ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9187413 | MIA Paca-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◣ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

SNX16
FRG2C
COL23A1
MTRNR2L1
DUX4
FRG2
MAMDC2
MTRNR2L2
MSH3
DHFR
HTR5A
SLC27A1
NXNL1
CYP4F11
MTRNR2L8
GTPBP6
BTNL9
NPAS4
TMEM242
ART1
TDRD7
PHRF1
L1CAM
MAPK8IP2
WASHC2C
CPLX2
POLR2J3
IQSEC3
LOC102724770
DGCR6
PDE6D
COPS7B
TTC24
IQGAP3
CRYAA2
CRYAA
MTFR2
POLQ
CKAP2L
PBK
CCNB2
TRIP13
BRD9
SRGAP2C
FAM72B
PGBD5
NUF2
KIAA0895
ANLN
RGS14
LMAN2
TNFRSF1B
HMGB1
FAM240C
NOL8
CENPP
TMED9
B4GALT7
RTTN
QTRT1
KIF20A
BRD8
CPEB4
EXO1
GIT1
ANKRD13B
PSEN2
VPS9D1
RIPPLY2
CYB5R4
SHCBP1
EAPP
METTL3
TATDN3
NSL1
SCRT1
DGAT1
SRRM3
FBXO5
EPN1
NEK2
ARHGAP45
CAMTA1
ESCO2
FAM72C
SRGAP2B
FAM72D
FAM24A
SLC39A3
ANKHD1-EIF4EBP3
ANKHD1
COMMD2
COX16
KIF18B
XKR7
UBE2C
CCNB1
UTP15
ANKRA2
CCNG2
NUDCD2
HMMR
MUC3A
CEP43
LIN28A
BNIP1
BIRC5
DZIP3
CIP2A
RRP15
RAD51AP1
C12orf4
MRI1
C19orf53
TMEM41A
MKI67
PIH1D1
ALDH16A1
STAT1
ZNF688
TRMT1
NACC1
GSN
RAB14
GALK1
DLGAP5
MAST1
RTBDN
NUDT15
EIF2D
PAXBP1
SECISBP2L
HASPIN
CRBN
RRM2
XRCC2
PRR5L
COMMD9
USP30
DBF4B
HPCA
CCDC200
AURKB
ELOVL1
CDC20
POU2F1
SMG8
SRGAP2
FAM72A
PARL
C5orf51
DLGAP3
UNC45B
NLE1
COX6A1
TRIAP1
NBPF1
SOD2
WTAP
CXCL5
TTK
MIS18A
PHACTR2
SYP
CENPW
MMUT
CENPQ
SRA1
SLC35A4
APBB3
DNAH7
KCTD18
CDK7
NKX1-1
VRK1
SAR1B
WTIP
LMX1B
TCAF2
SLC39A7
RXRB
RING1
HSD17B8
CCDC92B
WDR36
EDC3
LGALS8
CDKN2AIPNL
NOXA1
NDUFS4
GBA
TSEN54
LLGL2
CASKIN2
TBC1D13
POLR3G
MBLAC2
OPRL1
RGS19
LKAAEAR1
MCM7
AP4M1
ZNF558
ZNF555
TDG
C12orf73
KCTD9
CDCA2
FAM53C
CDC25C
ITGB3BP
EFCAB7
STX16
ZNF165
OR1F12
ZGRF1
LARP7
RFC3
MTF2
TRUB2
COQ4
VTA1
NMBR
ASNS
NSA2
GFM2
VPS25
WNK4
SVOP
MNAT1
H3C15
H3C14
H2AC19
H2AC18
H4C15
H4C14
RBBP5
SZRD1
SESN1
CEP57L1
FAM89A
LIN9
FXN
DDHD2
AGFG2
CHGB
MUC20
FAM227B
DTWD1
CFAP69
TMCO3
DCUN1D2
FLT4
FANCD2
ZNF358
MCOLN1
CASC3
UTP20
ZAR1L
BRCA2
DNA2
VPS35
STX6
MRPL40
HIRA
CWF19L1
CCNC
RGL1
ARPC5
SHQ1
PLK1
JUNB
SYT5
HOOK2
ITPRIPL1
NCAPH
GTF2H2C
GTF2H2
UTP25
CDC25A
MRM3
GLOD4
CCDC77
RHNO1
FOXM1
FKBP3
FANCM
KDM5A
WDR70
NUP155
MCCC1
RFX1
AMZ2
PIK3CD
MRPL27
EME1
HCFC2
GLT8D2
KIFC1
LSM5
AVL9
BARHL1
NDUFS7
YBEY
MCM3AP
LONP2
ABCC11
ZWINT
SELENOT
CDK1
SUPT7L
SLC4A1AP
OSCAR
NDUFA3
TMEM248
STX18
NSUN4
