ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976680 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◣ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MYEOV
IKZF3
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MRPL11
GRB7
TES
MAMDC2
ARID3B
TMEM199
POLDIP2
MTRNR2L1
CRBN
GRHL2
UBE3B
KCTD10
ERAL1
SFSWAP
TOMM22
MRPL45
RGPD2
RGPD1
ISY1-RAB43
ISY1
PSMD3
STARD3
CD300LF
POLR2J3
RBM48
PEX1
MTBP
MRPL13
GET3
SLC45A4
RBBP8NL
CD55
TXNRD1
PGAP3
ERBB2
SUPT6H
SDF2
UNC13D
SPAG16
TSR3
GNPTG
KAT8
STAT6
MTRNR2L9
IL1R1
LZTR1
CARD16
SLIRP
ALKBH1
ESRP2
POLR2J2
TOP3A
SMCR8
TSFM
SEMA3B
ATP5MF-PTCD1
ATP5MF
SALL4
HEXA
HES1
C1orf174
TET3
SAP30BP
RECQL5
APOBEC3B
TRA2B
CYP2A13
RBBP5
GSR
VPS50
HEPACAM2
MOCS3
DPM1
TRIB1
POLR2J
DUSP2
SRI
ZNF335
PDAP1
BUD31
TXN2
ERICH4
DMAC2
UBE2I
DNAJC11
UVRAG
RTF2
MUC3A
GFM1
RHOD
AXL
MRPS15
NCBP2AS2
NCBP2
MRTO4
EMC1
PSMD1
TRIM48
SPATA25
NEURL2
CTSA
SOCS2
DDX23
UPK3B
ANGPTL4
ERCC1
MIEN1
RPS26
CCDC97
SMN2
SMN1
YAP1
GLTP
ZNF830
CCT6B
TMEM205
RAB3D
CCDC159
TJP2
ATG9B
ABCB8
IDH3B
INO80D
LRRC47
C8orf33
RDH5
ITGA7
BLOC1S1
NAGPA
ECHDC1
SLC25A45
FRMD8
LAMP1
CDKAL1
NKD2
C19orf33
NGDN
MED6
TMC7
JMJD7-PLA2G4B
JMJD7
PDCD6IP
GSN
SEPTIN9
LRRC46
SLC35B1
SNRPE
TBRG4
ZZZ3
MAP3K7
RPL23A
RAB34
PALB2
DCTN5
TAS1R1
NOL9
PPWD1
CENPK
CENPBD1
SUPT4H1
LRRC29
DDX46
EIF3H
ZSCAN25
SAMD10
PRPF6
THAP7
ZBTB7C
ELP3
SPINK1
RPTOR
TRMT2A
RANBP1
PRKRIP1
SUPT7L
SLC4A1AP
ZNF165
ZNF383
PHAX
SPNS1
STX16
C16orf91
WASHC5
NSMCE2
ATG14
BHLHE40
SENP1
PFKM
PSME3
ZNF408
ARHGAP1
SLC25A53
SUMF1
NDUFA2
IK
C16orf74
KRR1
MEAK7
DIABLO
LAMTOR1
POLR3F
DZANK1
C5orf51
MAN2C1
FUT1
FGF21
LTO1
ANXA2
PFDN1
REXO1
ZFYVE26
RAD51B
HAGH
FAHD1
CLPTM1
PSMG2
CEP76
NDUFA9
AKAP3
VPS52
RPS18
ZNF576
IRGQ
KMT5B
GABRR1
XAB2
PCP2
RAE1
PEPD
NEMF
MRPL58
NOM1
UBQLN1
NDUFA4
SART3
ISCU
ZCCHC10
ASB2
NVL
COLEC12
NR1H2
TRMT1
NACC1
KLF10
ZNF2
TPRN
TMEM203
NDOR1
CCDC124
NOC2L
KLHL17
RCE1
ABCC10
METTL2A
EPHB3
CASC3
NOP16
HIGD2A
TRUB2
COQ4
LRFN4
ZG16B
NOL10
IRF2BPL
MMP13
DDX41
ZCCHC4
RWDD1
TIMM22
KYNU
APOBEC3H
TRAF4
GPATCH3
NOL8
CENPP
TRMO
TPST2
TATDN3
NSL1
PSMB7
SUPV3L1
U2SURP
ZGPAT
ARFRP1
SQSTM1
VIRMA
GATB
STYXL1
MDH2
RAPGEF3
GPRC5A
MAIP1
PRR3
GNL1
NXT2
ELFN2
ZSCAN22
CDC6
DOHH
CBLL1
CASP8
THUMPD1
SLC39A4
CPSF1
LRATD2
