ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089498 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◣ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
BCAS3
HEATR6
NPAS4
TRIM37
PFDN4
HTR5A
TUBD1
RPS6KB1
BRIP1
DYNLRB2
TEX14
RAD51C
SLC12A9
KPNA2
CA4
ARFGEF2
APPBP2
TTC24
IQGAP3
USP32
BMP7
RNFT1
RFC3
FBXO32
POLR2J3
SIKE1
SKA3
MRPL57
ALKBH2
UNG
TSR3
GNPTG
SCRT1
DGAT1
ITPRIPL1
NCAPH
BCAS4
BARHL1
DCLRE1B
AP4B1
C12orf66
HIPK1
FANCD2
PPM1D
DZIP3
CIP2A
NCOA3
UTP20
MAD1L1
NUDT1
MRM2
IQSEC3
TRIP13
BRD9
OAZ3
MRPL9
DSCC1
ATXN7
PPM1E
RABL2A
SLC37A1
RSPH1
L1CAM
SRGAP2C
FAM72B
SGO1
KCNH6
RRP15
XKR7
PARD6B
BCAS1
KCNJ14
GRWD1
FAM72C
CREBRF
ZNF217
POLQ
POLR3GL
ANKRD34A
LIX1L
SUMF1
ZNF331
SRGAP2B
FAM72D
RNF166
CTU2
SMG8
NEIL3
DHX40
C3orf14
CSTF1
AURKA
XRCC2
C16orf46
YPEL2
CKAP2L
ATXN1L
SAP30BP
RECQL5
MTFR2
TMEM262
ZFPL1
CDCA5
SMC2
CCNB1
CYB561D1
ATXN7L2
CPLX2
ESPL1
CCDC86
KIF14
TTF2
UBE2C
SKA2
PRR11
RAD54B
NET1
TUBAL3
NOL8
CENPP
BIRC5
CRBN
INKA2
DDX20
HSF1
BOP1
SPATA25
NEURL2
CTSA
ZSWIM1
RACGAP1
TROAP
WIPI1
MCM7
AP4M1
WASHC5
NSMCE2
PRCP
DDIAS
EEF1AKMT3
METTL1
CYP27B1
FANCI
ZNF696
RAB22A
SMIM41
ATG101
RNF40
CCDC189
NTAQ1
INTS2
LZTFL1
CDC14B
UBE3D
DOP1A
ATG14
TRIM33
COG7
EDC3
BUB1
RMDN1
CPNE3
NOL6
TMEM249
SLC52A2
FBXL6
NUF2
RRP12
CCT2
TTLL11
GFPT1
TRMT61A
CKB
GFOD2
TTC27
HSDL1
DNAAF1
MCM10
ATP5F1E
PRELID3B
NEMP1
BICDL1
CEP128
PGBD5
SRGAP2
FAM72A
MFSD1
TTK
METTL2A
FOXH1
PPP1R16A
NAGPA
TONSL
MOK
MYBL2
C8orf33
TOP1MT
EXO1
URB1
AP3B2
PIGU
MAPK8IP2
INSM2
CENPBD1
AP4E1
TICRR
ZAR1L
BRCA2
GTPBP4
CCNA2
MED20
BYSL
TBX2
NRAS
TM9SF1
IPO4
NUP107
DUX4
RABL2B
GTF2H3
EIF2B1
DYNC2I1
KIFC1
ACOX3
RAD9A
PPP1CA
RRM2
NME1-NME2
NME1
NHP2
LTV1
MIS18A
SPEF2
TMEM208
LRRC29
DHX37
BRI3BP
LZTS2
TWNK
MRPL43
POLR2K
SPAG1
FBXO43
TMOD3
DNAH7
PHTF1
NOMO3
NOMO2
ABCC6
ABCA5
SMYD5
ZHX1-C8orf76
ZHX1
RHEBL1
KMT2D
ACBD7
RPP38
KLHDC4
WDR43
STOML1
PML
NDUFAF6
CCNE2
IARS1
VRK1
QSOX2
RECQL4
LRRC14
LRRC24
MFSD3
CPSF1
SLC39A4
EEF1E1
ZC3H18
ZNF79
WDR4
MYL12A
MYL12B
SQLE
EIF2D
ZNF23
NDUFV1
FAM207A
THOC7
FAM227B
DTWD1
RTF2
NAA35
SPTLC1
POU5F1
TCF19
CCHCR1
ZMYND8
RPP40
DEPDC1B
VAPB
KIF20A
BRD8
DLGAP5
CEP55
TUBB3
MC1R
ASPM
SARS1
RAD18
METTL3
NKX1-1
ATP6V1C1
FRAT2
MON2
GTSE1
NPM1
SHCBP1
EIF3C
EIF3CL
KLHL36
ZFYVE1
PRPF18
