ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7135367 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◣ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

KIF5C
MTRNR2L2
MSH3
DHFR
MTRNR2L1
MTRNR2L8
PLA2G1B
DUX4
BAZ2A
ATP5F1B
ARMC1
PLTP
PWWP2A
MTOR
GOLGB1
XAB2
STXBP2
PCP2
NOL6
ZNF48
TBC1D10B
MYLPF
PODNL1
DCAF15
WBP2
SWI5
GOLGA2
SERPIND1
GRPEL1
COPZ1
RAB5B
PMEL
CDK2
PXMP4
LCA5
HBP1
CAMSAP3
ZNF564
NEMP1
NAB2
STAT2
APOF
ANAPC5
ZNF195
JUP
FH
FLYWCH2
CHCHD1
ZSWIM8
FOXJ2
POTEF
OS9
NPR1
ILF2
PRCC
USP1
WBP11
C12orf60
MRPS30
RAB11B
AP3D1
BBS12
PSMA2
MRPL32
SP2
PIH1D1
ALDH16A1
LRCH4
FBXO24
TDP2
ACOT13
COX6A1
TRIAP1
DNMT3B
COMMD7
HSCB
CHEK2
TMEM160
SHC1
FLAD1
CKS1B
RRP36
MEA1
KLHDC3
TESK2
MMACHC
CCDC163
NPPA
DDX49
COPE
SZRD1
TRIM63
C12orf65
SPATA25
ZSWIM1
RGPD1
RGPD2
MAMSTR
BRCA1
RBM8A
PEX11B
PRR13
RBM42
ELP5
CTDNEP1
GABARAP
PDLIM1
RNF40
CCDC189
MRPL24
HDGF
PPP2R5B
ATG2A
ZDHHC16
EXOSC1
RAB30
RRP9
PARP3
GSC2
PIK3CA
STAP2
MPND
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
G3BP1
BICRA
DNM2
TENT5B
TRUB2
COQ4
AP2S1
ARHGAP35
WDCP
ZWINT
VARS2
GTF2H4
CREB3L2
MISP3
SAMD1
C19orf67
MRPL37
CYB5RL
IMP4
CCDC115
XPC
LSM3
SSX1
INCENP
ELL
RNF181
TMEM150A
WDR46
RGL2
PFDN6
STAT3
RBL2
PRMT5
KHSRP
INPP5B
CNPY3
TMEM67
LIMS1
POTEE
CENPF
SCOC
POLR2G
ZBTB3
SND1
SARNP
ORMDL2
ZCCHC17
SNRNP40
DCTN4
CCNG2
PHF19
CGGBP1
AK2
ZNF654
CLDN12
TTF2
NFYC
TMTC3
CEP290
NEU1
CHD8
CCDC61
TRIP4
PCLAF
MTFR2
TUT1
MTA2
TBC1D31
ZNF552
LIN37
PROSER3
HSPB6
ERO1B
ZNF473
VRK3
CDC23
DNAJA3
PITX3
GBF1
TOM1
ARID4A
NBR1
EMILIN1
KHK
OST4
KXD1
MTMR12
MARCHF2
MEAK7
SAGE1
CT45A10
TROAP
LARS1
ZSWIM3
ACOT8
SYNE4
LOC101927572
ALKBH6
HEXIM2
ZNF691
ACTL6A
SLC33A1
SERTAD3
GOLPH3L
RBM27
RPP40
ASB8
NDUFAF8
TEPSIN
FLYWCH1
SNAP29
PI4KA
NDUFA5
SWSAP1
MRPL34
DDA1
ABHD8
TNNI3
DNAAF3
PRRC2B
PRPSAP1
CYTH2
XRCC4
TMEM167A
FAM32A
RIC8B
FAM189B
SCAMP3
RPL22
RNF207
GET3
STK40
MAP3K3
WBP1L
SHKBP1
RECQL
GOLT1B
PPP1R12B
UBE2T
SH3GL1
CHAF1A
OGFOD1
NUDT21
LMOD1
TIMM17A
ZMAT2
HARS2
HARS1
BTF3
FBXO8
CEP44
RBM23
VMO1
PSMB6
GLTPD2
STT3A
ADAMTSL4
TRAPPC6A
BLOC1S3
KCNAB2
ELAC2
SPSB3
MRPS34
EME2
RDH12
RDH11
PHKB
ITFG1
AGER
AGPAT1
RNF5
TUBD1
RPS6KB1
WRN
PURG
COX8A
THAP1
CHD6
PSENEN
KRT10
CSPP1
COPS5
ASIC3
CD69
DHRS11
NHP2
PARS2
COPS4
SLC25A19
