ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089500 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX20532172: hESC H1

◢ SRX20532173: hESC H1

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◣ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
TRIM37
PSMD6
TEX14
RAD51C
NPAS4
HEATR6
SLC12A9
BRIP1
USP32
CA4
TUBD1
RPS6KB1
PFDN4
HTR5A
BCAS4
BMP7
TTC24
IQGAP3
ARFGEF2
UBE2C
C12orf66
ITPRIPL1
NCAPH
MAD1L1
NUDT1
MRM2
NOL8
CENPP
SRGAP2C
FAM72B
SCRT1
DGAT1
SGO1
FANCI
RNFT1
NUF2
HSF1
BOP1
ALKBH2
UNG
FANCD2
SRGAP2
FAM72A
RFC3
DLGAP5
TRIP13
BRD9
KIF14
TROAP
RRP15
DZIP3
CIP2A
EEF1AKMT3
METTL1
CYP27B1
SKA3
MRPL57
ZNF217
FAM72C
SRGAP2B
FAM72D
DYNLRB2
DHX40
TTC27
TMEM262
ZFPL1
CDCA5
RNF166
CTU2
APPBP2
ZNF331
HSDL1
DNAAF1
C3orf14
PPM1D
C16orf46
EDC3
NTAQ1
KPNA2
RAB22A
MTFR2
BLM
IQSEC3
VRK1
WASHC5
NSMCE2
SIKE1
MCM10
SMC2
NEMP1
POLQ
TICRR
TRMT61A
CKB
CYB561D1
ATXN7L2
MOK
NET1
TUBAL3
CCNA2
CCT2
CYB561
NRAS
RAD54B
NEIL3
CPLX2
METTL3
DCLRE1B
AP4B1
CSTF1
AURKA
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
EIF2D
BIRC5
SKA2
PRR11
SGO2
SMYD5
RRM2
HIPK1
BARHL1
POLR3GL
ANKRD34A
LIX1L
KCNJ14
GRWD1
SUMF1
TOP1MT
UTP20
TSR3
GNPTG
NCAPG
INKA2
DDX20
VARS1
NDUFAF6
CCNE2
FBXO32
MAD2L1
C12orf45
BUB1B
TTK
CCNB1
OAZ3
MRPL9
TM9SF1
IPO4
ASPM
ZAR1L
BRCA2
ATXN7
BCAS1
TTF2
FBXO5
KCNH6
RAD18
SECISBP2
CKS2
PGBD5
PARD6B
TONSL
DSCC1
C16orf71
ANKS3
HMGB1
RRP1
SPTLC1
L1CAM
KIF20A
BRD8
ZGLP1
FDX2
STOML1
PML
WDR4
LTV1
NCOA3
SMIM5
PKMYT1
RTF2
TOP1
XRCC2
QSOX2
RECQL4
LRRC14
LRRC24
MFSD3
KLHDC4
SPC25
LOC101928764
MCRS1
PPM1E
HCFC2
GLT8D2
NBPF11
ASF1B
SAP30BP
RECQL5
CDK5RAP2
SMG8
INTS2
TBX2
TRMT61B
EIF3C
EIF3CL
AP3B2
POU5F1
TCF19
CCHCR1
CKAP2L
PRCP
DDIAS
PABPC1
METTL2A
SHCBP1
CDC14B
ELOVL1
CDC20
TEDC1
CRIP1
AP4E1
BUB1
DNAAF4
SHC1
FLAD1
CKS1B
NEK11
ASTE1
TEDC2
ACOX3
MOCS3
DPM1
KCTD13
EXO1
MRPS23
NHP2
FOXH1
PPP1R16A
MIS18A
SLC37A1
RSPH1
CDIPT
ZC3H3
TMEM186
PMM2
KIFC1
RBM19
CEP55
NKX1-1
THOC7
TTLL4
POLR2J3
RPP40
ATAD2
NUP107
NAGPA
DUS2
DPEP2NB
DDX28
RUVBL1
PREX1
CREBRF
PKIG
SERINC3
RCCD1
MTRNR2L2
MSH3
DHFR
HGH1
MROH1
NUDT2
KIF24
SCFD2
ATXN1L
RTKN2
FAM207A
SNRPE
TRIM33
DHODH
PKD1L3
GTPBP10
SNAP25
DUX4
FBXW8
KNOP1
IQCK
ATP6V1C1
GGH
BICDL1
POLR2J
PHTF1
SQLE
CDC25A
TADA3
ARPC4-TTLL3
ARPC4
PLK1
KLF10
UGGT1
AEN
CEP128
NUDT15
MYBL2
