ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976673 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◣ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
MTRNR2L8
MTRNR2L2
MSH3
DHFR
MRPL11
TMEM199
POLDIP2
MAMDC2
GRB7
ARID3B
TES
ERAL1
MTRNR2L1
SLC45A4
MRPL45
MTRNR2L9
RARB
C8orf33
SFSWAP
RBBP8NL
CD300LF
UBE3B
KCTD10
CRBN
RGPD2
RGPD1
BHLHE40
POLR3F
DZANK1
POLR2J3
PSMD3
CLPTM1
C1orf174
VIRMA
ESRP2
GRHL2
MIEN1
PSMB7
LAMP1
SLC35B1
TXNRD1
RBM48
PEX1
PGAP3
ERBB2
TSR3
GNPTG
POLR2J
ASB2
IDH3B
UNC13D
STARD3
APOBEC3B
SERPIND1
MMP13
LZTR1
ZNF383
ATF3
TFPT
PRPF31
RAD51AP1
C12orf4
TJP2
TRA2B
CD55
CYP2A13
POLR2J2
ISY1-RAB43
ISY1
SMN2
SMN1
VAC14
SLIRP
ALKBH1
MTBP
MRPL13
SUPT4H1
HES1
HAGH
FAHD1
RBBP5
C16orf91
ERCC1
UBQLN1
PLEKHH2
TET3
GATB
ERICH4
DMAC2
NDUFA2
IK
NDUFB3
FAM126B
THAP7
RAPGEF3
STAT6
JMJD7-PLA2G4B
JMJD7
SOCS2
SPINK1
MRPS11
MRPL46
HEXA
FLOT2
SKIL
TRMT1
NACC1
PHAX
CLDN9
STX16
RRP15
TOMM22
YAP1
SQSTM1
IRF2BPL
U2SURP
PCNP
ZBTB45
UBE2I
SALL4
ELP3
NAGPA
CARD16
KRT80
SLC25A53
ABCC10
TMC7
LPCAT3
SUPT6H
SDF2
VPS50
HEPACAM2
MRTO4
EMC1
TSFM
SMG7
SUMF1
TRIB1
MUC3A
MOCS3
DPM1
SUPT7L
SLC4A1AP
TBRG4
CDKAL1
ZNF576
IRGQ
SAP30BP
RECQL5
SLC25A45
FRMD8
STON2
LMAN2
RPS26
TRAF4
TRMO
SPATA25
NEURL2
CTSA
CASC3
ATP5MF-PTCD1
ATP5MF
ZMYND8
RGS3
SENP1
PFKM
NAPB
SNRPE
DNAJC11
PUM2
GOLM2
ATG14
METTL2A
ZSCAN25
MFSD3
GPT
EIF3H
FAIM
SERP1
EIF2A
BCL3
DDX46
SUPV3L1
EPHB3
BRIX1
KAT5
MTO1
METTL25
CCDC59
METTL2B
STYXL1
AGTPBP1
MDH2
HEMK1
C3orf18
REEP4
TFAP2C
ELFN2
RTF2
NDUFAB1
C19orf48
RALGDS
SPAG16
IL1R1
TBL1X
GET3
CCDC88B
MTUS1
BNIP1
TTI1
RPRD1B
ZSCAN22
DDX23
PTPRR
UPK3BL1
TTC31
CCDC142
COLEC11
DDX41
CHMP7
ZNF17
BRF2
RAE1
EIF5A2
ZNF524
FIZ1
RARG
TRIP4
SYT12
POLR1H
ZNF3
LGALS8
DOK7
TAS1R1
NOL9
PPWD1
CENPK
GTPBP4
HS3ST6
TOP3A
SMCR8
ECHDC1
TIMM22
DIABLO
CCDC97
RAB3IP
MFSD10
ASB6
ZGPAT
ARFRP1
KLF10
PLA2G2E
ATG101
ZZZ3
IRF2BP2
BAIAP2
PRKRIP1
SRI
ZNF830
CCT6B
ATAD2
MAPKAPK5
HUS1
BIRC3
RCE1
WASHC5
NSMCE2
BCAS1
PDCD6IP
PHF3
VPS33A
NME1
LSG1
HOXA3
GTSF1L
TXN2
ECH1
ZNF2
AXL
C19orf33
PSMD1
GLTP
BMS1
SLX4IP
MKKS
UPK3BL2
GADD45A
LARP1
S100A2
MIEF1
PSME3
USP30
DPP3
FAM133B
DLC1
ZNF165
EIF1AD
BANF1
NFKBIA
SLC2A4RG
LIME1
PTPRU
VPS37A
CNOT7
SH2B1
EIF3F
MED20
BYSL
TUFM
PDAP1
BUD31
TIMM50
TJAP1
