ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10475247 | Hep G2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◣ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

NPAS4
STAT1
IQSEC3
MTFR2
WASHC2C
HTR5A
CPLX2
RAB37
FANCD2
TDRD7
RTF2
XKR7
QTRT1
CHGB
VPS33A
WFDC3
DNTTIP1
SHQ1
NOC4L
DDX51
SHCBP1
CEP55
TSR3
GNPTG
STX16
LAMP1
CRNKL1
CFAP61
SSNA1
ANAPC2
LRRC59
NUF2
HEXA
INSM2
WASHC2A
NOL8
CENPP
PRR5L
COMMD9
ABT1
CENPW
NUDT15
SPATA25
NEURL2
CTSA
ZSWIM1
RNF166
CTU2
TSN
COPS8
SGO1
TFIP11
ITPRIPL1
NCAPH
CDK5RAP1
IDH3B
MRPL27
EME1
STX18
GINS1
NOMO3
NOMO2
ABCC6
TRMT61B
NOL10
CEP135
GTF2H3
EIF2B1
ZAR1L
BRCA2
VAC14
MAPK8IP2
TTC24
IQGAP3
RABL2B
CKAP2L
CCDC86
MRM3
GLOD4
EXO1
WASHC5
NSMCE2
TM9SF1
IPO4
BIRC5
SGO2
CWC25
CDKN2C
FAF1
TRMT6
MCM8
ZNF721
PIGG
LDAH
ATP6V0D1
AGRP
MCM10
TMEM208
LRRC29
HMGB1
DUS2
DPEP2NB
DDX28
MARCHF8
COMMD4
MRPL21
IGHMBP2
CCNA2
PDE6D
COPS7B
NOXO1
PLK1
TBL3
RPS2
RNF151
LSM12
G6PC3
NME1-NME2
NME1
MTHFD1L
NUBPL
PBK
NKX1-1
SPNS1
LAT
DEPDC1
KIF15
KIAA1143
RAD54L
ZNF358
MCOLN1
PCNA
TMEM230
PCOTH
MIPEP
C1QTNF9B
SLC6A12
EDC3
TRIP4
PCLAF
SREBF1
SCFD2
COX6A1
TRIAP1
OPA1
CCDC150
KNOP1
IQCK
BLM
KLHDC4
MAD1L1
NUDT1
MRM2
FAM227B
DTWD1
TIMM23
H4C12
H4C11
H2BC15
H2AC15
VRK1
CDC6
NDUFAF5
ESF1
SMIM17
TMEM186
PMM2
TTF2
INTS12
GSTCD
EXOC2
CMTR1
PLEKHM3
TRIP13
BRD9
CCNB2
FAM180B
NDUFS3
KBTBD4
MYBL2
FANCI
ELOVL1
CDC20
NAGPA
RDH5
ITGA7
BLOC1S1
SEBOX
TMEM199
POLDIP2
BARHL1
UNKL
C16orf91
FAM187A
EFTUD2
CCDC103
RMI2
BUB1
VTA1
NMBR
ZNF23
KLHL12
NUP107
BUB1B
TRMT1
NACC1
MIS18A
ENPP3
MED23
DSN1
SLC35A3
ZBTB9
HMOX1
RTEL1
STMN3
PEX3
ADAT2
CELSR3
TSSK4
PINX1
TROAP
IPO11
DIMT1
XRCC2
AP5Z1
NEIL3
RRM2
HASPIN
SNF8
RIPOR3
SKA1
DCAF10
ESCO2
RNASEH1
WIPI1
BHLHE40
LSM5
AVL9
TOP3B
PDE11A
RBM45
NEK10
KIF18B
C8orf33
NOP9
DHRS1
LTB4R2
DDX19A
BRCA1
YARS1
S100PBP
G2E3
KCTD5
TBC1D19
C16orf89
ALG1
KIF20A
BRD8
CLUAP1
C16orf90
SURF6
TMEM262
ZFPL1
CDCA5
VPS53
RBM19
TRAIP
KATNA1
STIL
MRPL44
IRF9
LTV1
SF3A3
UTP25
UGGT1
ADPGK
GATB
RBM42
USPL1
AP3S2
POLR2J3
GTF3C3
C2orf66
EIF2B3
LPIN1
TGM1
RABGGTA
NTSR2
KIFC1
CEP128
AARS2
GNG14
FBXW9
SLC45A4
GPN2
GPATCH3
SLF1
KIAA0825
CCNB1
COMMD1
KLHL18
KIF9
TMEM242
MOB4
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
POLR3F
DZANK1
ZNF688
ACOX3
FN3K
CDS2
