ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089510 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◣ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

DUX4
TUBD1
RPS6KB1
PSMD6
TRIM37
HEATR6
BRIP1
NPAS4
ARFGEF2
TTC24
IQGAP3
DYNLRB2
BCAS3
SGO1
CNOT3
BCAS4
TEX14
RAD51C
ALKBH2
UNG
USP32
EPN1
APPBP2
PFDN4
ZNF217
SMG8
PPM1D
CRBN
PARD6B
BMP7
NCOA3
HIPK1
FAM240C
C3orf14
SKA3
MRPL57
CREBRF
DZIP3
CIP2A
SRGAP2
FAM72A
DHX40
CCNA2
SRGAP2C
FAM72B
NEMP1
TTLL11
SIKE1
NAGPA
POLQ
ATG14
SUMF1
RRP15
FAM214A
KPNA2
ZNF331
VRK1
MND1
METTL2A
MOCS3
DPM1
FAM72C
SRGAP2B
FAM72D
ITPRIPL1
NCAPH
HTR5A
HSDL1
DNAAF1
ATXN7
ABCA5
MTFR2
MYBL2
CSTF1
AURKA
FBXO5
RNFT1
NBPF11
TICRR
XRCC2
TRIP13
BRD9
YPEL2
LOC101928764
NOL8
CENPP
TROAP
RACGAP1
UBE3B
BIRC5
PTPRN2
RAD54B
TTF2
TSR3
GNPTG
UBE2C
FRG2
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
RAD51
UTP20
KLHDC4
EDC3
RAB22A
TBX2
DYNLL2
DHX37
BRI3BP
SAP30BP
RECQL5
SFSWAP
NKX1-1
RNF166
CTU2
SMC2
EEF1AKMT3
METTL1
CYP27B1
OAZ3
MRPL9
EXO1
NET1
TUBAL3
OS9
MOK
LZTFL1
HEATR3
TRIM33
ART1
FANCD2
TRMT61A
CKB
RUVBL1
DCLRE1B
AP4B1
NDUFAF6
CCNE2
PPM1E
NCAPG
TBK1
RTEL1
COL23A1
SPNS1
LAT
SKA2
PRR11
SCRT1
DGAT1
ARHGEF35
CYB561D1
PHTF1
SMYD5
KAT2B
SLC27A2
TMEM262
ZFPL1
CDCA5
NEIL3
SMIM41
ATG101
UGGT1
MAMDC2
SPATA2
HCFC2
GLT8D2
RHEBL1
KMT2D
C1orf54
APH1A
DUS2
DPEP2NB
DDX28
ATP6V1C1
RPLP0
GCN1
MYL12A
MYL12B
CDC14B
SUV39H1
EIF2D
CENPBD1
WASHC5
NSMCE2
KIFC1
SGO2
RAD18
ZEB1
IQSEC3
ENDOV
TOP1
CLPTM1L
VANGL1
CCT5
ATPSCKMT
SEL1L
PPP1R12B
UBE2T
CPLX2
NUF2
ASPM
CA4
LOC389831
DCAF7
FBXO32
YIF1A
TMEM151A
DSCC1
PKMYT1
NMD3
FANCI
GTF2H3
EIF2B1
UBE3D
DOP1A
VAPB
MED13
PES1
AP4E1
BARHL1
CENPE
MYO5C
SARS1
TONSL
VAC14
C16orf46
SSBP2
ZC3H18
GPR89A
ZFAND2A
RABEPK
TPTE
POLE3
C9orf43
ALAD
RAB41
PDZD11
KIF4A
TBC1D23
BUB1
ARFGAP1
INCENP
CCNB1
PGBD5
MCM10
MFSD4B
UTP18
MBTD1
POLR3GL
ANKRD34A
LIX1L
C12orf66
BLM
DYNC2I1
MRPS23
RAD9A
PPP1CA
OXR1
TSEN54
LLGL2
CASKIN2
WDR74
STX5
IPO11
DIMT1
RIPK2
SLC25A24
DICER1
INKA2
DDX20
DYNC1I2
TMOD3
ARPP19
SUPV3L1
DYRK1B
ZGRF1
LARP7
RRP12
C8orf33
TSEN2
NDUFAB1
KIF18B
TTK
DNA2
INIP
GNA13
OSGIN2
DLGAP5
