ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089501 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX20532172: hESC H1

◢ SRX20532173: hESC H1

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◣ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

DUX4
PTPRN2
CNOT3
EPN1
MAMDC2
FRG2
COL23A1
FRG2C
OPRL1
RGS19
LKAAEAR1
SMG8
C8orf33
PMF1-BGLAP
PMF1
FBXO5
NGB
SCRT1
DGAT1
RBM48
PEX1
CRBN
MUC3A
BCAS3
SAP30BP
RECQL5
PSMD6
TROAP
ATG14
HEATR6
UCKL1
TUBD1
RPS6KB1
TTC24
IQGAP3
SLC12A9
CREBRF
RACGAP1
HTR5A
BRIP1
LGR6
XKR7
NPAS4
DSCC1
NGDN
PARD6B
NCOA3
TRIM37
DRD4
TSR3
GNPTG
NDUFAF6
CCNE2
VRK1
SKA3
MRPL57
ZNF217
EEF1AKMT3
METTL1
CYP27B1
USP32
CRNKL1
CFAP61
PPM1D
TTF2
PFDN4
APPBP2
ART1
CSTF1
AURKA
NAGPA
TPTE
COX10
TMEM271
DYNLRB2
ATXN7
RPEL1
SUMF1
C12orf66
TMEM208
LRRC29
RRM2
CFDP1
SFSWAP
OAZ3
MRPL9
NKX1-1
TCTN2
TRIM33
VAC14
FBXO32
FAM240C
GET3
RGS14
LMAN2
ARFGEF2
ZNF585B
ZNF383
BCAS4
GATB
NTAQ1
LZTFL1
TEX14
RAD51C
EEF1E1
NET1
TUBAL3
TRIP13
BRD9
UTP20
NUF2
MTFR2
QTRT1
MTRNR2L1
SGO1
TRMT1
NACC1
CCNG2
CCNA2
FANCD2
BIRC5
ITPRIPL1
NCAPH
RRP15
UTP25
SCFD2
SMYD5
CCDC86
WDR4
RRP12
ALKBH2
UNG
STAT1
RABL2B
CCNB1
FAM72C
C16orf71
ANKS3
WASHC2C
RAD51
EXO1
TMEM262
NME1-NME2
NME1
CCT2
AURKB
ZFPL1
CDCA5
KIF18B
URB1
RBM19
CDC25A
TM9SF1
IPO4
KCNJ14
GRWD1
DZIP3
CIP2A
CKAP2L
KIF20A
BRD8
VPS33A
SRGAP2B
FAM72D
CCNB2
GNG14
TTC27
SRGAP2C
FAM72B
SRGAP2
FAM72A
FBXW9
POLR2J3
KLHL18
KIF9
DHX37
BRI3BP
NEIL3
LTV1
WDR74
STX5
SLX1B
SLX1A
BOLA2B
BLM
WASHC2A
SHC1
BOLA2
MCM7
AP4M1
CDK7
SULT1A4
SULT1A3
PSME3
BECN1
FANCI
RIPPLY2
CYB5R4
ESCO2
NEK2
FLAD1
CKS1B
NUP214
MOK
MTRNR2L2
MSH3
DHFR
SHCBP1
MAD2L1
SPTAN1
XRCC2
HEXA
NOL6
BOLA2-SMG1P6
EDC3
RAD54L
TTK
NOL8
CENPP
SKA1
C16orf46
RTN4RL1
DPH1
ACOX3
EBNA1BP2
CFAP57
GTF2H3
EIF2B1
CORO1A
TRMT6
MCM8
RABL2A
KPNA2
TICRR
CEP135
GPATCH4
NAXE
PPAN-P2RY11
PPAN
ANGPTL6
TMEM186
PMM2
NAT10
UNC45B
NLE1
SPNS1
LAT
P2RY11
MIS18A
VARS1
BUB1B
EXOSC5
BCKDHA
IPO11
DIMT1
NBPF1
KIF15
KIAA1143
MRPL27
EME1
ZMPSTE24
FAM161A
TBRG4
DYNC2I1
IQSEC3
SPATA25
SECISBP2
CKS2
NEURL2
CTSA
KIF2C
ACTR6
ATP6V0D1
AGRP
WASHC5
NSMCE2
RNF166
CTU2
DCAF4
MTRNR2L8
POLQ
TRIP4
PCLAF
DDX31
GTF3C4
ZSWIM1
SMC2
TRUB2
COQ4
NUDT15
TMEM248
KIAA0895
RNF40
CCDC189
PIGU
USP2
POLR1B
KNOP1
IQCK
SPCS1
GLT8D1
TRMT61A
CKB