TEX10
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
TSEN2
DYNC2I1
CENPW
MRPS21
RABL2B
XKR7
MKI67
WASHC2A
ATP1A1
NOP16
HIGD2A
DMXL2
VPS33A
SLC35B1
SV2A
SF3B4
MTMR11
GTPBP4
ESPL1
NUB1
NOL11
WDHD1
SOCS4
DCAF7
RAD54L
PRMT6
KLHL36
ZMYND8
DHX37
BRI3BP
ATP5F1E
PRELID3B
NAA35
PTPN1
ZHX3
MND1
MRPL3
DPH7
CHUK
TF
TOPBP1
TPRA1
MCM2
RNF40
CCDC189
VAC14
RAD51
YPEL2
URB1
POC5
ZFYVE1
NOM1
RACGAP1
VAPB
GTF2H3
EIF2B1
PPP1R12B
UBE2T
FANCC
STAT1
PIGU
RHEBL1
KMT2D
METTL6
EAF1
UTP4
DERPC
CHTF8
ZBTB9
MRPL27
EME1
ZNF688
AOPEP
PES1
RPUSD1
CHTF18
ADCK1
CCDC86
TAF13
ZNF778
MAPK8IP2
FAM180B
NDUFS3
KBTBD4
TCOF1
CIT
RIPOR3
HEATR1
TSFM
ZSCAN2
OS9
PRKAR1A
LRWD1
ALKBH4
DENND2C
PLK4
BOLA2-SMG1P6
VPS50
HEPACAM2
RMDN1
CPNE3
NME1-NME2
NME1
VPS9D1
COMMD4
NPIPB15
NOTCH2NLC
LRPPRC
POFUT2
QTRT1
PLCG1
C1orf54
APH1A
EEF1E1
PTRHD1
CENPO
IDH3A
AGFG2
RHBDD2
CDK5RAP3
BICD2
WASHC2C
ZP3
GDI2
NDUFV1
CCDC150
PNPT1
PSRC1
IFT22
SPATA25
NEURL2
CTSA
ZSWIM1
SMIM41
ATG101
LRFN4
ANAPC7
DNAJC25-GNG10
DNAJC25
GTSE1
RABL2A
MPHOSPH6
TAMM41
POLR1B
MED20
BYSL
SLC45A3
CSRNP2
RXYLT1
TAF3
GNAI3
GPR61
BCAS2
UBE3D
DOP1A
RCE1
COG7
DUSP12
PXMP2
POLE
TMEM258
FEN1
ITGB4
FIS1
CLDN15
LZTS2
TWNK
MRPL43
PDXDC1
MTMR14
APRT
CDT1
CLCN7
PDF
NIP7
COG8
TMEM249
SLC52A2
FBXL6
RUNDC3B
HASPIN
TUBB3
MC1R
DUS4L-BCAP29
DUS4L
COG5
GFPT1
CDK1
COX6A1
TRIAP1
PARPBP
NUP37
CORO7-PAM16
CORO7
DNAJA3
SUV39H1
GPATCH4
NAXE
KIAA0895
ANLN
NOL10
CHFR
CRYL1
TTLL11
UTP23
MAF1
CYC1
POLR3F
DZANK1
CLCC1
MDM4
ABCA5
ZNF888
KLHL12
RBBP8NL
CCDC59
INIP
UBL7
NOMO3
NOMO2
DERL1
ABCC6
GNG14
FBXW9
MCM7
AP4M1
PWP1
TAF1C
ADAD2
GPSM2
CYP27C1
DYRK1B
CRBN
DBNDD2
RNF115
POLR3C
TATDN1
NDUFB9
RMND5B
PMS2
AIMP2
ASNS
ZFAND2A
HEATR5A
OSGIN2
MFSD1
PRMT2
TMED5
CCDC18
KATNIP
GTF3C1
SGTB
NLN
TMEM208
LRRC29
CCNB1IP1
GOLGA5
DDX11
C6orf89
PPIL1
TECPR1
H3C15
H3C14
H2AC19
H2AC18
H4C15
H4C14
DBNL
STX16
ARFGAP1
PRPF3
DDX49
COPE
IARS1
TPRN
TMEM203
NDOR1
TACO1
SYT5
NIPSNAP3A
INTS1
RAE1
MTRNR2L3
MDM1
WDR59
SPIRE2
NEK2
DCAF4
PUS1
CENPE
DNAL1
SKA1
ZHX1-C8orf76
ZHX1
PFDN5
MYG1
RIPK2
NBPF1
CCT5
ATPSCKMT
ZNF367
LYSMD2
RHNO1
FOXM1
MRPL2
KLC4
CUL7
OXR1
TRUB2
COQ4
TRMT5
SLC38A6
ZNF771
ACBD7
RPP38
PIF1
RELA
TPTE
NOL6
ATR
PSMC5
FTSJ3
MXD4
CEP112
CDK7
CEP135
FAM214A
CRELD1
INSM2
NARS2
RABEPK
TIMM9
KIAA0586
PRICKLE2
EBNA1BP2
CFAP57
RDH5
