ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089502 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◣ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

DUX4
PTPRN2
CNOT3
EPN1
COL23A1
FRG2
MAMDC2
ART1
DRD4
FRG2C
MUC3A
OPRL1
RGS19
LKAAEAR1
LGR6
UCKL1
MTRNR2L8
DYNLRB2
CRYAA2
CRYAA
RBM48
PEX1
USP32
TPTE
HEATR6
ZNF217
BRIP1
BTNL9
TRIM37
TUBD1
RPS6KB1
ARFGEF2
SNX16
SCRT1
DGAT1
PFDN4
SMG8
NCOA3
NPAS4
PSMD6
C8orf33
CRBN
APPBP2
EIF3H
PARD6B
HIPK1
SFSWAP
PPM1D
ALKBH2
UNG
CCNA2
UTP20
CRNKL1
CFAP61
MTRNR2L1
FBXO5
NUF2
HTR5A
MTFR2
QTRT1
TTC24
IQGAP3
SGO1
CCNG2
TRMT1
NACC1
EEF1AKMT3
FANCD2
METTL1
CYP27B1
ITPRIPL1
NCAPH
BIRC5
RRP15
UTP25
SMYD5
SCFD2
WDR4
CCDC86
SLC12A9
RRP12
FAM72C
RRM2
STAT1
RABL2B
CCNB1
RAD51
C16orf71
ANKS3
WASHC2C
NAGPA
EXO1
TMEM262
NME1-NME2
NME1
BCAS3
CCT2
C12orf66
AURKB
KIF18B
KIF20A
BRD8
URB1
SRGAP2B
FAM72D
RBM19
ZFPL1
CDCA5
SRGAP2C
FAM72B
CDC25A
DZIP3
CIP2A
KCNJ14
GRWD1
CKAP2L
SRGAP2
FAM72A
TM9SF1
IPO4
CCNB2
VPS33A
GNG14
SKA3
MRPL57
TTC27
POLR2J3
NEIL3
WDR74
STX5
SLX1B
SLX1A
BOLA2B
FBXW9
KLHL18
KIF9
SHC1
BOLA2
DHX37
BRI3BP
MCM7
AP4M1
WASHC2A
BLM
SULT1A4
SULT1A3
LTV1
CDK7
FANCI
PSME3
BECN1
SUMF1
FLAD1
CKS1B
ESCO2
NEK2
RIPPLY2
CYB5R4
MAD2L1
NOL6
NUP214
BOLA2-SMG1P6
XKR7
XRCC2
SHCBP1
HEXA
MTRNR2L2
MSH3
DHFR
SPTAN1
NOL8
CENPP
MOK
RAD54L
TTK
EDC3
TRIP13
BRD9
C16orf46
SKA1
CORO1A
KPNA2
GTF2H3
EIF2B1
RABL2A
ACOX3
TICRR
EBNA1BP2
CFAP57
CEP135
TRMT6
MCM8
RTN4RL1
DPH1
PPAN-P2RY11
PPAN
ANGPTL6
TMEM186
PMM2
GPATCH4
P2RY11
NAXE
NAT10
MIS18A
UNC45B
NLE1
EXOSC5
BCKDHA
SPNS1
LAT
IPO11
DIMT1
NBPF1
BUB1B
VARS1
MRPL27
EME1
KIF15
KIAA1143
TBRG4
ZMPSTE24
FAM161A
DYNC2I1
SECISBP2
CKS2
SPATA25
WASHC5
NSMCE2
IQSEC3
NUDT15
NEURL2
CTSA
POLQ
KIF2C
TTF2
ATP6V0D1
AGRP
DCAF4
ACTR6
TRIP4
PCLAF
DDX31
GTF3C4
SMC2
LZTFL1
RNF166
CTU2
ZSWIM1
TRUB2
COQ4
NDUFAF6
RNF40
CCDC189
PIGU
TROAP
TMEM248
KIAA0895
POLR1B
KNOP1
IQCK
USP2
DLGAP5
SPCS1
GLT8D1
HAGH
FAHD1
CYB561D1
HMGB1
UFD1
CDC45
CCNE2
NOP16
HIGD2A
ELOVL1
CDC20
ANLN
NUDT2
KIF24
UBFD1
EARS2
LYRM4
FARS2
HCFC2
GLT8D2
TRMT61A
CKB
PMS2
AIMP2
PBK
NOL7
MCM10
SUPV3L1
PRCP
DDIAS
KCTD9
CDCA2
VTA1
NMBR
WDR46
RGL2
PFDN6
CENPW
HEATR1
UBXN11
RPP40
KIFC1
CPLX2
POLR3D
POU2F1
KIF23
TMCO2
CDK1
PLK4
PRR5L
DYRK1B
DNASE2
