ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9187409 | MIA Paca-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◣ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

FRG2C
SNX16
NPAS4
COL23A1
HTR5A
FRG2
TDRD7
CPLX2
CAMTA1
SLC39A3
MAMDC2
DUX4
MTRNR2L1
NEK2
TTC24
IQGAP3
TMCO3
DCUN1D2
PDE6D
COPS7B
IQSEC3
GTPBP6
TRIP13
BRD9
GSN
RAB14
SRA1
SLC35A4
APBB3
MAPK8IP2
MRPL44
ART1
XKR7
TMEM41A
PSEN2
POLR2J3
POLQ
SRRM3
WASHC2C
RIPPLY2
CYB5R4
PGBD5
MTRNR2L2
MSH3
DHFR
CCNG2
DDX11
TMED9
B4GALT7
NUF2
CENPW
EXO1
TMEM242
THOC3
L1CAM
MTRNR2L8
CHGB
ZNF555
TRMT61B
SKA3
MRPL57
NUDT15
KIF18B
SCRT1
DGAT1
SHCBP1
BTNL9
ITPRIPL1
NCAPH
FBXO5
SPNS1
LAT
PEX3
ADAT2
CCNB1
PHRF1
CCDC92B
ENPP3
MED23
RNF166
CTU2
RUVBL1
EEFSEC
CKAP2L
BIRC5
RHNO1
FOXM1
GTF3C3
C2orf66
BRIX1
RRP15
MRM3
GLOD4
CENPS-CORT
CENPS
ATG14
XRCC2
ANKHD1-EIF4EBP3
ANKHD1
SLF1
KIAA0825
C8orf33
SMC2
HEXA
NOL8
CENPP
KIAA0895
ANLN
BARHL1
NDUFS7
TTC26
ACBD6
DEPDC1
VRK1
OPA1
PBK
FAM24A
SIGLEC10
ESCO2
EIF2D
WDR36
NOTCH2NLC
RTTN
NAGPA
UNC45B
NLE1
SMG8
FANCD2
MCM10
STX18
ZNF558
H6PD
MBD3L1
COMMD2
DUS2
DPEP2NB
DDX28
AGK
MAD2L1
POLR3H
STX16
DIAPH1
SPATA25
NEURL2
CTSA
ZSWIM1
CYP4F11
NSUN4
AURKB
CEP43
SKA1
MKI67
CCNA2
MRPS35
FAM72C
QTRT1
EDC3
NSA2
GFM2
NSFL1C
MTF2
ZNF778
PKD2L2
SGO1
METTL3
GTF2H2C
GTF2H2C_2
MRPL39
ZNF391
MRI1
C19orf53
RNF187
CPEB4
MRPS14
TTK
TSR3
GNPTG
BBS5
NBPF1
GBA
ZNF358
MCOLN1
PPIH
CWF19L1
WASHC2A
CEP55
OSCAR
NDUFA3
DNAJC25-GNG10
DNAJC25
CDKN2AIPNL
TIPARP
SF3A3
SRGAP2
FAM72A
TATDN3
NSL1
PGAM5
KIF20A
BRD8
HUS1
WASHC5
NSMCE2
ZNF688
C17orf75
ZNF207
PIK3CD
COX6A1
TRIAP1
SAR1B
NOTCH2NLB
SRGAP2C
FAM72B
CDK7
GTF2H2
PRR14
FBRS
SEC24B
MRPS23
NDUFAF5
ESF1
ATF6
MIS18BP1
FAM207A
SZRD1
DDX18
PAXBP1
IFT46
ARCN1
SERPINB6
TFAP4
ADAMTS14
PARL
AARS2
SASS6
RRM2
MFAP3
FAM114A2
C5orf51
STX6
DRG2
HINT3
MIS18A
H3C15
H3C14
H2AC19
H2AC18
H4C15
H4C14
COMMD1
GGH
ASF1A
ZGRF1
LARP7
MRPL21
IGHMBP2
STAT1
ZFYVE1
TF
TOPBP1
GPATCH1
RABL2A
ELOVL1
CDC20
DTX2
SSBP1
VPS9D1
ATG5
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
RGS20
ATP6V1H
NMNAT1
LZIC
ISY1-RAB43
ISY1
ATP6V0D1
AGRP
DCLRE1B
AP4B1
RAD51
OAZ3
MRPL9
JUNB
HOOK2
FBXW8
TRIP4
PCLAF
TTLL4
ZNF77
SMARCD2
CCNB2
BUB1
SYNJ1
VPS50
HEPACAM2
PIMREG
AIPL1
STX7
UTP20
USP30
DDX46
SLC47A1
RAPGEF6
NOXA1
MTFR2
SMC4
IFT80
