTS10
GP1BB
SPRED2
E2F6
ZNF576
IRGQ
ZNF668
WBP2
SSBP1
DIP2A
LRRC47
ARHGAP32
MEMO1
UBE3C
NUP107
ARID5B
CCDC97
MOB1B
STX1A
SUPT4H1
MEF2C
UBE2I
RRP15
SUMO3
NGDN
KANSL3
FER1L5
PTBP1
PSME3
TRIP4
TJP2
TNC
HNRNPH2
GLA
FSCN1
BANP
SEMA3B
KCNMA1
UBAP2L
C1orf43
C19orf33
THOP1
SGTA
PPWD1
CENPK
WDR62
THAP8
MRPS7
GGA3
THEMIS2
ATG9B
ABCB8
UBQLN1
TPP1
BIRC3
CMIP
B4GALT2
SH3GL1
CHAF1A
SLC33A1
THRAP3
GPATCH3
LANCL2
ARID2
BAIAP2
CLSTN1
ATG14
EIF5A2
RPTOR
DHX35
ANKS6
ELP3
EPS8
HM13
ZNF2
SPATC1L
DAZAP1
BSG
NDUFS7
MIER1
SSH1
BMS1
XRCC5
ANKMY1
TBC1D30
GNS