ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089506 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX20532172: hESC H1

◢ SRX20532173: hESC H1

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◣ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

DUX4
BCAS3
NPAS4
HEATR6
PARD6B
TUBD1
RPS6KB1
PSMD6
CNOT3
ARFGEF2
TTC24
IQGAP3
BRIP1
ZNF217
EEF1AKMT3
METTL1
CYP27B1
PFDN4
BCAS4
TSR3
GNPTG
USP32
MOK
DYNLRB2
ALKBH2
UNG
HIPK1
XKR7
SUMF1
TRIM37
FBXO32
SLC12A9
APPBP2
FBXO5
PPM1D
SKA3
MRPL57
TEX14
RAD51C
NCOA3
COL23A1
NAGPA
C3orf14
SMYD5
PHTF1
MCM7
AP4M1
VPS50
HEPACAM2
SFSWAP
DHX40
C8orf33
CSTF1
AURKA
C12orf66
CA4
SCRT1
DGAT1
CCT2
BARHL1
SAP30BP
RECQL5
EPN1
CREBRF
CRBN
RAD54B
TRIM33
UTP20
WDR4
PTPRN2
YPEL2
TCTN2
FANCI
RUVBL1
PGBD5
ATG14
ITPRIPL1
NCAPH
HSDL1
DNAAF1
HSF1
BOP1
RMDN1
CPNE3
HTR5A
SPATA25
NEURL2
CTSA
ZSWIM1
ART1
MCM10
NUP214
IQSEC3
HCFC2
GLT8D2
ATXN7
THOC7
SGO1
RNF166
CTU2
RAE1
MTRNR2L3
SLC37A1
RSPH1
TROAP
ZNF331
CCNB1
ZFYVE1
TOMM70
LNP1
CPLX2
PUF60
CEP128
SMG8
NGDN
FAM214A
RRP15
CLTC
ZFYVE26
RAD51B
NCKAP5L
RAB22A
BIRC5
DDX42
CCDC47
DYRK1B
SMIM41
ATG101
CCNA2
POLR2J3
TRMT61A
CKB
PPM1E
CCNG2
KCNJ14
GRWD1
TRIP13
BRD9
TTF2
ATXN1L
TTK
MAMDC2
MAX
SLC45A3
VARS1
DYNC2I1
SPPL2A
FRG2
RNF40
CCDC189
DCLRE1B
AP4B1
FBXL3
INCENP
XRCC2
CYB561D1
KAT2B
INSM2
YIF1A
TMEM151A
SKA2
PRR11
TADA2B
CCDC96
MAD1L1
NUDT1
MRM2
MED20
BYSL
USP10
FAM91A1
STOML1
PML
KLHDC4
SPTLC1
UBE3B
DDX11
TTLL11
TUBB3
MC1R
MFSD1
GMCL1
C16orf71
ANKS3
C16orf46
AEN
NEMP1
TMEM208
LRRC29
ZC3H18
EBAG9
EIF1AD
CST6
BANF1
CENPBD1
TMOD3
NAA25
ANGEL1
ZEB1
VRK1
L1CAM
CBLL1
NDUFAF6
CCNE2
LOC101928764
METTL3
MRPL52
MMP14
WASHC5
NSMCE2
LZTFL1
NUP107
SART1
POLR2K
SPAG1
GFOD2
ANKRD46
RNFT1
LYSMD2
TMOD2
ECT2
NOL8
CENPP
MAPK8IP2
CORO7-PAM16
CORO7
DNAJA3
CHUK
SAXO2
EFL1
TDRKH
TRIM4
VGF
SLC35A1
AP1S1
TTC27
RRP1
SKIV2L
NELFE
HAUS7
RPP40
UBE2C
TRMT61B
MOCS3
DPM1
AUH
ARFGAP1
EDC4
PRKAR1A
ACOX3
INTS1
DHX37
BRI3BP
PPM1B
FANCD2
EXO1
RABL2A
NET1
TUBAL3
TACO1
FRG2C
DLGAP5
DDX49
COPE
DUSP15
RHEBL1
KMT2D
TOMM22
RRP36
MEA1
KLHDC3
SYVN1
TAF5
COQ10A
ANKRD52
HMGCS1
SLC15A4
KIFC1
MAST1
RTBDN
SIKE1
CYP51A1
PTGFRN
SRGAP2C
FAM72B
HAGH
FAHD1
CCDC146
TF
TOPBP1
NKX1-1
ATAD2
STRN3
AP4S1
UTP23
PPP1R12B
UBE2T
EIF3H
STX16
FIS1
MCCC1
CLDN15
SLC35B1
SLC25A40
DBF4
ATG7
PDE4DIP