CCDC88A
CDC25A
CCDC200
C17orf49
RNASEK
BCL6B
URB2
TAF5L
POU2F1
DISP2
PHGR1
DNMT3A
NOM1
CENPH
ANKRD31
NME1-NME2
NME1
PDE11A
RBM45
BRF2
LMNB2
KIFC1
EAPP
SLC35A3
C1orf54
APH1A
IDH3B
STIL
MRPS31
TTLL11
VPS35
ZSCAN22
DCAF10
SSNA1
ANAPC2
ICMT
HES3
GTSE1
SRFBP1
TMEM171
HEATR1
CDC14B
YBEY
MCM3AP
ZNF410
SLC44A1
EFNA5
DLGAP5
SRGAP2B
FAM72D
NEIL3
DIO1
MUC20
CXCL5
ITGB3BP
EFCAB7
LRRC37A3
ALG10
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
FANCI
BOLA2-SMG1P6
CFAP298-TCP10L
CFAP298
ARHGAP45
UTP25
ASPM
NEURL1B
FAM166A
STPG3
NELFB
GAA
PPWD1
CENPK
MARCHF8
MRPL3
CREG1
SUPT7L
SLC4A1AP
MAP3K7
SELENOT
RBBP5
TBC1D19
LMOD1
TIMM17A
POLR3G
MBLAC2
GIT1
ANKRD13B
NCBP3
ADAM15
PTK7
SECISBP2L
GNAL
FAM111A
SLC33A1
TOX4
RAB2B
TNFAIP8L1
PEPD
WDR53
FBXO45
KXD1
NOTCH2NLA
DLGAP3
TSEN54
LLGL2
CASKIN2
CRLF3
ATAD5
RAD51AP1
C12orf4
NUP35
PFAS
OR6B2
NDUFA10
PRKCQ
KCTD18
RARS1
MPHOSPH10
MCEE
NKX1-1
ZAR1L
BRCA2
ZNF23
TTC4
THAP10
LRRC49
DNAJC11
MACIR
PUS10
PEX13
FBXO4
SYT5
TCTN3
THEM4
TRMT1
NACC1
TTF2
TXLNA
TAF3
FRA10AC1
TRMT61A
CKB
FXN
MRPL27
EME1
METTL15
KIF18A
PLK1
LAMTOR5
DPYD
KIAA0895L
INTS12
GSTCD
EXOC3L1
E2F4
MRPL40
HIRA
ZNF800
CORO1A
TRMT5
SLC38A6
NUP54
TBC1D13
GTF3C5
PPIA
CEP120
ZBTB33
MYBL2
GFM1
ATP7B
ALG11
SDHAF3
LSM11
DBF4B
CENPF
NGDN
STX8
CFAP52
NOL10
ZSCAN25
CFAP299
HASPIN
FAM180B
NDUFS3
KBTBD4
BEND3
DZIP3
CIP2A
PRR5L
COMMD9
FAM174A
SLC25A46
BDP1
BNIP1
MED4
ZBTB17
KLHL20
VTA1
NMBR
RGS14
LMAN2
OLFML2A
NR6A1
NAE1
ACSF3
KDM5B
PCBD2
LGALS8
REXO4
ADAMTS13
SRSF11
LRRC40
CCDC91
IQGAP2
DYNC1I2
HNRNPH1
PLS1
MAST1
RTBDN
TEKT2
ADPRS
FKBP3
FANCM
CREBL2
AP3B1
WTIP
PPP2R3B
TMED5
CCDC18
WDR27
C6orf120
CEP128
POLR2C
SNAP47
JMJD4
CYRIB
CADM3
HMGB1
HROB
MXD1
TTC14
CYP19A1
GLDN
HJURP
MTIF2
JUND
IQCN
ZKSCAN4
NKAPL
KLHDC4
EPHA3
TMEM248
CRBN
ASMTL
GATAD2A
ANKRD12
ZNF680
H4C8
CCDC86
TTC27
SUMF1
DSTYK
TM9SF1
IPO4
SEBOX
TMEM199
POLDIP2
YPEL2
PTPN21
U2SURP
STK10
EFCAB9
EEF1AKMT3
ZMPSTE24
TMCO2
CDK1
TSFM
KNL1
MITD1
BDH1
TTPA
FAM161A
LAMP1
PSMF1
DUT
NOTCH2
ARMH4
SCFD2
LRRC59
ASNS
RBM42
LAMTOR3
HAUS5
TMEM262
ZFPL1
CDCA5
CPSF1
SLC39A4
MNAT1
SNX10
DNER
ASF1B
SLC25A51
ASB6
NSG2
CMTR1
TRIM2
ZNF316
HAGH
FAHD1
POLR1F
COG2
RUBCN
FYTTD1
PHACTR2
BLM
AGBL3
KCTD9
CDCA2
DCP1A
ZNF783
COX16
RAD54B
METTL18
C1orf112
ZNF296
GEMIN7
TFPT
PRPF31
FITM2