SPPL2A
TCTN2
ATXN1L
INTS1
PRMT6
CCT2
BUB1B
CMC2
CENPN
RGS14
LMAN2
BICDL1
TOM1L2
DRC3
NHP2
PDIA4
KLHL36
UFD1
CDC45
WDR46
RGL2
PFDN6
TBC1D30
GNS
GFOD2
ANGEL1
SPOP
C8orf76
RRP1
MED20
BYSL
HAUS7
NOTCH2
NBPF15
SNAPC4
PSMD4
GOLGA3
GNAI3
NXF1
GPR61
MFSD5
PTPRCAP
RPS6KB2
DNAJC25-GNG10
DNAJC25
CORO7-PAM16
CORO7
ZHX1-C8orf76
ZHX1
DNAJA3
KLHL24
USP15
TRAFD1
URB1
TTC27
GTSE1
PDCD2
RMDN1
CPNE3
SLC45A3
CSDE1
CCNG2
SLC25A19
PRPF18
FAM76A
DENND2C
LTV1
CDK1
CNBP
ATP5MG
CCSER2
RABL2A
AZIN1
SPEF2
SLC12A9
TRIP4
PCLAF
MFN1
RBM42
AP1G1
TDRD9
ATP5MPL
CUL2
PRKAR1A
MCM7
AP4M1
GLE1
LACTB
UBR7
GON7
MTMR14
RRM2
CKAP2L
DSTYK
RRM2B
ATP6V0D1
AGRP
MAPK8IP2
USP39
C2orf68
L1CAM
RNF181
TMEM150A
MLYCD
UTP23
HASPIN
ASB8
TOMM70
LNP1
KIF11
MAX
FAM207A
FRAT1
SSR3
PUF60
FRG2C
ATP5F1E
NOTCH2NLC
NAA25
NOTCH2NLA
CENPA
PLEKHM3
LEO1
RAE1
MTRNR2L3
H1-10
C14orf28
PHC3
DDX21
CCDC146
VPS50
HEPACAM2
RIDA
POP1
DRD4
WASHC2A
NEK2
SPATA33
GGH
TBC1D15
TMEM87B
GRPEL2
HELZ
MLKL
PHACTR2
NBPF1
DDX49
COPE
ATAD2
TOMM40
GLRX5
CPEB4
WDR53
FBXO45
ZNF530
SPDYE6
LOC100289561
MAPK8IP3
TMEM231
ANKRD42
SPC24
MYBL1
CAPN7
NDUFB5
MRPL47
PRKCA
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
MAD2L1
CORO1A
ZAR1L
BRCA2
RHNO1
FOXM1
POLR2K
CEP128
FBXO43
RFXANK
BORCS8
CHFR
PITPNB
UBALD2
TPRN
TMEM203
NDOR1
USP14
WIPI2
THOC7
ZNF778
MAST1
RTBDN
NRAS
STYXL1
KIF14
SCRN3
CIR1
TCTEX1D2
TMEM258
FEN1
RALBP1
LYSMD2
ZNF688
DNAH7
CLTC
POU5F1
TCF19
CCHCR1
PRELID3B
NOTCH2NLB
AMOTL2
CPLX1
TMEM109
PRPF19
NUP160
FAM8A1
MXD4
ATP1A1
TMEM132A
NBEAL1
KCNH6
SLC22A15
PLK4
CEP55
LTN1
FANCC
UNK
H3-3B
AURKB
ZGLP1
FDX2
EEF1E1
SLC35B1
CHCHD6
SAXO2
EFL1
C16orf71
ANKS3
XKR7
SKA1
SPAG1
NDUFV1
VPS13B
USP54
CANX
FBXO33
UBE2N
NUP214
NUP107
PARPBP
NUP37
DPP8
PIP4K2C
G2E3
SFXN1
TRAIP
CCDC90B
LMTK2
DMXL2
PLCG1
PIP4P2
COX6A1
TRIAP1
ZFYVE1
TTLL4
ESPL1
SRD5A1
TMEM167B
RXYLT1
CMTR2
SARNP
ORMDL2
KIAA0895
ANLN
DNASE2
KLF1
GCDH
DYRK3
KLF10
INVS
ERP44
MAP3K3
SLC25A44
CAMK2G
WIPI1
SLC37A1
RSPH1
ZNF367
ARSG
SNX11
CBX1
TEDC2
SLC16A6
KCNMB4
ITGB4
MTRNR2L2
MSH3
DHFR
KNOP1
IQCK
DDX11
EIF1AD
CST6
BANF1
PPP2R5C
CIT
DNM1L
USP10
MAPKAP1
DENND10