BIRC3
BRWD1
CAPN14
TFPT
PRPF31
ZNF507
DPP3
MB
PSG9
SENP5
VAC14
BCAS1
STON2
EVPLL
EPYC
PRSS22
SART1
TMUB1
FASTK
ZDHHC6
VTI1A
FAM83A
MRPS7
GGA3
BRPF1
PTP4A1
TCTEX1D4
BTBD19
RALGDS
TBL1X
DNAJC30
BUD23
GPC1
OXNAD1
DPH3
TOMM6
PCYT1A
RARB
METTL25
CCDC59
HEMK1
C3orf18
TBC1D15
VPS33A
NUP214
TSN
VGLL4
TACC1
GCN1
GTPBP4
KMT2A
H1-7
HUS1
HS3ST6
CLCN7
KLF9
ITGA2
GTF2IRD2
CDK12
EXOSC5
BCKDHA
NCAPH2
LMF2
SEC61B
WDR24
NOTCH3
CNPY2
HTRA2
DQX1
NHP2
TNPO3
PLA2G2A
SETD1B
LANCL2
EIF2S1
ATP6V1D
ABT1
COLEC11
SETD3
CCNK
LCN2
BABAM1
UPP1
EIF2D
PMPCB
ZNF212
DOK7
CCNT1
INTS1
SLPI
PSMC3
NAPB
EPS8
STMN3
RTEL1
PTPRR
TBL3
IL1RN
SURF2
SURF1
CBLC
FGF19
TIMM50
SEMA5B
RARG
MRPS11
MRPL46
PNO1
RIN1
ATF3
TMEM40
NDUFB5
MRPL47
WDR97
MAF1
AP5Z1
TXNL4B
DHX38
TMEM258
FEN1
RCOR3
FUBP3
LIMA1
TIMM23
MED23
ALKBH3
MRPL38
P3H4
FKBP10
RNF207
ZNF668
MRPL21
IGHMBP2
CLDN4
PIK3C2B
ZNF646
SYBU
BIRC2
CCDC88B
BMS1
NFKBIA
MDH1B
FASTKD2
UQCRQ
GDF9
NOL11
FLOT2
CMIP
TAGLN2
KRT17
UBE2M
CHMP2A
NOP58
OST4
BCAR1
SLC2A4RG
LIME1
GFM2
TCERG1
SNRNP200
SNIP1
DNALI1
ABHD11
ZNF524
FIZ1
ATG101
CLDN24
CLDN22
SMPD4
MZT2B
DGAT2
ORAI3
SKIL
GADD45A
YJU2
DHRS3
DNAJB12
FAM222B
KLK6
MAD2L1BP
SMYD3
DDX19A
ZXDC
RASEF
TH
ZNF544
KMT5C
TIMM23B
PARG
RAD51AP1
C12orf4
NUP107
COMMD2
GOSR2
FOXS1
EPPK1
STK19
DXO
CACTIN
SMG8
FOS
PPP1R37
PISD
CDKN2AIPNL
AMDHD2
MAGOH
SLC12A4
EXOC3L1
E2F4
KCNK15
PLD1
TFAP2C
COX16
DNAH5
SF3B3
COG4
RPL26L1
NIBAN2
ARID2
WDR53
FBXO45
THOC1
GTF2IRD2B
FAM187A
EFTUD2
CCDC103
C7orf65
MDM4
FANCD2
PDRG1
SERPIND1
TMEM41A
ICE1
SUGCT
MPLKIP
SCAF11
TEKT2
ADPRS
SMG7
BANP
NGB
RPS9
IGFL1
LEKR1
VPS11
OAZ3
SLC7A6OS
PRMT7
SLC30A6
PES1
DIDO1
SRD5A1
NSUN2
GID8
ROBO1
PPIL4
SLC39A9
ERH
RICTOR
ID1
SH3PXD2A
PIM3
SF3A3
MTIF2
TNRC18
LOC100129484
SRP19
ECH1
SEC13
FBXW2
ZBTB7B
RBPJ
ELF3
PIKFYVE
METTL2B
MUC17
SMIM12
NMNAT1
LZIC
PUS10
PEX13
FEM1A
RBSN
ATP6V1G1
EIF4H
TP53I3
CDK11B
CDK11A
PLEC
AGTPBP1
DUS2
DDX28
PLEKHG6
MYLIP
GAR1
FSCN1
SSNA1
ANAPC2
CZIB
CDC42EP4
RGS3
SGMS2
HOXA3
LENG8
SRP68
BCL9L
GALR2
ADAM8
EXOC1
EIF1AD
BANF1
DUSP6
ZMYND8
MRPL53
RAI1
ATP6V1H
FADD
MORF4L1
DHRS13
CYP1B1
PROSER1
NHLRC3
SSTR5
EIF2B2
MRPL1
GDPD4
GTF2H3
EIF2B1
RNPS1
VPS28
NUDT5
CDC123
ZNF256
BAG6
APOM
RUSF1
CBWD5
CBWD3
CWC25
TRIM4
PRKAG1
PHF23
ALDH18A1
PDXK
HNRNPA2B1
CBX3