TBL3
RNF151
AQP5
TBL1XR1
STX1A
PRR3
GNL1
ZNF408
ARHGAP1
SPHK2
RPL18
FAM83E
LRRC23
GTF3C5
SCARB1
WDR72
WDR18
RBPMS
TRIM48
GCN1
MED6
POMZP3
GPSM3
PBX2
STMN3
RTEL1
ZC3HC1
RBM42
FIS1
DDX11
ATP6V0D1
AGRP
TIPARP
ZRANB2
OR2W3
ZNF579
GFM1
GPATCH3
COX16
EVPLL
MRPS7
GGA3
ATG9B
ABCB8
ATP6V1C1
SSNA1
ANAPC2
GRK7
THBS3
MTX1
TBC1D17
AKT1S1
YJU2
MRPL1
MED23
RAB40C
ZFP64
SEPTIN9
LANCL2
TTC32
PSMG2
CEP76
MARVELD1
COPS7B
RWDD1
CDC6
ZFHX3
KAT8
KRR1
TRIM16L
RXRA
UTP20
BIRC2
PNO1
PPFIBP2
PHF5A
ACO2
CDK5RAP2
NGDN
FSCN1
VPS11
NDUFB5
MRPL47
MEAK7
PLA2G2A
FAM162A
CCDC58
RPS12
SYT1
C7orf65
TMEM95
KCTD11
PSG7
PLEC
ABCC3
FAM184A
RPL26L1
CDK11B
CDK11A
PMPCA
ENTR1
TMEM205
RAB3D
CCDC159
PUS10
PEX13
MLX
COASY
SETD3
CCNK
FCF1
AREL1
YIPF3
POLR1C
FRG2C
TRMT2A
RANBP1
SEC13
KLF9
INTS1
DNAH5
MMP10
UQCRQ
GDF9
RPL23A
RAB34
ERGIC2
PPP1R37
MTHFR
CLCN6
ZDHHC6
VTI1A
GTF2H3
EIF2B1
GRWD1
MUC2
TSR1
SGSM2
NOC2L
KLHL17
PGGT1B
GLCCI1
PHLDB2
TMEM101
DNTTIP2
ITGA2
DGAT2
RASEF
EIF3E
ANXA2
LYPLA1
NDUFA9
AKAP3
ALKBH3
PSG1
ELF3
MUL1
EXOC5
AP5M1
AURKAIP1
RDH5
ITGA7
BLOC1S1
RBM39
NOTCH3
PHB2
RBM19
SEMA4B
MTA2
MAP3K7
CATSPER2
UPP1
CDK12
NUDCD3
RPS14
PRSS22
NUS1
ZNF335
LRRC29
KMT2D
CORO1C
PFDN1
C5orf51
VWA7
LRFN4
LSM5
ZFPL1
TMEM262
CDCA5
NOC4L
DDX51
DUX4
ZBTB7B
CCNT1
DHRS3
SART3
ISCU
KMT5C
LOC100509620
SLC9A1
NDRG1
PTAFR
GSR
TSN
MAIP1
SF3B3
COG4
TARS2
OPA1
CHRM3
SNRPB2
ASH2L
ARHGAP30
PLAGL1
TSC1
GFI1B
WDR53
FBXO45
TCAP
PNMT
KPTN
ANXA3
CERK
URM1
RRNAD1
ISG20L2
HCAR2
PTPN2
MACROD1
OAZ3
DNAJC30
BUD23
FOS
MED4
COG2
RBP2
PLD1
HR
IPO11
FOXA2
TGFBI
FADD
OR2T1
POM121L12
SPNS1
SF3A3
ANKK1
GPC1
TCERG1
PCID2
CUL4A
OR6B2
NDUFA10
MICAL2
MRPL55
PMS2
AIMP2
IER3
FLOT1
PMEPA1
HSPB1
EIF2S1
ATP6V1D
MED1
ACP3
ZBTB7C
DHX35
GUCA2A
MB
CAPN14
TEKT2
ADPRS
SETD1A
CLPB
LIMA1
SEC61B
MYL12B
PARL
RPL7L1
PIK3C2B
TAF6
CNPY4
BTNL8
HSPBP1
BRSK1
MBD6
DDIT3
TNFRSF12A
THOC6
HCFC1R1
CLDN6
SPDYE14
SPDYE10P
TPRKB
MRPS26
GNRH2
UBXN1
MRPS15
AAAS
RARA
TAGLN2
TRIM29
SLC26A8
MAPK14
CDC5L
CTTN
ZNF16
DENR
LY6E
KRT17
TCF7
PAXBP1
NUP107
ZCCHC4
BCAR1
MRPL48
ING5
FAM83A
PLXNB2
GSN
ZMAT2
DRG2
RHCG
SKIDA1
LRRC46
BBS1
TMPRSS4
SEMA3F
NME3
MRPS34
EME2
AKAP10
UVRAG
SLC25A51
PSMC3
LY6D
SNRPB
CEBPB
GJB7
AP5Z1
ANKMY1
RNPEPL1
CSTF1
AURKA
TMEM41A
SREK1IP1
CWC27
LMNA
CDC23
