ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089509 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◣ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
PSMD6
HEATR6
TUBD1
RPS6KB1
TEX14
RAD51C
TTC24
IQGAP3
TRIM37
PFDN4
DYNLRB2
BRIP1
ALKBH2
UNG
NPAS4
BMP7
APPBP2
DUX4
USP32
PARD6B
HIPK1
YPEL2
BCAS4
SGO1
PPM1D
ZNF217
SLC12A9
XRCC2
RNFT1
ARFGEF2
KLHDC4
C3orf14
NCOA3
CREBRF
TMEM262
ZFPL1
CDCA5
BIRC5
FANCI
RNF166
CTU2
MOK
EEF1AKMT3
METTL1
CYP27B1
SKA3
MRPL57
TSFM
FANCD2
PPM1E
POLQ
CYB561D1
ATXN7L2
DHX37
BRI3BP
PHTF1
TRIP13
BRD9
TICRR
BARHL1
SCRT1
DGAT1
TROAP
UTP20
GABARAPL2
ITPRIPL1
NCAPH
SKA2
PRR11
KAT2B
SLC45A3
FBXO5
TTF2
RRP15
CRBN
RAD54B
SMG8
RAB22A
DZIP3
CIP2A
WASHC5
NSMCE2
DCLRE1B
AP4B1
DLGAP5
CSTF1
AURKA
DHX40
NUF2
ATXN7
SUMF1
ZHX3
CPEB4
CCNA2
FAM72C
DCAF4
SRGAP2C
FAM72B
C12orf66
CKAP2L
C16orf46
SIKE1
SMC2
HSDL1
DNAAF1
ZNF331
CCT2
SAP30BP
RECQL5
UBE2C
SRGAP2B
FAM72D
FAM214A
ZEB1
HTR5A
DYRK1B
INTS1
SRGAP2
FAM72A
EPN1
OAZ3
MRPL9
UBE3D
DOP1A
FBXO32
MOCS3
DPM1
SHCBP1
MYL12A
MYL12B
RRP1
ROPN1L
VAPB
FAM240C
HCFC2
GLT8D2
NET1
TUBAL3
TTLL11
FAM207A
BICDL1
KLHL24
RUVBL1
DDX11
POLR2K
SPAG1
HSF1
BOP1
EIF3C
EIF3CL
TRMT61A
CKB
MTMR14
GTF2H3
EIF2B1
HELZ
LOC101928764
KIF14
DNAH7
SPPL2A
LZTS2
TWNK
MRPL43
CEP128
NEIL3
ZFYVE1
ING4
NBPF1
TMOD3
RACGAP1
GNAI3
GPR61
NEMP1
CALCOCO1
ABCA5
ESPL1
NRAS
SPATA25
NEURL2
CTSA
ZSWIM1
EXO1
CS
TRIM33
LYSMD2
KPNA2
SMIM41
ATG101
MIS18A
TBX2
RAD51
IQSEC3
NHP2
SLC27A2
RNF114
MCM7
AP4M1
GPR89B
SEC22A
QSOX2
MCM10
WASHC2A
NDUFV1
AP4E1
PRKAB1
ATP1A1
METTL2A
MRPS23
POLR2J3
ZSCAN2
KLHL36
PRKAR1A
TBC1D30
GNS
PRMT6
CMC2
CENPN
C1orf54
APH1A
POLR3GL
ANKRD34A
LIX1L
KIFC1
CA4
CLPTM1L
VRK1
RRP12
SLC25A24
VARS1
CCDC86
RHNO1
FOXM1
GNA13
BUB1B
RAE1
MTRNR2L3
RRM2
PLK4
THOC7
XKR7
L1CAM
NAA25
FAM227B
DTWD1
AZIN1
NUB1
C20orf27
RNF40
CCDC189
TCTN2
PRPF18
TSEN2
TADA3
ARPC4-TTLL3
ARPC4
MED20
BYSL
GPR89A
CFAP69
ERN1
MKI67
CCNB1
TM9SF1
IPO4
ATG14
RHEBL1
KMT2D
ATP5F1E
SH3BGR
LCA5L
PRELID3B
AP3B2
NME1-NME2
NME1
TTC27
PTPRCAP
RPS6KB2
TPTE
NTAQ1
C8orf33
MAX
CENPBD1
C16orf71
ANKS3
DDX49
COPE
RAD18
FBXO43
TBC1D13
ATP6V1C1
TXLNG
CALCOCO2
KCNJ14
GRWD1
WIPI1
NXF1
ATXN1L
INCENP
CHFR
GPSM2
NOMO3
NOMO1
SNAPC4
MTFR2
PPP2R3B
TRPM7
TP53INP1
GTSE1
PFDN5
MYG1
FAM210B
GTPBP10
PLK1