SLC39A10
GET4
WDTC1
EPC2
DDX17
EIF4G2
DUX4
STRBP
NUDT3
SLC25A25
WASHC2A
NAIF1
GABARAP
SEPTIN7
KAT5
WASF2
WASHC2C
FRG2C
UBE2Q1
MARCHF9
GPR137
CDK4
BAD
GSK3B
ATP6V0D1
AGRP
RSF1
AAMDC
MSMO1
DAGLA
RPGRIP1L
FTO
MDM2
FAM72D
FAM72C
PMF1-BGLAP
PMF1
CCDC200
MTHFR
SYNGAP1
CUTA
RPUSD4
FAM118B
BCL3
SMARCD2
EFNA3
USP49
DDX42
CCDC47
SRSF1
ILF3
CLCN6
SERPINI1
PDCD10
COMMD9
GBA
MAN1B1
MACC1
RHOBTB2
SLC35A5
ATG3
OSGEP
APEX1
IRF2BP2
PTPRF
FRG2
PGLYRP4
FANCA
AURKAIP1
GOLM2
MCOLN1
RAD9A
PDGFB
LGALS8
XPO7
WDR74
NME1
CLN3
APOBR
HPS5
GTF2H1
PAXBP1
INO80C
CEP162
FAM72A
KMT2E
MFSD1
PPP6R1
ENTPD4
DVL2
LAMA3
PRICKLE1
SLC4A2
CDK5
IER3
FLOT1
MYCL
ZBTB45
WWOX
ATAD2
CELA3B
PMS1
ORMDL1
ST7
SLC25A11
RNF167
PCIF1
SUSD4
SHLD2
GLUD1
UBE2B
CDKL3
PIP4P1
SEPTIN5
INTS10
GP1BB
SPRED2
E2F6
TM2D2
ADAM9
WBP2
SSBP1
DIP2A
ARHGAP32
STAU2
MEMO1
UBE3C
ARID5B
MOB1B
COL23A1
STX1A
MEF2C
RRP15
SUMO3
KANSL3
FER1L5
PTBP1
TRIP4
TNC
HNRNPH2
GLA
ITGB3BP
EFCAB7
KCNMA1
UBAP2L
C1orf43
CALML5
THOP1
SGTA
PASD1
USP30
WDR62
THAP8
THEMIS2
TPP1
ETV4
B4GALT2
SH3GL1
CHAF1A
SLC33A1
THRAP3
BAIAP2
CLSTN1
EIF5A2
DHX35
ANKS6
MAGEB10
HM13
SPATC1L
DAZAP1
BSG
NDUFS7
MIER1
SSH1
XRCC5
ANKMY1
TBC1D30
GNS
SLK
ADGRB3
DENR
ACVR1B
LPCAT3
VWA7
FGGY
TMEM116
ERP29
ADGRL1
ALG6
TRIM16L
IGLL5
SKIDA1
SLC6A9
TNNC2
SNX21
MEOX1
SUMO2
NUDCD3
AAAS
SCAMP5
NFE2
LSG1
ATP6V0B
KDM7A
DICER1
ZNF497
ADAM23
TIPARP
PLAGL1
BAX
OTUD7A
FAIM
KDM3A
GTF2H4
PDE4DIP
LMAN2
RXRA
STRA6
SH2B1
HOXC13
RMND1
ARMT1
EIF3F
PSMD5
REEP4
FAM72B
TGIF1
SMARCA4
SEC22B
METTL1
EEF1AKMT3
CYP27B1
PMEPA1
RNPEPL1
SPHK2
RPL18
FAM83E
UBE2L3
STX6
NDUFAB1
KRT80
PRMT3
RABGAP1L
CORO7
PYCR2
QRICH1
FLYWCH1
TEX46
SERP1
KDM1A
EIF2A
SYNCRIP
BLOC1S4
BAHCC1
NPEPPS
ATP6V1C1
NAPA
TSC1
GFI1B
HDAC6
RARA
HSPB1
NEXN
RRAGC
TMEM18
SBK1
LARP1
SCYL3
PRAME
AP2A2
PPP5D1
NSD1
CALM3
PLXNB2
PHF19
KDM4C
TTC32
RBM39
TMEM59
TCEANC2
NOXO1
GFER
PARD6B
MYL12A
TFDP1
HOOK2
CHMP7
TMCC3
MTUS1
PECAM1
GRHL1
ZNF33B
PRKCA
TMCC2
LUC7L2
CAPRIN2
SFXN1
KLHL12
LYPLA1
MAN2A2
KDSR
DRC7
PEAK1
HMG20A
NFU1
TINAGL1
LFNG
INKA2
EPB41
RTN4
NUF2
C8orf58
NR5A2
NSF
MARVELD1
BNIP1
RNASEK
LRRC23
C17orf49
SAP30
PLEKHH2
RNF223
BACH2
WNK1
HSPA9
CBX7
RPS11
FBXL3
AFF4
MKLN1
NOTCH2NLC
MINDY2
RPS14
JMJD1C
CHD7
CSTF1
AURKA
WWP1
SMYD1
CSF3R
USP28
FASN
UBE2E2