ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089499 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◣ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

NPAS4
HEATR6
PSMD6
BCAS3
DUX4
TUBD1
RPS6KB1
BRIP1
TEX14
RAD51C
PFDN4
TTC24
IQGAP3
HTR5A
TRIM37
SKA3
MRPL57
PARD6B
USP32
APPBP2
ATXN7
SLC12A9
SCRT1
DGAT1
PPM1D
DYNLRB2
ALKBH2
UNG
ARFGEF2
IQSEC3
FANCI
KPNA2
NCOA3
ZNF217
DCLRE1B
AP4B1
BCAS4
CPLX2
BARHL1
BMP7
SAP30BP
RECQL5
CA4
TRIP13
BRD9
C8orf33
EEF1AKMT3
METTL1
CYP27B1
VRK1
NKX1-1
RAD54B
HIPK1
HSDL1
DNAAF1
FAM72C
C12orf66
MCM10
MYBL2
TTLL11
C3orf14
TRIM33
XRCC2
CNOT3
SMG8
KIF14
POLQ
DHX40
TSR3
GNPTG
SPATA25
NEURL2
CTSA
ZSWIM1
TRMT61A
CKB
AP3B2
MAD1L1
NUDT1
MRM2
CSTF1
AURKA
HSF1
BOP1
XKR7
NOL8
CENPP
RNF166
CTU2
RFC3
FANCD2
SIKE1
BUB1
DUS2
DPEP2NB
DDX28
MTFR2
DZIP3
CIP2A
PGBD5
MOK
RRP15
SGO1
NAGPA
PHTF1
WDR4
SRGAP2B
FAM72D
TROAP
ITPRIPL1
NCAPH
L1CAM
KLF10
RRM2
EIF3C
EIF3CL
KAT2B
TONSL
RNFT1
MOCS3
DPM1
FAM214A
POLR3GL
ANKRD34A
LIX1L
SRGAP2C
FAM72B
CRBN
MAMDC2
FANK1
EXO1
WASHC5
NSMCE2
MED20
BYSL
SARS1
KCNH6
CCNA2
GTF2H3
EIF2B1
CDIPT
EXOC6
TBX2
POLR2J3
LOC101928764
ZHX3
CCT2
TMED10
TRPM7
FBXO5
TSEN2
SKA2
PRR11
ATP6V1C1
FOXH1
PPP1R16A
METTL2A
ZFYVE1
THOC7
DSCC1
NOTCH2
VARS1
CORO7-PAM16
CORO7
DNAJA3
TCTN1
INKA2
DDX20
AP4E1
RAB22A
BIRC5
TTK
EDC3
TBC1D30
GNS
TOP1MT
DYNC2I1
EIF2D
NEIL3
MRPS23
ADAT1
HSPA5
YPEL2
RTKN2
CCT5
ATPSCKMT
TMEM249
SLC52A2
FBXL6
NBPF11
TTF2
CHUK
LZTFL1
FBXO32
SGO2
SMIM41
ATG101
CEP128
RMDN1
CPNE3
RPL8
ZNF517
SUMF1
UBE2C
SFSWAP
SQLE
AZIN1
EEF1E1
RABL2B
SRPRB
ZC3H18
RCN2
IARS1
POLR2K
SPAG1
RRP12
ESPL1
INSM2
FAM180B
NDUFS3
KBTBD4
ZSCAN2
GABPB1
U2SURP
ATAD2
GABARAPL2
WASHC2C
MCM7
AP4M1
CREBRF
PPT1
POU5F1
TCF19
CCHCR1
USP14
ERN1
ZNF696
MYL12A
COQ2
MYL12B
RAE1
MTRNR2L3
TSFM
MTMR14
CKAP2L
ARMC2
UBE3D
DOP1A
OAZ3
MRPL9
POLR2J
CMC2
CENPN
UTP23
C1orf54
APH1A
STK36
RNF25
CNTRL
C5
UTP20
ART1
NEK11
ASTE1
DYRK1B
CLTC
QSOX2
NUB1
CCNB1
CDC14B
DCAF4
CYB561D1
GTF3C5
SNAP25
VANGL1
BSPRY
TTC27
WASHC2A
PTPRH
MAPK8IP2
GPR89A
PYCR3
GFUS
STOML1
PML
TSEN15
WDR43
MRPL44
RABL2A
TICRR
NBPF1
NDUFAF6
CCNE2
VAC14
TMEM262
ZFPL1
CDCA5
PPM1E
NME1-NME2
NME1
TM9SF1
IPO4
TRIP4
PCLAF
ZNF331
NET1
TUBAL3
MED13
NUF2
MAST1
RTBDN
GPR89B
IKBIP
APAF1
ZNF79
ROPN1L
ACOX3
REXO4
ADAMTS13
ASNS
STX16
TRMT44
