ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089507 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◣ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
HEATR6
TRIM37
TUBD1
RPS6KB1
PSMD6
USP32
PFDN4
BRIP1
TTC24
IQGAP3
ZNF217
BCAS4
TEX14
RAD51C
PARD6B
NPAS4
ALKBH2
UNG
C3orf14
APPBP2
ARFGEF2
DYNLRB2
BMP7
PPM1D
HIPK1
NCOA3
SLC12A9
HTR5A
FBXO32
YPEL2
DZIP3
CIP2A
DHX40
SGO1
SKA3
MRPL57
RRP15
CRBN
NDUFV1
XRCC2
EEF1AKMT3
METTL1
CYP27B1
TSR3
GNPTG
RNFT1
NUF2
TICRR
EDC3
PPM1E
FAM214A
ZFYVE1
NAA25
KIF18B
TROAP
FAM72C
BARHL1
CCT2
NEMP1
CA4
SMG8
TBX2
DUX4
TRIP13
BRD9
DYNC2I1
SUMF1
MOK
TTLL11
ESPL1
UTP20
FANCI
C12orf66
SPEF2
SRGAP2B
FAM72D
DCLRE1B
AP4B1
CREBRF
DENND2C
L1CAM
NEIL3
C16orf46
POLQ
SIKE1
CCNA2
SRGAP2C
FAM72B
SFSWAP
LYSMD2
TMOD2
HSDL1
DNAAF1
DEPDC1B
CSTF1
AURKA
PHTF1
TTF2
VAC14
OAZ3
MRPL9
POLR3GL
ANKRD34A
LIX1L
LOC101928764
ITPRIPL1
NCAPH
KLHDC4
IQSEC3
TRMT61A
CKB
HCFC2
GLT8D2
ATXN7
ZEB1
THOC7
RAB22A
UBE2C
MIS18A
NET1
TUBAL3
KPNA2
FBXO5
BIRC5
INKA2
DDX20
SMIM41
QSOX2
ATG101
ATXN1L
CPLX2
NAGPA
PLCG1
TRIM33
TTK
SPATA25
NEURL2
CTSA
ZSWIM1
VRK1
SCRT1
DGAT1
TMEM262
ZFPL1
CDCA5
ATP5F1E
TACO1
PRELID3B
FAM227B
DTWD1
KIF14
ATP1A1
ZHX3
DNAH7
VANGL1
TBC1D30
GNS
TMEM109
PRPF19
ZNF331
METTL2A
ABCA5
TSEN2
SPPL2A
CSDE1
XKR7
ATG14
VAPB
DLGAP5
DYRK1B
GABARAPL2
KCNH6
WASHC5
NSMCE2
CYB561D1
CEP128
NCKAP5L
GTF2H3
EIF2B1
CLTC
APRT
CDT1
RNF114
CSRNP2
SGO2
KAT2B
NEK2
PKIG
SERINC3
ARMC2
SLC25A24
CNPY3
RAD54B
FOXH1
PPP1R16A
NTAQ1
ZC3H18
MYL12A
MYL12B
LRFN4
DDX11
NUP107
SKA2
PRR11
SMC2
RNF40
CCDC189
INCENP
DCAF4
SLC37A1
RSPH1
CALCOCO1
FANCD2
MAD1L1
NUDT1
MRM2
PHLPP2
RRP12
RNF166
CTU2
UBE3D
DOP1A
SLC35B1
TASP1
TMOD3
CFDP1
NOL8
CENPP
DSCC1
CMC2
CENPN
GNAI3
GPR61
KLF10
DHX37
BRI3BP
WFDC3
DNTTIP1
NRAS
HELZ
RTF2
CKAP2L
ART1
BLM
ECT2
MTMR14
RAD18
SAP30BP
RECQL5
PSMA5
UGGT1
EXO1
SEL1L
AP4E1
PLEKHM3
SLC45A3
TBC1D31
GPSM2
NUP214
SPTLC1
KLHL24
AP5Z1
METTL2B
CHD1L
PRKAB2
TPTE
ATAD2
POLR2K
SPAG1
RRM2B
PRPF18
CCNG2
RABL2B
EIF2D
CHUK
GNA13
MTFR2
CCDC86
GTSE1
MCRS1
RMDN1
CPNE3
EPN1
ATR
PPRC1
PRKAR1A
FAM240C
C12orf45
RAB21
RRM2
DNA2
SQLE
RIPK2
MCM10
SPC25
PHF5A
ACO2
BICDL1
MRPL22
GEMIN5
WDR74
STX5
PPP1R12B
UBE2T
C16orf71
ANKS3
PRMT6
PREX1
PDE6D
COPS7B
CENPE
PSMD12
UFD1
CDC45
MARCHF8
VPS50
HEPACAM2