EMILIN1
KHK
UFD1
CDC45
VCPKMT
ZNF335
CDKN2C
FAF1
BICDL1
UBOX5
FASTKD5
RPS20
FAAP20
SVOP
NDUFA9
AKAP3
SGSM1
LARS2
TAF12
SLC39A7
RXRB
RING1
HSD17B8
RAB3C
TCOF1
ZNF92
CALM1
WDR11
RNF6
HPCA
NOTUM
P2RY1
MCM7
AP4M1
RBKS
BABAM2
COMMD4
SOD2
EIF2B3
WTAP
ZBTB40
FRG1
PCNA
TMEM230
CDCA8
C1orf109
DNA2
USP35
KCTD21
DARS2
CENPL
ZNF398
ZFP62
NAGK
ERLIN2
AMZ2
TEAD1
LSM5
AVL9
SSBP2
HIBADH
OTUD7B
DDX19A
NET1
TUBAL3
SMN2
SMN1
ZMAT3
ZC3HC1
TIMM22
GOT2
FAM133B
ZNF3
COPS6
MRPS33
AGL
RAD54L2
RABL2B
DEPDC1B
JMJD1C
ZER1
ZNF234
SCRT2
ATR
CLTC
COX10
FIGNL1
ZKSCAN8
P2RX5
PSMD9
HPD
MAD1L1
NUDT1
MRM2
LIN9
CHERP
COA6
MIGA1
JADE1
PXK
PCDHB1
LRRC73
YIPF3
POLR1C
NUDCD3
NFE2L2
RRP1B
HSF2BP
ZSCAN30
STAT3
QSOX2
ADCK1
RPGR
LARP1
TVP23B
SHQ1
FAM53C
CDC25C
TPRN
TMEM203
NDOR1
DPY19L4
PRPF18
MAGOH
PLEKHM3
TSEN15
MAK16
PPIL4
KIF14
CHMP1B
CAST
SNX18
MLLT1
HRK
IPO11
DIMT1
KLHL12
SH3GL1
CHAF1A
TOMM6
PRICKLE4
FRS3
DCP1B
DDHD2
FGFBP3
KIF2C
DHX40
MIA3
DPY19L1
CRKL
FOXJ3
PSMB2
SRPRB
USPL1
H4C2
CHD1L
H2AC4
H3C2
H4C1
H3C1
H1-1
CAMSAP2
EDARADD
UBE2C
C6orf89
NAA20
SESN1
CEP57L1
SEC23A
ATE1
URB1
CDK5RAP1
SLC25A16
NAPA
RPS7
UHMK1
ADGRG6
DIAPH3
SNRPD1
NUP107
RAD9A
PPP1CA
P4HA1
PEX12
AP2B1
ZCCHC4
ANTXR1
KANK4
HNRNPA1L2
PDLIM7
ANGPTL4
TMEM222
C18orf21
FAM98A
VPS72
PIP5K1A
PLXNA1
OLFML2B
MRPS15
SMC6
GEN1
TMTC1
CFAP100
MMUT
CENPQ
LENEP
SRF
NUDCD2
HMMR
CUL9
ZNF185
ZBTB7B
YARS1
S100PBP
TAF10
RRP8
ILK
RPS19
CCDC97
DDX1
PTPRH
ITGB3
NKAP
LCN8
LCN15
LCN6
TMEM132B
CDKN1A
ZNF724
MAN1A2
TSN
WDR70
NUP155
EXOC2
KANSL3
FER1L5
PARP1
ZWINT
CYP2W1
SPIRE2
GPAT4
TMEM210
LRRC26
MND1
RIOK1
CAGE1
WDR55
DND1
CCNL1
TXNDC9
EIF5B
C20orf204
TRUB2
COQ4
SURF6
ZNF131
TOR1AIP2
TOR1AIP1
MFSD14A
HCN3
CLK2
PIP5K1B
LIN28A
SLC35F5
FH
EDC4
ZSCAN9
SLC25A53
FAM199X
SMAD5
AEBP2
NPM1
CCDC77
KDM5A
POU5F1
TCF19
CCHCR1
UCHL5
RO60
SCAND1
GRPEL2
GATB
OGDH
CWC25
ZMAT2
HARS2
HARS1
RCOR3
C3orf33
NRN1
CENPB
CDC25B
MCCC1
TONSL
GARS1
TRIB3
ITGAV
PGPEP1
DCDC2
KAAG1
FAM169A
DNAH7
TOP3A
SMCR8
GOLGA7
DNAJC1
RAPGEF1
CASC3
TEFM
ZNF830
CCT6B
GET3
ACOX3
TRIM37
CLSPN
ZC3H18
PHTF1
GTF2B
ZNHIT2
FAU
NADK2
TM7SF2
STX11
DYRK4
RTN4RL1
DPH1
TROAP
CCDC150
RNF223
TEX15
EBAG9
FBXO48
APLF
NPHP1
MTLN
NQO2
GJA10
TDG
C12orf73
UTP15
ANKRA2
POLR3F
DZANK1
KLHL7
GCLM
POMZP3
CHCHD3
TRIM52
VPS37D
ZCCHC14
LHFPL5
CLPS
TLR5
RFC3