ZNF530
UNC45B
NLE1
ATG14
GGH
TOX4
RAB2B
HJURP
NUP214
SKA3
MRPL57
MRPL40
HIRA
SRGAP2
FAM72A
PUS1
CEP43
RANBP6
KIAA2026
DPY19L4
CFAP20
METTL9
RTKN2
MKI67
MYBL1
IQCH
AAGAB
MTIF2
SNRPC
SUMF1
CCAR2
C8orf58
AURKAIP1
MAD2L1
FKBP3
FANCM
SPRYD4
CTNNBL1
UBA52
SLC39A3
CRLF3
ATAD5
WDR53
FBXO45
CLCN7
SKIV2L
NELFE
RAD54L2
RAD51
PKIG
SERINC3
MRPL39
CFAP410
VPS35
FURIN
SRGAP2C
FAM72B
PSMF1
TEFM
CCT4
CORO1A
FRA10AC1
TF
TOPBP1
SECISBP2L
POU5F1
TCF19
CCHCR1
TRMT44
ELL
GNAL
CHMP1B
NCAPH2
LMF2
CDC25A
PMS2
AIMP2
MRPS23
REXO5
ERI2
ZNF461
FBXO5
TTC26
GPN1
CCDC121
CENPS-CORT
CENPS
MUL1
PPIL4
CDK1
LIN28A
GMCL1
DEXI
CLEC16A
PRADC1
CCT7
KCTD18
WDHD1
SOCS4
DSCC1
TAF3
COG7
GTSE1
MFSD1
SNRPB2
SRF
CUL9
FRG2C
NRL
DCAF11
CPSF1
SLC39A4
TOMM34
STK4
EXOSC6
TDP1
EFCAB11
ATAD3B
DCLRE1B
AP4B1
SCFD1
PALB2
DCTN5
UTP20
DZIP3
CIP2A
TPRN
TMEM203
NDOR1
MMUT
CENPQ
TOMM22
NAT10
TAF13
ERLEC1
ASB3
FIGNL1
CWF19L1
MDP1
CHMP4A
PSMC3IP
DCP1A
SRSF11
LRRC40
MFAP3
FAM114A2
MIA2
GAS8
DBNDD1
GPRC5C
ZNF778
USP30
AAR2
CBWD1
NOL7
RPS7
STARD6
C18orf54
ATR
TTK
MRPL4
RFC5
AURKB
TRMO
ZNRD2
FAM89B
EHBP1L1
RPL6
PTPN11
LONP1
CATSPERD
DDX1
OXNAD1
DPH3
CSTF1
AURKA
MARS2
ZNF26
KIF3B
HEATR5A
CCNL1
URB1
DIDO1
GID8
SHC1
FLAD1
CKS1B
MDN1
CASP8AP2
TIGD1
EIF4E2
METTL3
FAM228B
TP53I3
SF3B6
COQ9
CIAPIN1
EXOSC5
BCKDHA
NUDT2
KIF24
POLD3
TFPT
PRPF31
LONP2
ABCC11
ZNF696
ZGPAT
ARFRP1
EIF2D
TCTE3
ERMARD
ID1
FAM149B1
ECD
NMNAT1
LZIC
MAGOHB
WDR25
WARS1
CA4
DNTTIP2
TMEM129
TACC3
SLBP
METTL15
KIF18A
SEPTIN9
ZNF292
HAUS5
TTLL4
PARPBP
NUP37
OR6B2
NDUFA10
DLGAP5
RFC3
ERI1
MTRNR2L1
PPIH
NET1
TUBAL3
TIAL1
ALG10
CCL16
CCL14
THOC1
COMMD2
NAA20
UTP4
DERPC
CHTF8
UTP15
ANKRA2
FBXO4
GOT2
SRRM3
ZNF165
OR1F12
TSPAN10
NPLOC4
SAMD10
PRPF6
NGDN
JPH4
UBE2G2
UBFD1
EARS2
MND1
DBNDD2
NDC80
METTL4
TTF1
CFAP77
NFE2L2
GFM1
MKS1
C5orf51
CFDP1
NDUFAF1
TPRKB
FAM161A
NDUFS7
GTF2H2C_2
GTF2H2
PSME3
BECN1
PLK4
CPEB4
MRPS31
NFX1
PRCP
DDIAS
CASC3
RANBP2
THOC3
TACO1
SLC24A1
INTS14
SNRNP200
WDR90
ATG7
RUNDC1
PTGES3L-AARSD1
PTGES3L
LOC101928764
PPWD1
CENPK
TRIM37
TMEM248
DOCK6
C6orf89
FAM200B
ATIC
SCRN3
CIR1
KANSL3
FER1L5
ISOC1
NAGK
RRN3
FAM120B
DBI
C2orf76
CHEK1
TMEM104
NAT9
ITGB2
CRBN
NAP1L4
EMC8
COX4I1
H2BC14
H2AC14
PYGB
WDR4
RTN4RL1
DPH1
H4C3
H1-6
LAMTOR5
LOC112694756
DTD2
TMA7
CCDC51