SPATA25
NEURL2
CTSA
BBS5
SMC4
IFT80
DAZAP1
GAMT
C17orf49
RNASEK
BCL6B
HEATR1
ECSIT
CNN1
KXD1
MRPL39
TTC5
RAD51
MCM10
CCDC91
SMARCD2
SPNS1
LAT
ASPM
BRIX1
TFAP4
ARID1A
PTPRH
ISY1-RAB43
ISY1
R3HCC1
LRRC37A3
SMC6
GEN1
GPATCH1
GNAL
CHMP1B
DHX8
GTSE1
MYBL2
CFAP299
GPAM
MOSPD2
ZSCAN30
FANCB
RAD54L
GOLGA7
H1-10
P2RX5
BLM
DCLRE1B
AP4B1
DNMT3A
PLXNA1
VPS33A
CENPS-CORT
CENPS
DDX18
POLR3H
CDIN1
MND1
AXDND1
UBE3B
C5orf34
GXYLT2
RTN4RL1
DPH1
DDX11
TRMT61B
PTRHD1
CENPO
MRPL44
ZNF398
PEX12
AP2B1
COA6
VPS72
PIP5K1A
HK2
ZNF425
ZNF461
KNL1
ENPP3
MED23
FRA10AC1
ATL1
MLPH
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
PCOTH
MIPEP
C1QTNF9B
ASF1A
WDR62
THAP8
VPS16
PCED1A
ANKRD31
HRK
SMYD5
SUMF1
IPO11
DIMT1
QSOX2
SLC19A1
TAF12
SGO1
RBM19
BOLA2-SMG1P6
SKA1
GGH
CCDC88A
SLC35A3
DDX1
PWWP2A
NAPA
MTBP
MRPL13
ALG10B
MRPS35
ASMTL
PPWD1
CENPK
REX1BD
IGBP1
RNF187
CENPF
GPSM1
CARD9
RSBN1L
MAP3K7
LOC389831
NOTCH2NLB
PRKCQ
TCHH
DIAPH1
ZNF680
THAP10
LRRC49
RUBCN
C10orf88
RNF145
FYTTD1
DLX5
TTC26
MAK16
TACO1
ZBTB22
TAPBP
DAXX
C18orf21
SMIM40
ZNF148
MFAP3
FAM114A2
KHDRBS1
PIMREG
PPIL4
AIPL1
POC1A
GTF2H2C_2
CCDC106
U2AF2
DNAJC11
ZNF581
ZNF580
TLE2
ZMPSTE24
CREBRF
PDE8A
ZSCAN22
CMSS1
HAUS7
QKI
TM9SF1
IPO4
MPHOSPH10
MCEE
MTR
NPIPB15
RFXANK
BORCS8
MTERF1
SOS1
GFM1
OGDH
WWP2
NOB1
HNRNPH1
LRRC6
SCFD2
CDCA8
C1orf109
TTLL4
MRNIP
NSFL1C
DCP1A
SEC24B
SERPINB6
ZNF331
RIOK1
CAGE1
ZNF23
CALR
RAD23A
FARSA
IPO13
DEPDC1
H6PD
KDM5B
NDUFAF5
ESF1
FAM207A
SMIM12
RTN4
U2SURP
STX8
CFAP52
MMP28
SUGP2
ARMC6
PPIH
CRCP
NOTCH2NLC
METTL18
C1orf112
ZNF384
HDGF
PPIP5K2
GIN1
ARMC1
DNAJC25-GNG10
DNAJC25
CCDC146
NET1
TUBAL3
FITM2
TEDC1
CRIP1
GOT2
LAMP1
COMMD4
DUT
SRSF11
ZNF92
SLC36A1
LRRC40
MFSD14A
STX11
GTF2F2
SPATA9
RHOBTB3
VSIG8
WASHC2A
STIL
TIPARP
MRPL21
IGHMBP2
ICMT
HES3
FAM172A
HNRNPA1L2
SLC47A1
ARL14
FAM174A
RGS20
ATP6V1H
NARS1
FRG1
M6PR
KLRG1
LEKR1
LMNB2
CCDC112
FAM161A
SGO2
CLSPN
TAF3
PRPF38A
ORC1
NFE2L2
ELF2
RAD52
NDUFAF2
ERCC8
AAR2
ANXA4
RASA1
PTX3
WASHC5
NSMCE2
SMC2
POC5
LRRC73
YIPF3
POLR1C
FBXL3
TIAL1
PDE11A
RBM45
RAPGEF6
MED11
MIGA1
ZMYND15
CXCL16
TRIM23
TRAPPC13
SHLD3
PRSS56
CHRND
TTC27
ACOX3
TEKT2
ADPRS
POLR1F
ADCK1
OLFML2A
NR6A1
IL15RA
LNPEP
ICA1L
HSFX3
EOLA1
NEURL1B
TPRN
TMEM203
NDOR1
DYNC1I2
PLEKHM3
FBF1
ALG10
UQCC1