ITGA7
BLOC1S1
TAF4B
ALG8
RPL7A
MED22
SURF2
SURF1
SPNS1
LAT
C8orf33
RITA1
DDX54
C20orf27
RABIF
HAUS7
CNPY2
MACROD1
THAP11
PIAS3
ANKRD35
TBC1D30
GNS
KIF11
SMC6
GEN1
MMS22L
CEP72
NME2
TMEM109
PRPF19
RBSN
COQ2
FAM200B
SCRN3
CIR1
CCNG2
CKAP5
ZNF358
MCOLN1
NOC4L
DDX51
DNAH7
POLE3
C9orf43
ALAD
MRPS14
SPPL2A
PTPRH
ZC3H8
NEK10
WDR43
MTHFD1L
CENPA
CNTRL
CFAP69
C5
RNASEH1
NUFIP1
GPALPP1
HAT1
GFOD2
NGDN
RMI2
ZDHHC24
ACTN3
FURIN
AP5Z1
RAD9A
PPP1CA
SHOX2
RSRC1
UTP18
MBTD1
VTI1B
ANKRD46
ZNF706
SPATA33
PRDX2
RNASEH2A
ATG7
SLF2
MFSD5
WIPI1
CCDC146
UBE2Q1
CHRNB2
SLC25A19
ADAR
FRAT1
INPP5K
NAA25
KIF18B
IPO11
DIMT1
WDR62
THAP8
NPM1
WIPI2
WDR74
STX5
CHD1L
AAAS
RNF114
PRKAB2
YIPF4
TCHP
EXOSC5
BCKDHA
PRKAB1
MYBL1
HPS3
CLPTM1L
SLC22A15
CLTC
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
PSMB4
SKIV2L
NELFE
RFWD3
TRMT1
NACC1
UTP25
KIF2C
ARMC2
POLR2K
FBXO43
PYCR3
GFUS
GPR89B
SPDL1
GFM1
CDCA8
C1orf109
MMUT
CENPQ
TCTN2
RSL1D1
ZC3HC1
ZNF622
MRPL22
GEMIN5
PMPCB
NAGK
NOTCH2NLA
FBXW2
TMEM250
LSM8
HRH3
LSM5
AVL9
YIF1A
TMEM151A
NOP9
DHRS1
SAXO2
EFL1
METTL18
C1orf112
LTB4R2
LOC112694756
MYL12A
ANGEL1
NOTCH2
MYL12B
SPEF2
PIP4P2
ZNF23
ZNF530
ZNF212
KRT3
ACTR6
GSN
RAB14
HJURP
MEFV
ATIC
USP14
XPOT
ZFP41
CMSS1
CCND3
YEATS4
POLL
DPCD
SZT2
MED8
RPL8
ECT2
ZNF34
TUFT1
MYO5C
BZW2
ANAPC1
ANKMY2
RPRD1A
MARS1
ARHGAP9
EXOC5
AP5M1
NOMO1
CALCOCO2
XRN2
WDR61
PPIL4
CKMT1A
DYNC1I2
OTUB1
SEC22A
PRSS22
CEP41
ESCO2
CMC2
CENPN
CENPH
PDPR
KIAA1586
RRP12
SLC35C2
ATG14
LPIN1
SEC22B
CNIH1
MAPK8IP1
NTSR2
KLHL18
KIF9
LTN1
CS
RRP1B
HSF2BP
CDK20
TC2N
FAM227B
DTWD1
ECSIT
CNN1
AMZ2
WDR25
WARS1
CDK4
TSPAN31
MARCHF9
AGAP2
SMPD4
MZT2B
PNO1
HMGB2
THAP5
DNAJB9
CREB3L2
GTF3C5
PTPRCAP
ZNF273
CLBA1
AHNAK2
CABP4
CORO1B
GPR152
TRMT6
MCM8
DDX31
GTF3C4
SRPRB
NOXO1
TBL3
RPS2
RNF151
GPR89A
LTO1
DPY19L4
EEF2K
CIART
HSPA9
CEP162
SYS1
MELK
SMG5
PDIA4
NBN
DNAAF2
AP1M1
SPG7
VHLL
GLMP
ZNF641
ZNF805
AURKC
SH3GLB2
MIGA2
THEM4
REXO4
ADAMTS13
ZC3H18
CFDP1
SPAG1
RECQL
GOLT1B
BLOC1S2
LOC389831
MAPK8IP3
P2RY2
RBM28
ZNF696
ZNF408
ARHGAP1
KLHL24
DUT
RAB41
PDZD11
KIF4A
NOTCH2NLB
FPGS
LLPH
EID2B
EID2
FANCA
SETDB1
STRIP1
AP5B1
OVOL1
NEDD4
ODF2
SHQ1
BRSK1
HSPBP1
TMEM231
GABARAPL2
RPLP0
GCN1
PDSS1
HEATR5B
GPATCH11
DEPDC1B
KNTC1
THAP10
LRRC49
WDR46
RGL2
PFDN6
SDAD1
TMEM167B
VCPKMT
SPOP
ING3