TOLLIP
MYBL2
MAPK8IP2
MBTPS1
C11orf24
CCT5
ATPSCKMT
TMEM249
SLC52A2
FBXL6
SCFD2
LTV1
TMOD2
FURIN
TAF4B
SLC25A25
NAIF1
DENND2C
IPO11
DIMT1
CPLX2
CFDP1
APRT
CDT1
FOXH1
PPP1R16A
BLM
GFPT1
MED13
SMYD5
ZNF778
POLE3
C9orf43
ALAD
TEX2
NDUFAF6
CCNE2
ZFAND2A
KLF10
MXD4
XPOT
SKA1
NCKAP5L
SLC39A2
METTL17
MLYCD
AURKB
NUDT2
KIF24
DUT
PCNX3
MAP3K11
LATS2
WDR4
SLC25A19
DHODH
PKD1L3
BUB1
CSDE1
TTK
MAD1L1
NUDT1
MRM2
DERL1
TUFT1
KIF18B
DBNDD2
NOL6
TMEM208
LRRC29
PLEKHM3
ZC3H18
NOTCH2NLC
CYB561
ZNF23
SGO2
PDXDC1
ASB8
HAUS7
TRIM45
SRPRB
NKX1-1
POLR2J
ZMAT3
RABL2B
RTF2
GFOD2
PUF60
VANGL1
PREX1
C6orf89
TSEN54
LLGL2
CASKIN2
LARP4
FAM186A
UTP23
SLC35A5
ATG3
PSMD12
WDR74
STX5
MON2
GALK1
CLTC
CDC14B
PSRC1
SPTAN1
ACOX3
SLC37A1
RSPH1
LTO1
GABPB1
HEATR5A
RMDN1
CPNE3
RTKN2
ZNF821
IQCG
LMLN
DBF4B
RPL35A
TOP1
ARSG
SLC16A6
PDP1
PGBD5
LSG1
FIS1
POU5F1
TCF19
CCHCR1
CLDN15
LRPPRC
OSGIN2
SLC27A3
ZBTB9
NCAPG
TRMT44
HSPA5
NAGPA
LZTFL1
PSMA5
PIAS3
QTRT1
NIPSNAP3A
P2RY2
TSR3
GNPTG
RIPK2
RTEL1
SFSWAP
NOTCH2NLA
FRAT1
ESCO2
TFPT
PRPF31
NOTCH2
SUV39H1
KMT5A
BCAS2
DSCC1
CALR
RAD23A
GOLGA3
FARSA
STOML1
PML
DEPDC1B
GFI1B
TSC1
DKC1
SMAGP
MARCHF8
PRCP
DDIAS
SART1
USP54
DCAF7
COTL1
AACS
DUS2
DPEP2NB
DDX28
NUP107
PTPN1
RNF121
LOC100133315
TUBB3
MC1R
FLCN
NEK2
DDX31
GTF3C4
SH3GLB2
MIGA2
LRP10
CACNG4
CIT
CBLB
CCNG2
REXO4
ADAMTS13
MFN1
DYNC2I1
CCDC146
SPEF2
CSRNP2
ANKRD28
RABL2A
ZGLP1
FDX2
ANAPC7
PDSS1
TMEM120B
NBPF15
AP2A1
TSKS
UFD1
CDC45
METTL3
GPD1
COX14
EDC3
KDM5B
USP14
TBC1D31
PTTG1IP
MYO5C
DNASE2
KLF1
GCDH
RAB5B
PMEL
CDK2
NR4A2
GRB2
MFSD14B
SLC25A44
CLCN7
HARBI1
ATG13
ICAM2
PRR29
MYO5A
DDX19A
GLE1
PYCR3
GFUS
HAUS5
STRIP1
EIF2D
CEP55
DIAPH3
SPATA33
CHIC2
PLCG1
ATR
COX6A1
TRIAP1
EEF1E1
NOP9
DHRS1
FITM2
ETFDH
C4orf46
CKAP5
SLC35A2
PIM2
MACROD1
LTB4R2
DMXL2
UTP4
DERPC
CHTF8
ATAD2
SLF2
EXOSC5
BCKDHA
PIGU
SNRPE
PPP1R12B
UBE2T
TMEM109
PRPF19
MRPL2
KLC4
CUL7
PRMT3
CCND3
NEK11
ASTE1
SWI5
GOLGA2
SPG7
POC5
NKIRAS1
NR1D2
FAM117B
COPS3
RFWD3
ZNF622
PCYT1A
GLG1
MRPL28
SYNJ2BP-COX16
SYNJ2BP
CREB3L2
ZNF148
CDK5RAP2
SPATA17
GPATCH2
KLC1
NOC4L
DDX51
SPC25
TMEM71
PHF20L1
SARS1
PKIG
SERINC3
KLHL20
MAPK8IP3
WDR59
DYNLL2
ARMC2
TMEM129
TACC3
SLBP
C12orf45
TACO1
LACTB
TRIM25
CHRNA5
ANKRD42
WDR3
GDAP2
RFC1
CALM1
C8orf76
GATAD2B
WDR46
RGL2
PFDN6