KLF1
GCDH
POC5
GPN2
PNO1
SGO2
GBA
TMEM208
LRRC29
DNAJC25-GNG10
DNAJC25
DHX40
TAF13
PUM3
URB2
TAF5L
GPATCH3
CDC6
ATR
SNRPE
DUS2
DPEP2NB
DDX28
CSTF1
AURKA
COMMD9
UBE2C
H3C15
H3C14
H2AC19
H2AC18
H4C15
H4C14
ULK4
GTSE1
MDN1
SLC35B2
TFB2M
CNST
RDH5
DPH2
B4GALT2
ATP6V0B
ASPM
DDX11
ZNF778
PCOTH
MIPEP
C1QTNF9B
IMP4
CCDC115
COX6A1
DDX49
COPE
TADA2B
CCDC96
LOC102724770
DGCR6
ZNF497
A1BG
DDX21
TDRD7
LMLN2
RNASEH1
TRIAP1
HSP90AB1
INTS7
DTL
EIF3C
ODF2
SHQ1
TTC26
MYBL2
TSFM
MRTO4
EMC1
SSBP1
FAM227B
DTWD1
UGGT1
MAK16
PNPT1
SLC25A26
EIF3CL
EIF2D
UTP4
MAST1
DERPC
CHTF8
WFDC3
DNTTIP1
COG7
ITGA7
BLOC1S1
ZNF331
SASS6
RTBDN
DDX19A
WDR62
THAP8
ADHFE1
C6orf89
HM13
SRPRB
IREB2
DUSP15
CASP8AP2
PPP2R3B
GATB
WIPI1
RRS1
TDG
C12orf73
BUB1
DCLRE1B
AP4B1
GFM1
TRMT61B
PBRM1
GNL3
PUS1
UTP15
ANKRA2
ATG14
ZNF358
LSM12
G6PC3
ARMC2
RBM28
LOC101928764
CREBRF
VAC14
CEP55
MCOLN1
LSM5
AVL9
LAMP1
CENPS-CORT
CENPS
KNL1
RTTN
TRIP12
FBXO36
FBXL13
ARMC10
TRAPPC6A
BLOC1S3
MND1
RNF187
ZGRF1
LARP7
PWP1
ZFYVE1
MRM3
GLOD4
TRMO
NOL10
RHEBL1
PGBD5
THOC3
DIAPH3
MFSD1
PPRC1
ZNF688
NAGK
C5orf51
DBNL
PCNA
NEMP1
KAT2B
FAM53C
CDC25C
BRCA1
HSPA9
TFIP11
TTLL11
CHCHD1
TMEM242
LZTS2
RBKS
BABAM2
PRMT2
ATAD2
PINX1
THADA
MARCHF8
CEP43
KDM5B
PAXBP1
DYNLL1
SNRPD1
IARS1
ENDOV
PPIL2
OGDH
FARSB
ITGB3BP
EFCAB7
KMT2D
KLHDC4
TSR3
GNPTG
NKX1-1
BBS5
TWNK
MRPL43
NPM1
DHODH
PKD1L3
ASF1B
XRN2
VRK1
TSEN54
RAD18
SYNJ1
TMEM230
CFAP298-TCP10L
CFAP298
ZGLP1
LLGL2
FDX2
DDX42
CCDC47
CASKIN2
MRPS23
MRPS35
ECSIT
TOMM40
OIP5
NUSAP1
GSN
CNN1
PRMT1
MRPL3
ANAPC10
ABCE1
RCL1
RTEL1
STIL
SETD4
CBR1
QTRT2
CCDC191
LIN28A
FZR1
HMGB2
YARS1
S100PBP
CLSPN
WDR36
KCNIP2
COMMD4
MAPK8IP2
DOHH
AEN
PSMD9
HPD
DUS3L
CFAP410
RUVBL1
CASC3
E2F3
GTPBP4
DHRS11
LTN1
POLR3F
DZANK1
INSM2
ZBTB9
CCDC146
RIOK1
CAGE1
PRR22
CDCA8
C1orf109
NCAPG
LRRC59
INO80
CDS2
ZAR1L
BRCA2
VPS50
HEPACAM2
MRM1
BARHL1
IFT57
MVK
SLC25A51
AGFG2
IFT46
ARCN1
CMC2
CENPN
NRL
RFC3
TTLL4
GTPBP6
STK11IP
FAM200B
ZNF593
C1orf232
RAB14
MARS2
UBE2Q1
CHRNB2
SUGP2
ARMC6
AP5Z1
NOC4L
DDX51
CBWD5
RRP1
STMN3
TEKT2
ADPRS
RAD51AP1
C12orf4
PISD
ATP6V1C1
ZSWIM8
NDUFS7
CAMTA1
USP39
C2orf68
CCDC77
USP30
HSDL1
DNAAF1
RPUSD4
FAM118B
MRPL4
NTAQ1
ESPL1
SEBOX
L1CAM
CENPM
PIP4P1
AXDND1
NRAS
LARP4
FAM186A