C20orf27
GSKIP
ATG2B
DDX19A
ASNS
NUB1
USP39
C2orf68
MKI67
RNF181
TMEM150A
DSCC1
FOXH1
PPP1R16A
OSGIN2
DCAF4
ZFAND2A
POLR2J
ZHX3
FAM72C
ASPM
KIF14
AP4E1
FAM180B
NDUFS3
KBTBD4
ADAR
LCMT1
AMZ2
TCP11L2
PSMC1
SF3B3
COG4
GTF2H3
EIF2B1
EIF3C
EIF3CL
LZTS2
TWNK
MRPL43
RGS14
LMAN2
TBC1D13
VIRMA
SLC25A24
CDCA4
TBX2
SGO2
THOC3
ATP6V1C1
ANAPC7
KLHL24
DUS4L-BCAP29
DUS4L
COG5
DCAF7
SRPK2
EIF2D
SUPT7L
SLC4A1AP
POLE3
C9orf43
ALAD
SNRPC
TPTE
SRGAP2
FAM72A
GDPGP1
CIB1
TDRD9
ATP5MPL
MED13
TRAPPC10
TSFM
EMC9
EFCAB6
RNF31
PSME2
POU5F1
TCF19
CCHCR1
ZC3HC1
U2SURP
LEKR1
RPGR
METTL2A
GNA13
NDE1
MARF1
ARMC2
ZHX1-C8orf76
ZHX1
RHBDD2
INPP5K
NANS
VAPB
UNK
H3-3B
C8orf76
PSEN1
VANGL1
CKAP5
HOMEZ
IARS1
PDXDC1
ZNF529
RACGAP1
RFC2
NOTCH2NLA
ATP5MG
TERF2IP
KARS1
ZC3H3
H1-10
ESPL1
GLRX5
TBC1D30
GNS
PRPF18
CYP2W1
COX19
NTNG1
PDSS1
FRAT2
URM1
DNAAF4
CNIH4
TBC1D23
SPG7
DZIP3
CIP2A
KPNA2
MIS18A
CMC2
CENPN
SPC25
TIGD5
EEF1D
CSDE1
KIF18B
NOL6
POLQ
DNASE2
KLF1
GCDH
RFC3
GLE1
FANK1
CCDC59
BICDL1
CPSF1
SLC39A4
FBXO33
MDM1
TSEN54
LLGL2
EEF1E1
C1orf54
APH1A
TMEM18
RSL24D1
SQLE
BMP7
RABL2B
SRGAP2B
FAM72D
GTPBP4
PEPD
HEATR5B
GPATCH11
NOTCH2
XPOT
DNAJC21
SH3BP5
COPZ1
TM9SF1
IPO4
RTF2
VCPKMT
MBTPS1
RFWD3
ROPN1L
GOLGA5
SMARCA5
B3GNT2
DDX21
AGFG2
KIAA0895L
EXOC3L1
E2F4
YWHAG
CCDC15
AZIN1
ELMO3
ITGB1
COX5A
DNAL1
ARPP19
GPSM2
CCDC86
EDC3
CDK1
MRPS23
SSBP2
ZNF789
ATP5MF-PTCD1
ATP5MF
PCNX3
MAP3K11
INTS8
BFSP1
GNPNAT1
DSTN
MYL5
ATP5ME
NME1-NME2
NME1
GPATCH4
NAXE
ZBTB9
NHP2
RMC1
NBPF11
PIAS3
PRIM2
KCNH6
ARHGEF5
C6orf89
TSEN2
PPIL1
MXD1
ACTR3
SLC25A26
FZR1
DOHH
USP30
FAAP24
CEP89
SUB1
PHTF2
TMEM60
ENDOV
GABARAPL2
OAZ3
AARS2
MRPL9
PROS1
ARL13B
SH2D3C
NUDT3
CDK9
CDC14B
NDUFV1
SPDYE6
LOC100289561
GFPT1
E2F5
SSR3
MFSD14B
TBK1
SMIM5
SPATA2L
RRM2
IPO11
DIMT1
FAM227B
DTWD1
DBNL
PDF
NIP7
COG8
DYNC1I2
LRFN4
PDAP1
BUD31
KLF10
FAM185A
ZFAND3
HAUS5
TRPM7
TMEM262
ZFPL1
CDCA5
TIMELESS
MIP
BBS1
IDH3A
AFTPH
SWI5
GOLGA2
CNIH1
VIPAS39
AHSA1
PRMT6
CTDSP2
CMTM6
DUSP11
C2orf78
MTRNR2L2
MSH3
DHFR
MAD2L1
DUS2
DPEP2NB
DDX28
NOC4L
DDX51
OXNAD1
DPH3
CCT5
ATPSCKMT
THAP11
OS9
PTPN1
NAA20
GATAD1
NDUFS6
MRPL36
HELZ
EIF1AX
WDR77
ATP5PB
NBPF12
TRIM45
MTFR2
URB1
SPATA33
SEL1L
WDR37
IDI1
PSMC2
DNAJC2
TSSK4
MPHOSPH6
DNAAF2
PSMB7
HPS3
CORO1C
ZNF585B
ZNF383
ZNF706
IFT22
GPR146
DIP2C
QTRT1
LYRM4