CAMSAP2
ZNF316
H4C13
H3C11
H2AC16
H1-5
VIPR2
LAMTOR5
POU5F1
TCF19
CCHCR1
NOTCH2NLA
IST1
FBXO48
APLF
ANKRD12
BRF2
PTPN21
PRR14
FBRS
ZNF613
TTF2
YARS1
S100PBP
KIF11
ZNF107
SKP2
LMBRD2
DCAF5
ZNF579
GADD45B
TFB2M
CNST
SYNJ1
OAZ3
MRPL9
HROB
NMNAT1
LZIC
MIS18BP1
RAB41
PDZD11
KIF4A
VIRMA
SIRT6
NECTIN4
SH3GLB1
IQGAP2
TOR4A
RNF223
HAGH
FAHD1
KIF14
EBAG9
TAF5
TYW1
SBDS
CPSF1
SLC39A4
ZNF596
TXNDC16
GPR137C
DSEL
SKA3
MRPL57
ACTR6
GTF3C5
TYW1B
HCN3
CLK2
TEAD1
CCNA2
TMEM262
ZFPL1
CDCA5
DIAPH3
KAT2B
E2F8
KLHL12
SLF1
KIAA0825
CRKL
CDKN1A
DTX2
MEMO1
ALDH3A2
MUC12
LPAR3
CEP55
RBKS
BABAM2
MAD1L1
NUDT1
MRM2
TBC1D16
CCDC40
H4C8
H1-2
H3C3
OSBPL1A
OLFML2B
PCDH8
URB2
TAF5L
LARS2
KIAA0895L
EXOC3L1
E2F4
TCOF1
DPY19L4
PDCD2
TRPC4AP
PAN3
GTF3C6
ALKBH3
CCDC3
KCTD3
ZBED8
PDLIM7
SSNA1
ANAPC2
MRPS14
WDR35
CEP83
GTF3C3
C2orf66
CBWD1
ZCCHC10
NDUFAF6
TROAP
CCNE2
CCDC59
UCHL5
RO60
NCSTN
COPA
ZNF296
GEMIN7
SPR
PIP4P1
OSGEP
APEX1
KAT6A
MAP3K2
STARD6
C18orf54
TYW3
CRYZ
CYSTM1
NEIL3
SF3A3
CDC14B
OPA1
CYCS
FNTB
UBQLN1
COX20
ADAM15
EFR3A
TTC4
DSTYK
PSMD3
CDC73
BICD1
PSMD9
HPD
FBXW8
HINT1
ZNF783
CEP120
VWA8
TNFAIP8L1
KDM3B
NAGPA
ATG14
C8orf33
TMED5
CCDC18
JUND
IQCN
AGL
SLC35E2A
NXPH3
SLC2A12
DHX40
MRPS23
NUDCD3
PEX19
ANKRD40
FBXO4
ANTXR1
SLC12A9
RABL2A
ARHGAP11A-SCG5
ARHGAP11A
SAP30BP
RECQL5
METTL15
KIF18A
FKBP7
PLEKHA3
ADAM19
SASS6
SDAD1
GDAP1
CDKN2C
FAF1
PPP1R12B
UBE2T
MIA3
DARS2
CENPL
NGDN
SDE2
LMNB1
PLAA
IFT74
TMCO1
EBNA1BP2
CFAP57
NCAPH2
LMF2
PIP5K1B
NUP214
WDR46
RGL2
PFDN6
BRCA1
TTLL11
SLC25A51
TRAIP
ZBTB40
PPP1R11
POLR1H
MITD1
RFX3
ATF6
CALCR
VCX3A
OIP5
NUSAP1
STAT3
CDK5RAP1
TBCD
NDUFB8
HIF1AN
RTN2
PPM1N
ACOT6
P2RY1
TMEM171
BUB1
ASH1L
COMMD1
FANK1
WDR55
DND1
NADK2
ADNP
PPP6R1
MTHFD2L
RRAGD
DUSP11
C2orf78
DPYD
TSR3
GNPTG
VPS50
HEPACAM2
H4C3
H1-6
HUS1
LSM2
HSPA1L
HSPA1A
ST6GAL1
ZNF443
URB1
HM13
CENPH
ABCB10
NOTCH2
TACC1
RMI2
BRWD1
PLS1
KCNK5
TIAM1
RNF166
CTU2
SHOX2
MRPL1
PELP1
ARRB2
RSRC1
EXOC5
AP5M1
AJUBA
CRYM
DDX59
HAX1
PMAIP1
EPHA3
KPNA2
TXLNA
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
RPS19
UMAD1
SPC24
PARP2
EMILIN1
KHK
CAPG
SH2D6
AGK
RAB3C
CEP162
UBE3D
DOP1A
DISP2
PHGR1
ZKSCAN8
TRIM52
TMEM9
ALKBH2
UNG
MOK
ATR
SF3B5
THBS3
MTX1
BTF3
FST
SPC25
CRLF3
ATAD5
H4C2
H2AC4
H3C2
COX10
ZMAT2
HARS2
HARS1
ICE2