DLGAP5
HMGB1
CYB561D1
ANLN
PBK
ELOVL1
CDC20
NUDT2
KIF24
NOL7
UFD1
CDC45
CENPW
LYRM4
FARS2
UBXN11
VTA1
NMBR
HCFC2
GLT8D2
SUPV3L1
HEATR1
PMS2
AIMP2
PRR5L
UBFD1
EARS2
WDR46
RGL2
PFDN6
MCM10
HAGH
FAHD1
CPLX2
NOP16
HIGD2A
POU2F1
POLR3D
PRCP
DDIAS
KIF23
TMCO2
GPN2
TAF13
COMMD9
PLK4
GBA
GPATCH3
DYRK1B
CDK1
DNAJC25-GNG10
DNAJC25
DNASE2
KLF1
GCDH
PUM3
PNO1
DUS2
DPEP2NB
DDX28
SGO2
KIFC1
URB2
TAF5L
DPH2
B4GALT2
ATP6V0B
POC5
CDC6
SLC35B2
DHX40
KCTD9
CDCA2
RDH5
RPP40
MDN1
SNRPE
ASPM
ZNF778
ATR
ODF2
TFB2M
CNST
TDRD7
UBE2C
DDX49
COPE
GTSE1
WFDC3
DNTTIP1
HSP90AB1
H3C15
H3C14
H2AC19
H2AC18
H4C15
H4C14
SHQ1
PCOTH
MIPEP
C1QTNF9B
TTC26
MAST1
DDX11
LMLN2
COX6A1
ULK4
TADA2B
CCDC96
RTBDN
DDX19A
PNPT1
ITGA7
BLOC1S1
DDX21
SSBP1
ADHFE1
EIF3C
RNASEH1
MYBL2
TRIAP1
TSFM
RRS1
ZNF497
A1BG
DUSP15
UTP4
DERPC
CHTF8
LOC102724770
DGCR6
MRTO4
EMC1
SNX16
IREB2
EIF3CL
ZNF358
HM13
IMP4
CCDC115
UGGT1
COG7
SLC25A26
INTS7
DTL
PUS1
SASS6
MCOLN1
GFM1
LSM12
G6PC3
EIF2D
MAK16
NOL10
RBM28
SRPRB
CASP8AP2
C6orf89
PBRM1
GNL3
ZNF331
LAMP1
CENPS-CORT
CENPS
TDG
C12orf73
PGBD5
UTP15
ANKRA2
BUB1
TRMT61B
TRIP12
FBXO36
MND1
LSM5
AVL9
WIPI1
RNF187
ARMC2
LOC101928764
PWP1
MRM3
GLOD4
KNL1
MFSD1
RTTN
KAT2B
PPP2R3B
TTLL11
WDR62
THAP8
CEP55
FAM227B
DTWD1
TFIP11
BRCA1
ZGRF1
LARP7
TRAPPC6A
BLOC1S3
ZFYVE1
PPRC1
THOC3
DIAPH3
KDM5B
TRMO
PCNA
PPIL2
NAGK
ZNF688
LZTS2
CEP43
PINX1
ENDOV
PAXBP1
RBKS
FBXL13
BABAM2
ARMC10
NEMP1
KLHDC4
RHEBL1
DCLRE1B
AP4B1
MARCHF8
LIN28A
C5orf51
IARS1
TWNK
MRPL43
DYNLL1
FAM53C
DBNL
CDC25C
PRMT2
CHCHD1
TSEN54
NPM1
ZGLP1
THADA
FDX2
CFAP298-TCP10L
CFAP298
DHODH
LLGL2
PKD1L3
MAPK8IP2
SYNJ1
ITGB3BP
EFCAB7
ATAD2
CASKIN2
MRPL3
SNRPD1
GSN
ANAPC10
ABCE1
XRN2
RAD18
INSM2
HSPA9
FARSB
DHRS11
RCL1
TMEM230
RTEL1
MRPS23
PRMT1
MRPS35
COMMD4
BBS5
FZR1
QTRT2
CCDC191
KMT2D
YARS1
S100PBP
DOHH
OGDH
ASF1B
DDX42
CCDC47
ZNF593
C1orf232
OIP5
NUSAP1
DUS3L
MRM1
BARHL1
SETD4
ECSIT
CBR1
STIL
CNN1
IFT46
ARCN1
RUVBL1
IFT57
AEN
LTN1
GTPBP4
LRRC59
KCNIP2
CFAP410
NOC4L
DDX51
CDCA8
C1orf109
ZBTB9
L1CAM
PRR22
CLSPN
E2F3
WDR36
INO80
PSMD9
HPD
CASC3
HMGB2
CCDC146
RRP1
ZAR1L
BRCA2
RAB14
AP5Z1
TOMM40
NDUFS7
MARS2
NCAPG
TMEM242
UBE2Q1
CHRNB2
SLC25A51
SECISBP2L
VPS50
HEPACAM2
BRSK1
STMN3
CDS2
CBWD5
HSPBP1
MVK
TEKT2
ADPRS
USP39
C2orf68
POLR3F
DZANK1
FAM200B