TDRKH
SAP30BP
RECQL5
CENPA
SUOX
MCM3
KIFC3
NFE2L1
TMEM205
CCDC159
ZNF213
RAB3D
PKLR
FDPS
PLPPR2
RPS5
PCOLCE
MOSPD3
CRADD
ADAMTSL5
NBPF12
HSPA13
EMP3
DNAJC12
INVS
ERP44
ATG9B
ABCB8
MAP11
LAMTOR4
IP6K1
RALGDS
MED25
FUZ
CLIC2
TSC22D3
OGG1
CLDN9
YLPM1
OPN1MW3
OPN1MW2
OPN1MW
MRPL4
FKBPL
ATF6B
CLSPN
VPS50
HEPACAM2
SPC24
HINT1
KDM4A
RSPRY1
PSME3IP1
GATAD2B
DHRS3
SYNGR4
SLC7A8
POC5
TOMM40
HSPA5
LIN52
ALDH6A1
ZNHIT1
PLOD3
C5orf51
CDCA8
C1orf109
C9orf85
ABHD17B
INTS3
CCNB3
AKAP4
RRP12
WDPCP
MDH1
GRN
PCGF2
RTN4RL1
DPH1
TOM1L2
DRC3
TCP1
MRPL18
CLN8
POT1
LSM4
DNAL4
RAB11FIP1
FADS2
EXOC4
LMBR1L
NFIA
TSPAN32
C11orf21
RNF14
GPR84
TTYH3
EIF3C
EIF3CL
AKT2
NDUFA6
MSANTD4
CHCHD3
STIP1
TPCN1
IQCD
ENOX2
OSBP
POU5F1
TCF19
CCHCR1
PSMA5
ANP32E
JMJD1C
EPS15
FAM117A
HDGFL2
UFD1
CDC45
FAM185A
RABL3
GTF2E1
JPT1
EXOSC5
BCKDHA
ZMPSTE24
KIFC1
TMCO2
C6orf47
APOM
ARHGAP45
CPSF1
TSNAXIP1
RANBP10
GPANK1
CSNK2B
LENG1
LY6G5B
CFAP36
ZNF57
OSBPL2
PDXP
NBPF11
MIIP
NFATC2IP
PDF
NIP7
COG8
MSTO1
PSMC4
THRA
MED24
AAAS
CHPF2
ABCF2
NGDN
UBR2
SAMD4A
HOMEZ
FBXO46
SNW1
TMBIM6
CDK11A
ESYT1
ZC3H10
WEE1
WDFY2
TCIRG1
NDUFS8
RPL41
PACSIN2
ONECUT3
YIPF2
TIMM29
MAN2A2
ZNF277
DOCK4
LMAN2L
PNLDC1
RAD54L
CREBRF
TSR3
GNPTG
DDX19B
AARS1
SYVN1
SH3GLB2
MIGA2
VPS52
RPS18
B3GALT4
ZSCAN31
SLC43A3
BAIAP3
TMEM270
METTL27
DYNLL1
PALB2
DCTN5
CDK5RAP3
TCTN3
PNKD
GPBAR1
AAMP
CCDC120
TFE3
PSAP
GTPBP1
JOSD1
SPTLC2
PHB
NUCKS1
PPM1B
INTS5
GANAB
TBCC
BICRAL
ETV5
BCAS3
SKIV2L
NELFE
AKT1S1
PNKP
KAT6B
SUCO
ABHD4
DAD1
TBC1D17
KLHDC10
RFX5
WASHC1
SLC25A28
UBXN11
NRL
DCAF11
ZNF92
TARBP2
MAP3K12
NPFF
NLK
CNOT1
PTPRF
UCP3
YIF1A
TMEM151A
MCCC1
DDX39A
ANAPC15
LAMTOR1
GGCT
ANGEL2
PEX6
PPP2R5D
ALDH4A1
ALKBH2
UNG
SF3B5
ISOC2
UNK
H3-3B
NYAP1
RBM15
SYCE1L
MON1B
ERCC1
TNFRSF1B
USHBP1
BABAM1
NCK2
PLAAT4
MAST1
RTBDN
TMED4
DDX56
SIRT2
NFKBIB
HNRNPL
CASS4
MDN1
TFB2M
CNST
CASP8AP2
FZR1
DOHH
MVK
ZBTB45
ZNF683
TRIM28
PHF12
CPEB4
GPD1
COX14
MAF1
CYC1
KIF22
TSACC
CCT3
DNAJC16
CASP9
GSTT2B
GSTT2
DDTL
DDT
ZBTB8OS
RBBP4
MAP1LC3B
FBXO31
WDR97
DHX8
POLR3GL
ANKRD34A
LIX1L
VCPIP1
C8orf44-SGK3
LEPR
LEPROT
ZCCHC8
ZNF254
DNAJB5
TYW1
SBDS
PDE4A
ZNF273
ZNF414
ARF4
POLRMT
FGF22
ETV2
COX6B1
PAQR6
NEK2
CAMTA1
LAG3
UBE2L3
TOGARAM1
KLHL28
SLC25A25
RIMBP3B
RIMBP3C
RB1CC1
STAT5B
PTMS