RPS19
NAA25
UMPS
GET3
NAT10
NDUFB3
FAM126B
MYO5C
PPP1R12B
UBE2T
BICDL1
PRCP
DDIAS
PDXDC1
RXYLT1
WDR35
ATXN1L
RFX5
VPS33A
MTRNR2L2
MSH3
DHFR
ATP5F1E
KLHL24
PRKAR1A
PRELID3B
CENPBD1
SLCO4A1
BCAS1
AGFG2
C16orf71
ANKS3
PUS1
NEMP1
NUP107
SLC37A1
RSPH1
SPTLC1
DEPDC1B
TPTE
UGGT1
ATG14
TP53INP1
KIFC1
PLK4
RTEL1
STMN3
YIPF4
RAD51
PIGU
TACO1
FANCC
DHX37
BRI3BP
AEN
RACGAP1
NOTCH2NLC
GALK1
DECR1
COX6A1
TRIAP1
DDX42
CCDC47
RECQL4
LRRC14
LRRC24
LTO1
MFSD3
CDK5RAP3
SLC25A24
DHODH
PKD1L3
PUS7
RINT1
TOP1
INTS2
TFRC
ZDHHC17
MDM1
CFDP1
INIP
ZEB1
TUFT1
CHRNA5
PREX1
ESCO2
CEP55
VPS50
HEPACAM2
CENPH
RNF115
POLR3C
BLM
LTV1
DLGAP5
RBM48
PEX1
PSMD12
SPATA2
ATP1A1
RRP36
MEA1
KLHDC3
NHP2
MXD1
JMJD1C
PSMB7
COL23A1
C12orf45
TMEM120B
NBPF12
PTPRN2
BCAS2
MKI67
CNPY3
AOPEP
RRP1B
HSF2BP
TBK1
TMOD3
XPO4
ELOVL1
CDC20
GLRX5
SLC35B1
PDPR
DPY30
EIF3E
PSMD4
NOL6
SUPV3L1
DDX11
DNAH7
C20orf27
PKMYT1
MED6
CPLX1
MND1
USP39
C2orf68
CCDC77
RNF181
TMEM150A
KDM5A
RGS14
LMAN2
TBC1D15
POLR2J2
STRADA
ARRDC4
SRGAP2
FAM72A
KIAA0895L
EXOC3L1
E2F4
RNF114
ELMO3
ARHGEF5
MARCHF10
STAT1
KCNJ14
GRWD1
NUP54
LRPPRC
ANKRD46
ZNF706
CCNE1
ABL2
KIF20A
BRD8
SMC2
ZNF367
POLL
DPCD
WDR74
STX5
ATR
KLHDC4
NPM1
TSEN54
LLGL2
CASKIN2
RNF40
CCDC189
DDX21
ZGRF1
LARP7
MFSD1
NDUFV1
SLC25A19
FRAT1
ZSCAN25
ZNHIT1
PLOD3
TCP11L1
RMND5B
WWP1
CCDC88A
VCPKMT
NAA35
FANCE
TRIM25
METTL6
EAF1
SF3B3
COG4
TRAPPC10
WDR46
RGL2
PFDN6
TBC1D13
MDM4
ZNF622
LDLRAD3
RPL6
PTPN11
CMTR1
VPS13B
INCENP
CSRNP2
MMP24
MAP3K20
IPO11
DIMT1
TMEM208
LRRC29
SLC35A5
ATG3
ATG7
TEX10
ECT2
SLC13A3
TP53RK
MON2
URB1
POC5
PCOTH
MIPEP
C1QTNF9B
SEBOX
TMEM199
POLDIP2
DDX46
NOTCH2NLA
GFPT1
PIP4P2
SHCBP1
RPP40
WFDC3
DNTTIP1
SHOX2
RSRC1
NDUFAB1
BIRC6
KIAA1586
RPL36AL
MGAT2
PRDX6
CLPTM1L
CCDC86
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
HMGB1
PMS2
AIMP2
PLK1
SEL1L
HEATR5B
GPATCH11
HEATR5A
CHPF2
ABCF2
PRPF18
GPR107
GSTO2
FAM171B
UTP4
DERPC
CHTF8
DUS4L-BCAP29
DUS4L
COG5
RBBP5
TMEM109
PRPF19
ASCC3
FAM24A
CEP135
MRPL3
FBXW8
PTRHD1
CENPO
ZFAND2A
NME2
DNMT1
AJUBA
TEDC2
MXD4
BCKDK
KAT8
CAV2
RBM19
C6orf89
ZNF688
RAD18
RPS29
WWP2
NOB1
ZHX1-C8orf76
ZHX1
THBS3
MTX1
NOMO2
CENPA
SPPL2A
LRR1
ASL
GLE1
CPSF1
SLC39A4
NOTCH2NLB
VAPB
PLCG1
GTSE1
ZNF778
BBS5
COMMD4
NOP9
DHRS1
UBE3B
PDCD6
MELK
IST1
SLC7A6OS
PRMT7