RNASEH2C
KAT5
SECISBP2L
NCLN
BRSK1
HSPBP1
RPIA
PPIH
SRA1
GNL2
UBA52
MMUT
CENPQ
MPHOSPH10
MCEE
RTF2
NUP107
ZWILCH
SNAPC5
RPL4
PARPBP
NUP37
MKI67
TAF4B
FBXO32
CDC37
STYXL1
TSEN2
CCDC116
GMNN
GLRX5
TMEM129
TACC3
SLBP
RPSA
TOMM22
PDE8A
RHNO1
FOXM1
TMEM199
POLDIP2
S1PR4
TFPT
PRPF31
OSGEP
APEX1
UTP23
ABCF1
CPEB4
RAD9A
RPS29
SLC35A4
APBB3
FBXW8
SLC39A6
EEF1E1
ZSWIM9
LIG1
TSN
SLC37A1
ITFG2
GTPBP10
SKA2
PRR11
ZBTB17
UBN2
DNA2
TIPARP
PHB2
TIMELESS
MIP
KLHL32
TMEM231
PDXDC1
CNKSR1
VPS35
YIF1A
TMEM151A
POMZP3
POLR2K
DHX33
CWC25
GAR1
RNMT
FAM210A
NUP35
SEC14L1
MED20
BYSL
INKA2
C12orf45
ARID3B
SOD2
NET1
SKIV2L
NELFE
RNF181
RRP36
MEA1
KLHDC3
PPP1CA
ADAT1
XPO5
POLH
MTR
TMEM150A
OXNAD1
DPH3
REXO4
ADAMTS13
STAM2
SAR1B
CELSR3
PPIL1
DNAH7
PRKAR1B
WDR43
SSNA1
ANAPC2
ADK
LRRC73
DDX20
UNKL
WDR61
TEX14
RAD51C
LARS2
FAM174A
LAP3
WWP2
NOB1
IQCG
SRD5A1
STX18
CBWD3
PACRGL
SDAD1
IQCH
AAGAB
SLF2
TOR1A
CFAP299
ASNS
PPT1
DCAF11
ADPGK
ZBTB49
LYAR
PTRHD1
CENPO
ZNF23
AP3D1
TRMT5
SLC38A6
PC
PDE6D
COPS7B
RGS20
LSG1
FAM187A
EFTUD2
CCDC103
FKBP3
FANCM
REXO5
ERI2
GDAP1
CFDP1
DHDDS
ZNF529
SLC25A1
GGNBP2
ATXN7L2
ARHGAP11A-SCG5
ARHGAP11A
CNPY3
YIPF3
POLR1C
OXSM
NOXO1
NGLY1
WDHD1
SOCS4
TMED5
CCDC18
CLTC
ZNF202
SLC35C2
KIF14
MON1A
CNOT4
PLK1
SPG21
DBNDD2
MRPS16
ANKRD42
RANBP6
KIAA2026
METTL3
POLR1F
TXLNA
GPD1
COX14
DPP8
PALB2
DCTN5
SPAG1
DDX18
PARG
LMLN
ZC3H18
NEU1
C6orf47
TTC7A
MCFD2
ATP6V1H
HSPH1
SHOX2
SF3A3
SPC25
E2F8
RSPH1
FKBP1A
NCL
MRPS18B
ATAT1
DNAJC9
MAD1L1
CARS1
NOLC1
SMIM41
SUPT7L
SLC4A1AP
RPF2
SLC25A32
DCAF13
TOM1L2
DRC3
NPIPB15
TMEM167B
PUS7
WDR81
EIF4H
HASPIN
EIF2S1
ATP6V1D
NUDT1
MRM2
POLE3
CRCP
C9orf43
ALAD
LRP2BP
CSE1L
MAP3K7
ROM1
EML3
B3GAT3
WDR3
GDAP2
TCTN2
ANKRD37
SPTLC1
FAM180B
STAT3
LAMTOR5
SARS1
PIMREG
RPL6
PTPN11
ATP5F1E
RAD54B
MYO19
MIER1
DNAI4
CDK5RAP1
EIF2B3
CEP162
KDM5A
EBAG9
QSOX2
PLEC
BRMS1
KIAA0895L
PABPC1
TRIT1
DBF4B
NDUFS3
KBTBD4
KLHL12
CENPF
UBIAD1
TBL3
RPS2
RNF151
ZSCAN22
SPATC1L
NUDCD3
PDF
NIP7
COG8
ASH1L
CRLF3
ATAD5
BRIX1
APOM
DSCC1
RINT1
SCAMP4
ADAT3
RIOK3
BZW2
SPRYD4
TAF10
SLF1
RIN1
NHP2
KIAA0825
PEPD
ERLIN2
THAP5
DNAJB9
RRP9
PARP3
ING5
CDKN2C
GABARAPL2
NOM1
UBE3D
DOP1A
FIS1
ZNF771
EIF1AD
CST6
BANF1
FAF1
KTI12
SMC4
IFT80
TFAP4
INTS12
GSTCD
WDR53