SRD5A1
UBE3B
BBS1
DOLPP1
HPS3
CNTRL
C5
VPS4A
NUMB
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
MAD2L1
ART1
FBXW8
RXYLT1
TPRN
TMEM203
NDOR1
FANK1
POLL
DPCD
PTGFRN
KLHL18
KIF9
TTLL5
ERG28
TOP1MT
ARFGAP1
KCTD13
NMD3
NTNG1
MRPL27
EME1
AP1M1
RUBCN
EIF3B
WWP2
NOB1
SAXO2
EFL1
PIP4K2C
SQLE
DICER1
WWP1
RBM19
MND1
SSNA1
ANAPC2
OXSM
NGLY1
PDCD2L
LRRC37A3
SV2A
CORO1C
SF3B4
MTMR11
SAC3D1
ARNT
NEK10
SUSD6
URB1
PCOTH
MIPEP
C1QTNF9B
INKA2
DDX20
IFT88
RPGR
KATNIP
GTF3C1
CENPB
CDC25B
SPEF1
MFSD5
SETDB1
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
NOP16
HIGD2A
RTTN
ZGRF1
LARP7
MRPS14
VPS45
ZKSCAN8
CARD19
INIP
TRAP1
BCKDHB
AHNAK2
CLBA1
BANP
ERGIC1
WASHC2C
ATP6V0D1
AGRP
LIN28A
AEN
WDR61
SLC35C2
DDX46
TMEM67
SND1
THOC3
KIAA0895L
EXOC3L1
E2F4
SSBP2
CHCHD6
TDRKH
BSPRY
ELMO3
NAP1L1
FAM117A
GSTP1
VAC14
RECQL
GOLT1B
NME2
LSS
SPOP
GTPBP4
FAM180B
NDUFS3
KBTBD4
SLC25A46
SYNGAP1
CUTA
PHF1
ACBD7
RPP38
POLR2G
TAF6L
KYAT1
LRRC8A
TMEM38B
GNG14
FBXW9
MRPS21
VPS9D1
BLOC1S2
TOX4
RAB2B
TMEM258
FEN1
LSM14B
USP8
ABHD4
DAD1
FAM53C
CDC25C
CCDC88A
NAA35
PDE4DIP
TMEM65
HEATR5B
GPATCH11
MCRS1
CENPA
PPM1G
IFT22
RPLP0
GCN1
SEL1L
WDR37
IDI1
ANKRD46
GMFB
IQGAP1
TADA2B
CCDC96
WDR62
THAP8
CCDC150
PDIA4
SPATA2
MARS1
ARHGAP9
TSC2
NTHL1
ARHGAP33
PRKCA
PPIL1
PITPNB
PROX2
AHCYL1
UPF2
GSN
MRPL3
RAB14
USP36
ERAL1
DEPDC1
ANGEL1
TAF11
ANKS1A
APPL2
SECISBP2
CKS2
PBK
CENPW
TDG
C12orf73
COQ2
GOLGB1
C14orf28
UCP2
SLC37A4
TVP23C
VPS33A
CORO1A
SETD4
CBR1
DNA2
PUS7
RINT1
TAMM41
INTS2
LRFN4
MRPS22
SLC25A14
AP5B1
OVOL1
CDK1
HNRNPF
EEF1AKNMT
FBXO33
LRGUK
RAD54L
FAAP24
CEP89
DDX5
POLG2
PPP2R5B
ATG2A
CEP164
EIF2B2
KAT7
CEP112
BACE1
IFT57
PC
EIF3E
MLEC
SPOUT1
ZNF17
ZC3H3
ZGPAT
ARFRP1
ACSF3
SNX27
PPRC1
USP30
TCOF1
WDR70
NUP155
C12orf43
TONSL
METTL18
C1orf112
RCCD1
NOMO2
TPD52L2
DPH7
ABHD16B
ATXN2
STYX
UNK
H3-3B
SIRT7
MAFG
GSTO2
PCYT2
SVOP
PLBD2
GSKIP
ATG2B
NPB
SLC29A3
SLC46A1
ZMYND8
RNASEH1
TEKT2
ADPRS
ANAPC5
NR1H2
HSP90AA1
POLD1
PTPRH
TBK1
WDR20
RASA2
PRRC1
XPNPEP1
SH3BP5
SORT1
SLC29A2
TCP11L2
SF3B2
GAL3ST3
ENTPD5
BBOF1
CNBP
C12orf50
C12orf29
CARMIL3
UTP25
POLR1B
SPCS1
GLT8D1
COMMD4
PSMD9
HPD
ADPGK
ZNHIT1
PLOD3
SH2D3C
CDK9
AMIGO1
ZFR
NOL8
CENPP
BBS5
TMEM231
TXNL4A
RBFA
SPC24
ATG7
ABCC10
ZNF212
CYP2W1
CDIPT
RRP1B
HSF2BP
PEBP1