E2F8
HMOX1
LRMDA
FAM240C
ZNF394
ZKSCAN5
COLCA2
KMT5B
PTPN12
PTP4A1
MRPS22
GTF3C3
MAGEF1
ANGPTL4
TIMM23
DUS2
DDX28
MRPL40
HIRA
MUC17
SIGLEC15
PRKAR2B
NFX1
ZNF341
LGALS7B
RINT1
RP1L1
PPP5C
EPS8
KYNU
PDE12
NUDT5
CDC123
FRMD7
ADAR
TIMM9
KIAA0586
TPD52L2
ABHD16B
LOC102723996
ICOSLG
XPO4
SLC25A11
RNF167
BANP
SRP68
SEMA6A
GALR2
TRIM4
RBX1
NMT1
DCAKD
TXNL4B
DHX38
ENTPD7
BOD1
UBE2L3
CDK5RAP1
PARP4
SBNO1
QRICH1
MDGA1
KCNK15
ATP6V1H
MAN2C1
C8orf58
CCAR2
MINK1
CNPY2
COPS8
ANAPC5
TTC6
FOXA1
CD63
LIF
SNX16
CD36
RBSN
PRKG2
MRPS18A
METTL1
EEF1AKMT3
CYP27B1
GABRR1
UTP3
EXOSC5
BCKDHA
PKP2
CLDN4
MIDN
DDX49
COPE
C6orf226
TIPIN
KCNJ15
ZNF26
SPRED2
UPK3B
CCDC43
SMG8
CDKN1A
CWC25
LZTS2
TPST2
SKIV2L
NELFE
SPINT3
CWF19L1
ARHGEF5
FRG2
RHOD
ZNF398
MDH1B
FASTKD2
PSG8
NUP85
MED30
DHRS13
TGIF1
LTO1
MIDEAS
RPS9
WDR97
MAF1
RPS21
DROSHA
C5orf22
PES1
PEPD
AAR2
PIGO
HSPB7
PRKCSH
CCDC151
C15orf62
LONRF3
CAPN1
S100A6
CCZ1B
SNAP47
JMJD4
PNKD
FOCAD
UBE2M
CHMP2A
SHC1
CKS1B
JADE2
TPRN
TMEM203
NDOR1
MCM7
AP4M1
TOMM6
KMT2E
ZNF384
MAGEA2B
MAGEA2
CEP162
NDUFA4
GPRC5A
TMBIM1
COMMD5
FAM153B
WDR46
PFDN6
ARL8B
C11orf86
TMEM52B
OLR1
ISG20
TRMT112
PRDX5
CBWD5
CBWD3
CBWD6
FTH1
CRYM
CRLS1
ZNF750
ERCC5
SRD5A1
NSUN2
NOP16
HIGD2A
TINAGL1
ZNF256
RFXANK
BORCS8-MEF2B
BORCS8
PERM1
SURF6
RAB5IF
SPRYD4
ATP5MC2
ZG16B
PPIL3
NIF3L1
SSBP1
GFM2
ORAI3
ZNF561
NAPRT
MROH6
NPAS1
SNRPD2
QPCTL
TGOLN2
ADPGK
EIF3D
ITGB1BP1
CPSF3
ZNF292
PRR19
PAFAH1B3
RNF19A
ZNF302
ZCRB1
PPHLN1
SLC24A1
EPYC
SNRPC
NDST1
NCDN
KIAA0319L
XAB2
PCP2
USP48
NFE2
RNF39
CBLC
MEGF8
MRPS35
WDR74
SLC12A4
COMT
MAP4K1
EIF3K
LRCH4
FBXO24
PABPC4L
C19orf84
STOML2
RUSF1
TMEM40
ZNF623
ATP5MG
DHX33
GALK2
COPS2
SKA3
MRPL57
LIN52
ALDH6A1
PHF23
ALDH18A1
PDXK
HNRNPA2B1
CBX3
SLC39A10
GET4
WDTC1
EPC2
DDX17
EIF4G2
STRBP
NUDT3
SLC25A25
WASHC2A
NAIF1
GABARAP
SEPTIN7
WASF2
WASHC2C
UBE2Q1
MARCHF9
GPR137
CDK4
BAD
GSK3B
RSF1
AAMDC
MSMO1
DAGLA
RPGRIP1L
FTO
MDM2
FAM72D
FAM72C
PMF1-BGLAP
PMF1
CCDC200
SYNGAP1
CUTA
RPUSD4
FAM118B
CLCN7
SMARCD2
EFNA3
USP49
DDX42
CCDC47
SRSF1
ILF3
SERPINI1
PDCD10
COMMD9
GBA
ATP6V1G1
MAN1B1
MACC1
RHOBTB2
SLC35A5
ATG3
OSGEP
APEX1
PTPRF
PGLYRP4
FANCA
MCOLN1
RAD9A
PDGFB
XPO7
NUP214
CLN3
APOBR
HPS5
GTF2H1
INO80C
FAM72A
AMDHD2
MFSD1
PPP6R1
ENTPD4
DVL2
LAMA3