ATRIP
SECISBP2
CKS2
NSFL1C
STOML2
PIGO
FAM214B
C16orf46
CFAP54
MTF2
FANCA
WDR36
CEP162
RGS20
ATP6V1H
PPP1R3E
BCL2L2-PABPN1
BCL2L2
FAM72C
CENPH
DUS1L
SCIMP
PHOSPHO2
CCDC173
MTRNR2L2
MSH3
DHFR
SYS1
DOK3
DDX41
ARFGAP1
EMC4
BRIX1
FCF1
AREL1
TPX2
STK32C
LRRC27
PGRMC2
ZWINT
FBXW8
DHDDS
TNNI2
SYT8
ZGRF1
LARP7
IARS1
TTI1
RPRD1B
GRN
RTTN
XRN2
GPS2
EIF5A
SLC38A7
TTC23L
NCBP2AS2
NCBP2
C6orf136
C12orf66
RAD50
LRRC37A3
CCDC137
POMP
PDE6G
TBRG4
PARG
TOMM5
ARFGEF2
CCDC59
POLR2C
STK11IP
BAIAP2
WDR62
THAP8
ARHGAP11A-SCG5
ARHGAP11A
TUBA4B
TUBA4A
STK16
GLB1L
HINT3
NUS1
VPS25
WNK4
SMC2
ZNF497
A1BG
RAD9A
PPP1CA
WDR45B
PPM1H
BRAP
ACAD10
SPAG16
E2F8
AUNIP
LCMT1
GPATCH4
NAXE
SLC30A6
EBNA1BP2
CFAP57
MAGOH
ZBTB49
LYAR
TAF10
RRP8
ILK
CA5A
TSPO
MCAT
RAB5IF
SOD2
WTAP
TRMU
SLC25A10
MRPL12
PPIL3
NIF3L1
KXD1
ROMO1
NFS1
POLQ
DDX31
GTF3C4
PNPT1
SEC14L1
CFAP69
RPL37
CARD6
DDX46
RPS15A
TCP10L
SAR1B
HNF4A
CDK7
RAD18
FAHD2A
ATXN2L
TBCEL-TECTA
TBCEL
PDE4A
CDIN1
PGS1
TSFM
PFAS
HPCAL1
SRP68
ZACN
GALR2
FBXW2
YWHAB
REEP4
MRPS17
RPTOR
FAM207A
OTOS
COPS9
WDR70
NUP155
ATP6V1C1
TRMT5
SLC38A6
BDP1
NUP42
TICRR
DBF4B
FITM2
BSPRY
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
SNRPD1
RFC1
EEF2KMT
ATP2B2
RPS5
TOMM6
PRICKLE4
FRS3
ALKBH3
DUX4
DYNC2I1
MRPL3
PSMD9
HPD
TSEN15
E2F3
SAP30BP
RECQL5
TMEM101
TCTN1
IFT172
GCKR
FNDC4
GTF2H2C
SRGAP2B
FAM72D
POLR3E
DIAPH3
LENG1
AGK
SF3B5
NPHP1
MTLN
RPS21
ZSCAN9
LHFPL5
CLPS
ZSWIM7
TTC19
MTERF1
MFF
SORL1
CNPY3
SYP
ZWILCH
SNAPC5
RPL4
EIF1AD
CST6
BANF1
ERCC5
KIF2C
HEATR1
ZKSCAN8
NPIPA3
NPIPA2
PLA2G10
NEK2
SRPRA
UPF1
SEC13
DYNLL1
SMC6
GEN1
LRRC57
HAUS2
SNAP47
JMJD4
CACTIN
SLC35F5
SLC35E1
ARL8B
VPS11
FOXJ3
PPIG
NCOA5
ZNF830
CCT6B
SLC25A26
YIF1A
TMEM151A
SLC39A11
CBWD2
LSM2
HSPA1L
HSPA1A
SLC44A1
TADA2B
CCDC96
FAM53C
CDC25C
DLGAP3
DNMT3A
PRKAR1B
DDX18
HROB
RABL2A
EPRS1
BRF2
KIF23
DDX21
TMEM222
BUD13
TAF11
ANKS1A
ASB6
FAM24A
THAP4
ATG4B
AHDC1
OAZ3
MRPL9
SLC7A6OS
PRMT7
NDUFA12
F7
ITGB3BP
EFCAB7
VPS50
HEPACAM2
UBE2Q1
CHRNB2
WDR43
TK1
CXXC5
EIF4A3
MRPL20
CCNL2
UCHL5
RO60
COX16
EEF1AKMT3
METTL1
CYP27B1
TRIM52
ERBB2
PGAP3
H3C15
H3C14
H2AC19
H2AC18
H4C15
H4C14
AHI1
PPID
CCZ1B
TRIB1
FASTKD1
MIPOL1
POLR2J
PRIM2
ZNF501
POC1A
GARS1
SPSB3
MRPS34
EME2
TJAP1
NME3
FAM98B
LRP2BP
ANKRD37
ATXN1L
MRPL58