SUGP2
ARMC6
HSDL1
DNAAF1
RPUSD4
FAM118B
MKI67
NRAS
USP30
UBA52
RIOK1
CAGE1
ATP6V1C1
MMUT
CENPQ
CDC37
RFC3
AXDND1
CCDC116
NRL
GNL2
TTLL4
ESPL1
PISD
STK11IP
RTF2
RNASEH2C
KAT5
CWC25
FBXW8
NCLN
SEBOX
CNKSR1
RAD9A
GTPBP6
ZSWIM8
TMEM129
TACC3
SLBP
CMC2
CENPN
ZBTB17
ZWILCH
SNAPC5
RPL4
MPHOSPH10
MCEE
TAF4B
LARP4
FAM186A
CCDC77
NUP107
SLC37A1
PPIH
AGFG2
STYXL1
RAD51AP1
C12orf4
SRA1
HIPK1
TSEN2
PDE8A
GMNN
RHNO1
FOXM1
UTP23
RPIA
PARPBP
NUP37
MRPL4
CAMTA1
DNA2
S1PR4
TMEM199
POLDIP2
TFPT
PRPF31
PRKAR1B
CENPM
PPP1CA
RPSA
SKIV2L
NELFE
GTPBP10
PHB2
PIP4P1
TOMM22
UBN2
POMZP3
SLC35A4
APBB3
TMEM231
POLR2K
SLC39A6
MED20
BYSL
TIPARP
TSN
YIF1A
TMEM151A
CPEB4
ARID3B
GAR1
KLHL32
RNMT
FAM210A
PDXDC1
DNAH7
ABCF1
SAR1B
STX18
WDR43
ZSWIM9
LIG1
LRRC73
LARS2
GLRX5
RNF181
DHX33
LAP3
SSNA1
ANAPC2
RRP36
MEA1
KLHDC3
REXO4
ADAMTS13
TMEM150A
TIMELESS
MIP
STAM2
PPT1
CBWD3
RPS29
OSGEP
APEX1
ADAT1
MTR
WDR61
C12orf45
TOR1A
SOD2
SDAD1
FAM174A
INKA2
SEC14L1
PACRGL
NUP35
WWP2
NOB1
PPIL1
OXNAD1
DPH3
SLF2
ZNF23
UNKL
CELSR3
ZBTB49
LYAR
SLC25A1
XPO5
POLH
ITFG2
RGS20
CFAP299
ZC3H18
ADPGK
FKBP1A
DHDDS
AP3D1
FAM187A
EFTUD2
CCDC103
DDX20
ZNF202
SLC35C2
LSG1
IQCH
AAGAB
ADK
ATXN7L2
SRD5A1
NOXO1
YIPF3
POLR1C
ANKRD42
DBNDD2
GDAP1
SKA2
PRR11
VPS35
POLR1F
RSPH1
SPC25
ZNF529
CLTC
FKBP3
FANCM
GGNBP2
IQCG
SPG21
TXLNA
ASNS
DCAF11
KIF14
PALB2
DCTN5
EIF4H
REXO5
ERI2
ATP6V1H
TRMT5
SLC38A6
PLK1
TTC7A
MCFD2
E2F8
ARHGAP11A-SCG5
ARHGAP11A
SPAG1
DDX18
SF3A3
PARG
RANBP6
KIAA2026
SPATC1L
TMED5
CCDC18
CNPY3
MAP3K7
DPP8
WDHD1
SOCS4
SARS1
OXSM
NGLY1
CNOT4
PTRHD1
CENPO
C6orf47
PC
METTL3
NEU1
MAD1L1
SHOX2
TMEM167B
PLEC
FAM180B
HASPIN
GPD1
COX14
MRPS18B
ATAT1
TRIT1
PEPD
LAMTOR5
TBL3
RPS2
RNF151
NOLC1
SPRYD4
DBF4B
SPTLC1
QSOX2
RPL6
PTPN11
KDM5A
CARS1
CSE1L
CRCP
SUPT7L
SLC4A1AP
NCL
WDR81
NUDT1
MRM2
CDK5RAP1
CENPF
CEP162
NDUFS3
KBTBD4
SCAMP4
ADAT3
MYO19
RPF2
MON1A
KIAA0895L
ROM1
EML3
B3GAT3
PDE6D
COPS7B
WDR3
GDAP2
EIF2B3
HEATR3
LMLN
NPIPB15
LRP2BP
EBAG9
ERLIN2
ATP5F1E
ANKRD37
SMIM41
MRPS16
NUDCD3
RAD54B
PDF
NIP7
COG8
PUS7
KTI12
CDKN2C
POLE3
C9orf43
ALAD
EIF2S1
ATP6V1D
SLC25A32
DCAF13
GABARAPL2
UBE3D
DOP1A
FAF1
ING5
SLF1
KIAA0825
INTS12
GSTCD
STAT3
SAP30
CRLF3
ATAD5
HSPH1
NOM1
APOM
PABPC1
STX16
TTC23L
MOCS3
DPM1
TFAP4
KIF3B
UBIAD1
TAF10
PPIL4
RIOK3
GOLGA3