PDIA5
RABL2A
GFPT1
SPTLC2
WIPI2
TM9SF1
IPO4
BUB1
MOCS3
DPM1
HSPA5
NOTCH2
NUDT2
KIF24
EIF3C
EIF3CL
USP30
SARS1
CANX
CKAP5
TRPM7
FIS1
TCOF1
CLDN15
FRAT2
EEF2K
LEO1
TADA3
ARPC4-TTLL3
ARPC4
GMCL1
CHCHD6
NOTCH2NLB
QTRT1
ASPM
TMEM120B
SMYD5
GTPBP4
PDXDC1
SLC35C2
MLYCD
ZFAND2A
CLCC1
RBSN
INTS1
PROX2
DECR1
BCAS2
TSFM
RRP1
FANCA
PTTG1IP
MYO5A
SCFD2
NDUFAF6
CCNE2
NOP16
HIGD2A
CDK1
POC5
THOC3
RUVBL1
CDC14B
TOP1
CHFR
SRGAP2
FAM72A
LAMTOR3
NGDN
GOLGA5
KCNJ14
GRWD1
GPATCH4
NAXE
TMEM208
LRRC29
DNAJC25-GNG10
DNAJC25
GPR89A
DDX49
COPE
EEF1E1
TENT5C
INTS2
GFOD2
ASB8
PSRC1
PIEZO1
MCM7
AP4M1
PGBD5
XRN2
SPATA2
ZDHHC24
ACTN3
SLC27A2
BCAS1
CENPW
TSEN54
LLGL2
KIF11
NOTCH2NLC
RIDA
POP1
NXF1
THBS3
MTX1
TM2D3
CCPG1
C15orf65
MRPS23
RHNO1
FOXM1
PITPNB
SUSD6
MLKL
ACTR6
LRRC59
POLN
HAUS3
NPM1
MARS1
ARHGAP9
VPS13B
RASA2
PPM1H
ATP6V1C1
FBXL3
MDM1
ETFRF1
CFAP94
CIT
WDR4
NKX1-1
NOC4L
DDX51
PLK1
SH3BGR
LCA5L
CRELD1
AP3B2
PIAS3
DUS2
DPEP2NB
DDX28
MND1
POLR3F
DZANK1
PES1
UBE2G2
TMED10
AZIN1
MED13
GMPS
RAD9A
FBXW8
PPP1CA
TCTN2
SLC25A19
POLG
RTN3
ATL3
PTPRN2
NIT2
BUB1B
LZTS2
TWNK
MRPL43
ZNF530
CS
PDE4DIP
CCDC39
CEP55
MRPL3
FAM117B
TFRC
POLR2J3
YIF1A
TMEM151A
ZNF23
E2F8
NHP2
HEATR5A
TMEM183A
CFAP69
DENR
WDR48
SCN11A
DDX21
POLE3
C9orf43
ALAD
NARS2
TPRN
TMEM203
NDOR1
ARSG
ANKRD46
SLC16A6
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
DDX42
CCDC47
WWP2
NOB1
HSP90AA1
WDR20
KRR1
SLC39A2
METTL17
AMIGO1
AGPAT2
PLK4
TTC26
MYBL2
UTP4
DERPC
CHTF8
GSN
RAB14
TMEM231
PRDX2
RNASEH2A
ZNF622
UQCRC2
CHURC1-FNTB
CHURC1
TTC27
ZNF778
ZAR1L
BRCA2
MAMDC2
UTP23
PTRHD1
CENPO
NOTCH2NLA
ATG7
SDF2L1
CATSPERZ
ESRRA
WDR46
RGL2
PFDN6
KIFC1
SRPRB
C5orf51
TMEM67
TF
TOPBP1
RUBCN
KLHL36
GPR135
MTRNR2L2
MSH3
DHFR
GOSR2
MYBL1
GPR89B
TBK1
UBR7
GON7
OTUD7B
CDC6
ODF2
ZHX1-C8orf76
ZHX1
HEATR5B
GPATCH11
ZNF367
DYRK3
SPDL1
SPATA13
TFIP11
ZBTB9
SAMD10
E2F5
PRPF6
MAPK8IP1
KNOP1
IQCK
RACGAP1
AP1G1
RTKN2
GDPGP1
CIB1
ABHD4
DAD1
SHCBP1
INIP
FAM185A
MFSD5
ZNF507
TUBB3
MC1R
WASHC2C
NME1-NME2
NME1
LTO1
TBC1D15
GABPB1
RFWD3
MACROD1
GALK1
RAB5B
PMEL
CDK2
RAE1
MTRNR2L3
TBC1D19
FAM207A
USP54
C20orf27
GPR146
IGSF3
URB1
LTV1
RXYLT1
DPY19L4
PTPN1
VAMP3
MAPK8IP3
TKFC
DDB1
SLC22A15
FRG2
KIF20A
BRD8
WASHC2A
WIPI1
GOLGA3
DUS4L-BCAP29
DUS4L
COG5
NOMO3
NOMO2