RTKN2
HCFC2
GLT8D2
CORO7-PAM16
CORO7
DNAJA3
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
POC5
ZFAND2A
GGH
TACO1
RRP1
PSMD4
CENPB
CDC25B
MRPS23
RNF114
SNRPE
ZHX3
FEZ2
AEN
TBC1D30
NUB1
GNS
C11orf49
PRMT6
MED6
TTC26
FAM214A
OS9
BLM
TOP1
PLEKHM3
ERN1
DCAF4
PCOTH
MIPEP
C1QTNF9B
FBXO5
CCNG2
ZNF688
CMC2
CENPN
DBNDD2
RFC1
PLK4
ENTPD5
BBOF1
PLCG1
TMEM186
PMM2
PUF60
MARS2
SPC25
AMIGO1
AARS2
BCAS2
HEXA
MCRS1
SLC35B1
WDR47
TCTN2
NOMO1
LOC101928764
FBXW8
CLTC
EIF2S1
ATP6V1D
SMIM5
RAD51
MOCS3
DPM1
RXYLT1
HEATR5A
DENND2C
AOPEP
ATP5MG
TDRKH
NEK11
ASTE1
TMEM231
GABARAPL2
TBC1D13
FANCC
URM1
ETFDH
C4orf46
WDR59
ARMC2
AHNAK2
CLBA1
PSMA5
SECISBP2
CKS2
PRR5L
COMMD9
ZBTB9
PARPBP
NUP37
CIT
CFAP69
IFT22
PLK1
KIAA0895L
EXOC3L1
E2F4
ELMO3
DDX11
VAC14
CCT5
ATPSCKMT
DPY19L4
IFT88
VPS13B
PSMB7
NIPSNAP3A
ATXN3
CDC25A
PRMT2
AP5Z1
VANGL1
WDR3
GDAP2
PRKAB1
EIF3E
CCDC150
DUS4L-BCAP29
DUS4L
COG5
SH3BGR
LCA5L
RMI2
MARCHF10
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
IPO11
DIMT1
NPIPB15
ANGEL1
MTMR14
ANAPC7
ZNF367
RRM2B
CHCHD3
ROPN1L
ATP6V0D1
AGRP
YWHAG
XPO4
ACTR6
FIS1
CLDN15
TMEM183A
SGO2
PTRHD1
CENPO
TRMT1
NACC1
KAT2B
HGH1
MROH1
FAM240C
PIP4K2C
TUFT1
FARSB
AXDND1
TEDC2
COX6A1
TRIAP1
GATB
CFDP1
GALK1
AUH
SPNS1
LAT
PUS1
SEC22A
RIPOR3
C16orf71
ANKS3
AGFG2
NOTCH2NLB
CYB561
GRB2
QTRT1
STAT1
CORO1A
MRPL27
EME1
DUS2
DPEP2NB
DDX28
NBPF1
ZNF408
ARHGAP1
NBPF11
L2HGDH
DMAC2L
ATAD2
VARS1
ASF1B
C1orf54
APH1A
ATG7
ATP1A1
SPRYD3
HMGB1
RNASEH1
WDHD1
SOCS4
SAXO2
EFL1
DYRK1B
TMEM67
SNAP25
UGGT1
RIOK1
CAGE1
TSEN2
METTL2B
WDR35
TAF13
ZNF530
CHD1L
PRKAB2
TPRA1
MCM2
HMGCS1
USP8
PHLPP2
PTPN1
STYXL1
MELK
PSMC2
DNAJC2
TMEM109
PRPF19
MBTPS1
ZNF622
RPL7A
MED22
SURF2
SURF1
VPS50
HEPACAM2
INIP
USP54
RBM28
SPATA33
CLCC1
CDIPT
TEX10
SENP5
RPS29
LRR1
WASHC2A
FCF1
AREL1
DCAF7
HELZ
KLHL20
CENPA
TPTE
CENPW
GOLGA5
CSRNP2
GOLGA3
RABIF
ZNF789
ATP5MF-PTCD1
ATP5MF
MET
DUSP15
TASP1
EXOC5
AP5M1
TRAPPC10
NUP35
TTLL5
ERG28
HEATR5B
GPATCH11
PRDX2
RNASEH2A
NGRN
TSFM
KDM5B
BBS1
FBXW2
COPS3
MDM4
NOTCH2
TBC1D31
INTS1
CSDE1
MED13
RCN2
REXO4
ADAMTS13
BSPRY
LSM14B
MND1
RPIA
MRPS21
RABEPK
LRPPRC
HASPIN
EBAG9
NXF1
STRIP1
TEKT2
ADPRS
SLC25A19
PSMD12
PRKAR1A
ZGPAT
ARFRP1
CDK1
C12orf45
RBM48
PEX1
VPS53
RGS14
LMAN2
RMDN3
GCHFR
RIOK3
NME2
NOL11