TADA3
ARPC4-TTLL3
ARPC4
LTB4R2
WDR3
GDAP2
THAP5
DNAJB9
PRDX2
IFT88
RNASEH2A
NGDN
SPICE1
ANKRD40
AMMECR1L
SUSD6
KDM5B
ZNF23
NOXO1
TBL3
RPS2
RNF151
ANGEL1
FIGNL1
EEF2KMT
LSM8
SLC25A44
FSD1L
AUH
CCNG2
C16orf46
PPP2R3B
PFDN5
MYG1
UBE2G2
BCL7B
TMED9
B4GALT7
PROX2
CTNNAL1
SH3GLB2
PAM16
MIGA2
LRWD1
ALKBH4
PSMC6
COG7
NAGK
RUVBL1
TMEM67
GOLIM4
DSE
AHNAK2
CLBA1
CD2BP2
TSPYL4
DDX19A
RRP1
YIF1A
TMEM151A
EIF2S1
ATP6V1D
CCDC150
USP15
PDE4DIP
SENP5
SMIM5
NXF1
MRNIP
SAXO2
EFL1
ZNF3
COPS6
PLEKHM3
STMN1
PCNX3
MAP3K11
TATDN2
KIF21A
TOMM22
FAM174A
NPIPB15
WDR53
FBXO45
FBXW2
GFOD2
SEC22B
ZC3HC1
DNAAF4
TEFM
ZC3H3
DCAF7
UNK
H3-3B
MRPL36
NDUFS6
RHEB
BSN
DAP
ZMYND8
FZD6
TADA2B
CCDC96
RANBP6
KIAA2026
CCDC59
DPY19L4
NOMO3
PDCD11
ATP5MD
ABCC6
RPL14
MESD
FAHD2A
STRIP1
PRMT6
SLC27A2
NSG2
NTAQ1
ADPGK
SH3BGR
LCA5L
MAX
MYBL1
COPS3
COMMD2
PI4KB
SECISBP2
CKS2
CDK1
DBNDD2
POLE3
C9orf43
ALAD
EIF1AD
CST6
BANF1
NCBP2AS2
NCBP2
PGS1
TM2D3
PCMTD1
DENND2C
CENPW
PPRC1
RPSA
NOC3L
MRPL2
KLC4
CUL7
NIPSNAP3A
TUT7
MLYCD
RASAL2
SUN3
C7orf57
TAF4B
APRT
CDT1
NOL11
XPC
LSM3
TCTEX1D2
OTULIN
PEBP1
CALU
CEP350
NRAS
STYXL1
RHNO1
FOXM1
CPEB4
SPC25
TMEM167B
CENPB
CDC25B
TTLL5
ERG28
NDUFB2
LMNA
DGKZ
SLC29A2
MEX3A
MIS18A
DNAJC25-GNG10
DNAJC25
RBM28
TTLL4
PGD
FAM117B
RIDA
POP1
SH2D3C
CDK9
NUDT2
KIF24
FAM227B
DTWD1
FKBP3
FANCM
SPATA33
TIGD5
EEF1D
RRM2B
HSP90AA1
TARBP2
MAP3K12
PITX3
GBF1
UQCRC2
WDR20
VKORC1L1
STXBP3
CDC42BPG
GOLGA6L3
KIF18B
UFD1
CDC45
E2F8
ELP1
ABITRAM
PTPN1
DERL1
TMEM258
FEN1
EMC9
RPL7A
MED22
SURF2
SURF1
BZW1
RNF31
PSME2
MLLT11
CSDE1
BCKDHB
CDC42SE1
FRG2
GDAP1
NOM1
ADCK1
DHX16
ZNF473
VRK3
TMEM183A
LSS
HGH1
MFSD5
ZNF680
SLC25A36
MROH1
SLC39A9
ERH
RHEBL1
THOC3
PCNA
KMT2D
TMEM230
CDS2
RAD51AP1
C12orf4
HJURP
LRRC47
ZNF148
CACYBP
USP10
PDPK1
CEMP1
ZNF641
CALB1
NTNG1
RNASEH1
POLR3F
DZANK1
DNA2
CIT
PIAS3
DNAJC21
DYNC1H1
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
SPNS1
LAT
HCFC2
GLT8D2
SRD5A1
SYS1
GPN1
CCDC121
FAM161B
COQ6
PFDN2
NIT1
NUP160
ZBTB26
RABGAP1
KMT5A
DYNLL2
GKAP1
ADAMTSL4
SNRPE
UBE2Q1
CHRNB2
RHBDD2
SLC25A16
VCP
FANCG
GPATCH1
CFAP54
BAZ1B
TAF1C
ADAD2
ZFAND3
ZNF410
GLRX2
PITPNC1
STK3
ITGB4
KLHL18
KIF9
SKIV2L
NELFE
PPIL1
UNKL
MCCC1
ZNF789
ATP5MF-PTCD1
ATP5MF
SPATA17
GPATCH2
MRPL28
PRTG
NBPF6
SLC35B2
HSP90AB1
SSNA1