TCP11L2
ABCC6
RPN1
MTRES1
ZDHHC9
DMXL2
MTM1
NBPF1
NUB1
LRRC37A3
ZMAT3
USP14
NBPF11
MON2
ATP6V0D1
AGRP
RAD51AP1
C12orf4
NOM1
FRAT1
TCTEX1D2
NEK11
ASTE1
KATNIP
GTF3C1
RBM19
SPTAN1
PCOTH
MIPEP
C1QTNF9B
GTPBP10
WDR43
SPATA33
TDRKH
TMEM249
SLC52A2
FBXL6
COQ2
CPSF1
SLC39A4
U2SURP
FSD1L
COX6A1
TRIAP1
TOMM40
CCDC146
ADAR
STOML1
PML
GSC2
RMI2
SDHAF2
CPSF7
OSGIN1
SLC25A26
C6orf89
DHODH
PKD1L3
ZGLP1
FDX2
ZNF473
VRK3
FANCC
YIPF4
DNAJB6
DYNLL2
IPO11
DIMT1
COG7
FBXO43
EDC4
BMT2
ERGIC1
RAD51
MFSD1
ANKRD42
CALM1
KIF3A
TSC2
NTHL1
FAM204A
CCNI2
METTL6
EAF1
VEZF1
COX6C
FAM220A
HEATR1
RNF181
TMEM150A
PUS7
RINT1
EIF1AD
CST6
BANF1
WDR47
TRIM25
DBR1
SPRYD3
HSF2
FAM133B
G2E3
MTPN
LUZP6
CSAD
ZNF740
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
SECISBP2
CKS2
SHQ1
BRMS1
RIN1
B4GAT1
PIP4K2C
CNOT10
RCE1
AKNA
KDELR2
TEX2
RNF216
UFM1
S1PR3
C9orf47
VPS33A
TMEM186
PMM2
NAGK
THAP5
DNAJB9
PPIB
MPHOSPH6
LSS
SNX11
CBX1
PAM16
DIAPH3
CPEB4
ADAT1
C1orf54
SENP5
SPG7
MXD4
NDUFB5
MRPL47
SGK3
UEVLD
TMEM65
PDPK1
CEMP1
ZNF821
CIART
NOL6
HSF1
BOP1
HAUS7
PSAP
POFUT2
MKRN1
ASCC2
MALSU1
ING4
ELOVL1
CDC20
RDH5
ITGA7
BLOC1S1
RHEBL1
KMT2D
STIL
NCAPG
MKI67
STX16
GLE1
ACTL6A
FCF1
AREL1
CHD1
ACBD3
RIOX2
FAM172A
COTL1
FAM91A1
ECSIT
CNN1
EIF2S1
ATP6V1D
RAB35
NGRN
GTF3C5
SH2B1
DDX10
TUFM
PARD6A
ACD
ZC3H3
KBTBD8
C16orf86
FADD
TOMM22
NAA35
ZNF446
ZNF324
PCNX3
MAP3K11
HSPA12A
ENO4
SFT2D2
ARNT
GNB5
SRD5A1
RAB41
PDZD11
KIF4A
PTPRH
C17orf97
RELT
MAP3K3
UBE2V1
CYP19A1
GLDN
DDX31
GTF3C4
MRPS35
LRPPRC
TBC1D13
CDIPT
SLC35A2
PIM2
RAB7A
EIF2B2
DGCR2
DAGLB
TSSK2
OAT
MAN1A2
PIP4P2
POLA1
ARHGEF5
CAMTA1
SYNGAP1
CUTA
PHF1
LSM14B
C14orf28
LYPLA1
ASMT
WDR17
NPIPB15
CCT5
ATPSCKMT
CENPB
CDC25B
VCPKMT
TUFT1
DENND4B
PSMD2
PRIM2
OXSR1
GPD1L
MAML1
KCND3
OVOL2
MARVELD3
DBNDD2
RECQL
GOLT1B
NME2
PDCD11
ATP5MD
MAGOHB
CBY3
ARPP19
KLHDC10
PPP2R5E
ACOX3
SYNJ1
LTN1
RRP9
PARP3
TRMT44
ZNF79
LMBR1
FAM98A
MAPK6
USF3
P2RY2
HOXA2
HOXA1
LRATD2
KIF15
KIAA1143
PRMT2
CMSS1
UBE3B
IFT88
OS9
TMBIM6
RAB13
SLC39A1
CREB3L4
PTBP3
JTB
NUDT4B
GNG10
SLC35D2
CNOT4
CSNK1G1
RPLP0
GCN1
WDR37
IDI1
GOLIM4
UTP18
MBTD1
RFC5
NAA20
PWP2
LOC102724159
E2F7
FKBP3
FANCM
ZSCAN2
TTLL5
ERG28
NARF
CYBC1
PUF60
TRAFD1
PTPN21
UMPS
DCAF7
OSGIN2
ZC3H14
BICD2
IQGAP1
CTDSP2
USP10
TLK2
MYO5C