METTL6
EAF1
TRIM14
GREB1
SCFD2
MTRNR2L2
MSH3
DHFR
MRPL3
RTEL1
STMN3
RHNO1
FOXM1
ADCK1
LTO1
SAMD10
PRPF6
CRNKL1
CFAP61
NARS2
HAT1
KLF10
ATR
GLE1
MFSD5
DPH7
OSTM1
FSD1L
CUL2
SLC25A26
COMMD4
SPPL2A
VWA3B
RPLP0
GCN1
DYNC1I2
C14orf28
TFF1
PDXDC1
CYP51A1
MTPN
LUZP6
MAPKAP1
PREX1
CNPY3
RAE1
MTRNR2L3
PRPF39
CLCN7
CAMSAP2
CHRNA5
CCDC90B
TM2D3
MLYCD
IMP4
CCDC115
POLR2J2
FAM13B
TUT7
MXD4
RPL30
SLC22A5
PDSS1
LPIN1
ZNHIT1
PLOD3
NTSR2
SNRPD1
TAMM41
TEX2
WDR74
STX5
THADA
KLHL32
ADAT1
NDUFAF4
GNAI3
GPR61
NANS
KCTD13
SRD5A1
SDAD1
TRMT44
POLR2J
VPS45
SLC45A3
HM13
ZGLP1
FDX2
CCDC146
ASNS
RIF1
RPL32
GTPBP10
REXO5
ERI2
PEPD
DNAAF4
CHFR
GOLGA7B
RSL1D1
VPS9D1
UBXN11
MAPK8IP3
DNAJC25-GNG10
DNAJC25
PWP1
NOP9
DHRS1
POLD3
MACROD1
LTB4R2
WDR70
NUP155
RBSN
TMED9
B4GALT7
SPG7
NFATC2IP
WIPI2
GSC2
SH3GLB2
MIGA2
NEK10
PIP4P2
MYO5C
ZDHHC22
MARCHF8
WDR81
ZSCAN2
CCND3
PDPR
PRIM2
AMZ2
WDR77
ATP5PB
SPATA2
PTPRCAP
EMC8
COX4I1
TCP11L1
CABP4
CORO1B
GPR152
C6orf89
PES1
APRT
CDT1
TAF5
PWP2
LOC102724159
SAC3D1
ANKRD28
ABTB1
MAD2L1
DNA2
FAM180B
NDUFS3
KBTBD4
SNAPC4
UBFD1
EARS2
DDX19A
TTLL4
SFSWAP
PYCR3
GFUS
MAPKAPK5
AP1M1
FBXL13
ARMC10
PIMREG
AIPL1
NOTCH2NLA
PIF1
SV2A
SF3B4
MTMR11
GDPGP1
CIB1
GAR1
MYBL1
ARL6IP1
PMPCB
ANKRD46
TCOF1
RPS16
SUPT5H
BRD3OS
ZC3H3
TADA2B
CCDC96
SRPRB
RUVBL1
ANKRD42
GOSR2
POLL
DPCD
INTS4
SS18L1
PSMA7
PI4KB
SMARCD1
RAD54L
NUDT2
KIF24
LARP4
FAM186A
POLE3
C9orf43
ALAD
RAB7A
ORAI2
KIF18B
WWP2
NOB1
KXD1
PNPLA8
PRMT3
METTL18
C1orf112
MARS1
ARHGAP9
RNF115
POLR3C
RIDA
POP1
SF3B2
GAL3ST3
SETDB1
CS
HSPA5
NDUFB2
IFRD1
FANCE
TRIP6
SRRT
GSTO2
VPS33A
DIAPH3
MMUT
CENPQ
UTP23
ROM1
EML3
B3GAT3
NBN
S100A13
S100A1
CHTOP
XPO6
ZEB1
DYNLL2
PUM3
ZNF778
RGS20
ATP6V1H
INPP5K
CNTRL
C5
P2RY2
CYP27C1
ESCO2
KNOP1
IQCK
UTP4
DERPC
CHTF8
TMEM129
TACC3
SLBP
PUS7
RINT1
CFAP206
ZNF107
SWI5
GOLGA2
CDK5RAP2
SAR1A
SNX4
FAM174A
GPR89A
DDX46
LRFN4
DERL1
CANX
ECT2
KCNC1
PMS2
AIMP2
NUFIP1
GPALPP1
TF
ARFGAP1
TOPBP1
UCHL5
RO60
ETFRF1
CFAP94
RBM19
RANBP6
KIAA2026
SHOX2
KIF11
RSRC1
CREB3L2
FANCA
ARSG
LEO1
MAN2B2
RIPK2
SLC16A6
WASHC2C
NEK2
HJURP
CENPH
CENPE
NGDN
PTPRH
THAP10
LRRC49
MMS22L
C11orf24
PSMB4
GNG14
FBXW9
RRP36
MEA1
KLHDC3
MRPL21
IGHMBP2
ATG16L1
NAA25
KCTD5
NSDHL
CETN2
PALLD
ARHGEF35
XRN2
QTRT2
CCDC191
IFT46
ARCN1
DNAJC30