FARS2
VPS9D1
DEPDC1B
TUBA1A
TRIM65
MRPL38
ZDHHC17
SETDB1
KMT5A
RNF19A
SHCBP1
TICRR
PLK1
DERL1
TMED8
SAMD15
PYCR2
MMS22L
NOTCH2NLB
PSMD4
PCLO
DENND2C
HJURP
COPS3
SEC22B
LIN52
ALDH6A1
VPS13B
SELENOS
CAMKK2
SLC39A2
METTL17
RPL30
CDHR2
RNF44
RRP12
REXO4
ADAMTS13
MKS1
WDR35
RPTOR
RAB1A
TP53INP1
MATN3
DNAJC25-GNG10
DNAJC25
NPM1
RFX1
UTP18
MBTD1
LINS1
ASB7
TOGARAM1
KLHL28
CDK5RAP2
GMFB
AGK
PLCL1
PTRHD1
CENPO
COMMD1
LTO1
CALCOCO2
UBR5
ZSWIM3
ACOT8
RNF139
SUMO3
NUF2
NEIL3
HSPA9
RTEL1
SH3BGR
LCA5L
RAB5B
PMEL
CDK2
USP14
SNF8
TARS3
SKP2
LMBRD2
UQCRC2
MROH1
NAMPT
NFAT5
TRIM59
RANBP9
RETREG1
FERMT2
UBXN11
INKA2
DDX20
TBC1D15
ZSCAN2
LRRC37A3
TEX10
STX4
ATP1A1
ZNF281
TRMT1
NACC1
SPNS1
LAT
TRUB2
COQ4
FBXL13
ARMC10
NRAS
TMEM129
TACC3
SLBP
TM2D3
ZNF79
MDM2
SLC35A2
PIM2
TECPR1
UBXN7
BCKDK
KAT8
ECSIT
RXYLT1
PYCR3
GFUS
S100A13
S100A1
CHTOP
RNF114
POLR2J2
NARF
CYBC1
MRPL22
GEMIN5
RNF10
PITX3
GBF1
USP8
SCRIB
PLEKHN1
NOC2L
KLHL17
COQ5
SUSD6
TXLNG
ZC2HC1C
ACYP1
MUC3A
BLM
ZAR1L
BRCA2
POLR3F
DZANK1
GAR1
CFDP1
SCRN3
CIR1
FANCC
ZNF212
ARSG
SLC16A6
NRBP1
TEX2
SLC31A1
FKBP15
CUL2
OXR1
STK38
PREX1
MND1
AP5Z1
ATP5F1E
VPS11
TOP1MT
CS
PRELID3B
RBM25
POLR3GL
ANKRD34A
LIX1L
CYB561
DLD
AP2A1
TSKS
TRIM56
RHPN1
RAD51
CKAP2L
SRPRB
NCAPG
FKBP3
FANCM
TMED5
CCDC18
ZNF473
VRK3
HSPA5
TMEM183A
TMED10
SDE2
LSM14B
EEF2K
PTPRH
TADA3
ARPC4-TTLL3
ARPC4
CYB5R1
ADIPOR1
STRIP1
C14orf28
MAP2K2
EHBP1
WIPI2
DISP1
CALB1
FBXW8
SLC25A19
TMEM249
SLC52A2
FBXL6
ELAC2
CNBP
KNOP1
IQCK
PUS1
UBE3D
DOP1A
RECQL4
LRRC14
LRRC24
MFSD3
MFSD4B
RFC1
ASCC3
CGGBP1
FAM162A
CCDC58
SPOP
ACBD3
MTG1
CBLB
ZNF654
UPF2
LGALSL
PHETA1
HELZ2
SECISBP2
CKS2
GTSE1
PCOTH
MIPEP
C1QTNF9B
CFAP298-TCP10L
CFAP298
RNMT
FAM210A
WWP2
NOB1
DPAGT1
SLC35A5
ATG3
H2AX
CHPF2
ABCF2
C2CD2L
RPL32
SPTLC2
CEP164
SNX11
CBX1
CELF6
FSD1L
POC1B-GALNT4
GALNT4
SLC27A3
SNX4
PPM1H
PAWR
VAC14
STYXL1
SSNA1
ANAPC2
EIF2S1
ATP6V1D
POLR3B
FBXO43
NARS2
TONSL
SENP5
STRN
VWA3B
CSRNP2
IMPA1
SLC10A5
MTCH1
PXT1
KCTD20
TNNI3
NEU3
DNAAF3
AURKB
PIGU
IREB2
GATB
RAD18
GPD1
COX14
THBS3
MTX1
ZBTB11
RPL24
XPC
LSM3
NBN
JMJD1C
GUK1
GJC2
YY1AP1
DAP3
C7orf50
GPATCH2L
BDH1
HELLS
ZNF888
LDLR
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
NEK2
CORO1A
WIPI1
WDR43
CNPY3
RAB41
PDZD11
KIF4A
SF3B2
GAL3ST3
ZBTB6
RC3H2
ZNF263
ING4
DMPK
YWHAZ