C19orf81
IL18BP
KCTD9
CDCA2
LSM2
HSPA1L
HSPA1A
PGBD4
EMC7
PHTF2
KDM3A
TMEM60
NDUFB5
MRPL47
ZSCAN32
ZNF174
SYP
RCSD1
PRICKLE3
BAGE4
BAGE3
BAGE
RMND1
ARMT1
TOP2A
AVEN
GET1-SH3BGR
GET1
NDUFS2
ADAMTS4
TEX19
UTS2R
TBC1D14
MLH1
EPM2AIP1
TMED1
KRBA1
APOBEC3D
APOBEC3C
DLGAP5
NOP16
HIGD2A
GTF3C5
MARS1
ARHGAP9
TK1
EMC9
OSCAR
NDUFA3
RNF31
PSME2
PHKG2
TMEM265
PSME1
GGA1
PNPO
RBM4
RPGRIP1
ZSWIM4
TMEM218
DCLRE1B
AP4B1
PSMD3
MDM1
STRIP1
HINFP
ALG10B
RAP2B
COL18A1
SRL
SNRPD2
QPCTL
EXOSC2
MTFR1
NIPA1
VAV1
SH2D3A
TULP2
NUCB1
GOLGA6L7
CCDC146
UBN2
RIOK3
CEP128
NUDCD1
DCAKD
NMT1
SLC39A1
CREB3L4
TIMM21
FBXO15
TUBA1C
PAF1
CRTC2
JTB
SPRYD3
ABCA7
PAXBP1
MFSD4B
CMTR1
C19orf48
CNPY2
CLP1
YPEL4
USP48
ZNF627
ZNF749
TNKS
RDH13
TMEM74B
RFX1
RFXANK
BORCS8
CAT
PI4K2A
MORN4
ADNP
ZNF595
GRK6
SKA2
PRR11
BRMS1
RIN1
FAAP24
CEP89
TRAPPC9
RBM14-RBM4
RBM14
DBT
MOB1A
RHOQ
ATP6V1E2
GTPBP3
ANO8
RPRD2
ZBTB32
SPDYE6
LOC100289561
TIMM50
SERPINI1
PDCD10
TMEM245
HNRNPR
IFITM3
SDSL
TPRN
TMEM203
NDOR1
ATP6V1E1
BCL2L13
C22orf39
ATP5IF1
KATNB1
ZNF189
MRPL50
NCKAP1L
DPH2
B4GALT2
ATP6V0B
CNOT3
MSL3
TMEM63B
MRPL14
SLC25A42
ZNF226
HDC
FAM72C
SYNGAP1
CUTA
PHF1
SH2B1
TUFM
ERV3-1-ZNF117
ERV3-1
IQGAP1
ATP5PO
RNF224
RNF208
CYSRT1
UBL5
PIN1
KPNB1
ZNF3
COPS6
RFWD3
RHCE
IL4I1
PYCR2
TXNL4B
DHX38
ATF5
NUP62
ZNF510
BAHCC1
BPGM
ZNF280A
NUDT2
KIF24
GLRX5
ADK
AP3M1
PSMD8
ABHD2
MEIOSIN
H2BU1
H2AW
PRMT1
HSPA1B
CALCOCO1
AKTIP
SLC4A2
CDK5
NOP53
ARRDC4
LARGE2
HMGCR
PEX16
RPL18A
RAB3A
ZDHHC12
ACTR6
CACTIN
STOML2
DNAJB1
TYW1B
FAM214B
NAIF1
TECR
TCERG1
GOSR1
SHPRH
TMUB2
GATD3B
GATD3A
ZFP36
PLEKHG2
ZFYVE1
THAP5
DNAJB9
TPX2
NAA80
IFRD2
HYAL3
LPIN1
SNRNP25
POLR3K
SLC2A8
FRYL
MORC3
SPAG4
GPR85
E2F3
CTU1
IFI35
RPL27
VKORC1
PRSS53
ENSA
GSTA4
CEP120
TRMT1L
SWT1
CORO2A
GNA12
SPAG7
PRUNE1
MINDY1
ZNF557
MRPL35
IMMT
HMGCS1
RAB6A
OXSR1
KISS1R
R3HDM4
SP1
DUSP11
C2orf78
POLN
HAUS3
PRADC1
CCT7
RPS27A
CLHC1
CEP152
CEP20
ELOVL6
CCL25
FAM53C
CDC25C
MTR
RPS6KA5
DGLUCY
MRPS21
DERL3
TIMM10
SMTNL1
CCDC174
TP53BP1
ZBTB5
BORCS6
CKM
SAP30
PDCD6IP
FANCD2OS
BRK1
C14orf93
BCKDK
LRFN3
KAT8
LAPTM4A
TMEM191B
ETFB
NKG7
CLDND2
HYKK
FLT3LG
GIP
UBFD1
EARS2
DHODH
PKD1L3
SYS1
UMAD1
TIMM9
KIAA0586
EHD1
PRPF4
CDC26
VMAC
NDUFA11
CAPS
CLTA
WDR59
ZNF56
MTMR4
XRCC5
TMEM191C
SEPTIN4
NFKBIL1