SULF2
ATR
LSM5
AVL9
PTRHD1
CENPO
PLK1
SYNGAP1
METTL2B
CUTA
PHF1
SEC13
CLNS1A
SKP2
LMBRD2
ZNF706
NME1-NME2
NME1
NOP16
HIGD2A
MKI67
DEPDC1B
TAX1BP1
CDIPT
LSM14B
RUBCN
CHD6
UNC79
BTBD7
STMN3
CARS1
CCDC59
FAM117B
WDR77
ATP5PB
MLEC
C20orf27
PSMB7
PITX3
GBF1
PCNX3
MAP3K11
GDPGP1
CIB1
FAM210B
ABL2
POLR1B
GABARAPL2
CHPF2
ABCF2
RTKN2
CEP164
SQLE
SEC22A
KDELR2
UBR5
BACE1
MIS18A
SLF2
FITM2
RFC1
URM1
TMEM127
CIAO1
ECT2
AP3B2
YKT6
FAM13B
ASCC2
BMT2
LCN12
FBXW5
C8G
WDR4
EIF3C
EIF3CL
PRMT2
SPC25
PRDX2
CHD1L
RNASEH2A
NAA35
PRKAB2
EIF3H
ARNT
NAA50
ATP6V1A
HM13
KDM5B
WWP2
NOB1
RIF1
ZNF79
MTPN
LUZP6
GRB2
SDHA
CCDC127
ESCO2
PPRC1
RFC3
DBF4B
MXD1
GPR89B
GLG1
VGLL4
ATP6V1G1
TATDN2
TRIM45
TRUB2
COQ4
ZSWIM9
LIG1
SPTLC1
PIMREG
AIPL1
PDCD2L
MRPL48
ZNF131
RFWD3
OPRL1
FAM185A
RGS19
LKAAEAR1
DIP2C
ACOX3
TRMT44
ANKRD13A
SPG7
GIT2
CSRNP2
TLK2
CIBAR1
ERGIC1
AARS2
ATG5
TMEM9B
HEATR5A
POLD3
NGDN
FOXH1
MRPL39
PPP1R16A
TMED2
CYB561
PREX1
PRKCI
RABL2B
TSFM
MMUT
CENPQ
LAMTOR5
NKIRAS1
WDR37
IDI1
NR1D2
SLC30A5
COPS3
VPS9D1
CHD1
FAM204A
MKRN1
EMC8
COX4I1
STX12
KMT5A
TMOD2
INSM2
SDAD1
FRAT2
BSPRY
RPL7A
MED22
SURF2
SURF1
UBR3
METTL5
CAPN14
EHD3
PLCL1
C6orf89
ASF1B
DDX42
CCDC47
SECISBP2L
ZWILCH
SNAPC5
RPL4
KIAA0895L
NOM1
EXOC3L1
E2F4
POLN
HAUS3
STOML1
PML
PCYT1A
ELMO3
TMEM43
CHCHD4
SUSD6
TMEM208
LRRC29
URB2
TAF5L
CDC37
MAD1L1
NUDT1
MRM2
PEPD
NUB1
SLC35F5
TMEM120B
SEC61B
ALG2
ZNF507
SF3B2
GAL3ST3
OTUB1
CALU
HSBP1
NUDT4B
MED30
GPSM2
LATS2
SLC5A8
RBM19
TMEM186
PMM2
DIAPH3
LZTS2
TWNK
MRPL43
KLHL32
CFDP1
E2F8
RIOK3
NDUFAF4
TFRC
RNF114
GFPT1
DNAAF4
FANCA
EEF2K
RSL24D1
MED9
ESYT2
BCKDHB
MON2
ITGB1
RFX5
SMNDC1
PCMTD2
RYK
BRD4
PDSS1
LTO1
SMARCC1
C7orf26
TPRA1
MCM2
CRY2
PLA2G15
ESRP2
VEZF1
AMZ1
SPTAN1
CENPW
POC5
NPM1
IFT88
LIN9
FH
SPTLC2
IL15RA
TRPM7
DBR1
PPIP5K2
GIN1
KIAA0319
EMC2
PDIA5
NUDT4
S1PR3
C9orf47
HAGH
FAHD1
PBK
ARMC2
PEX3
ADAT2
HSPA5
AMZ2
MBTPS1
PRPF3
MDM1
SOAT1
BRPF1
RAD54L
RPP40
TADA2B
CCDC96
SNX16
PPP2R3B
SKIV2L
NELFE
IQCH
AAGAB
CFAP299
WDR70
NUP155
ZSCAN2
PRC1
NR1H2
POLD1
VKORC1L1
RB1CC1
RMND5B
MLF2
MARVELD3
KIF15
KIAA1143
KCTD9
CDCA2
PNO1
WFDC3
DNTTIP1
EBAG9
CLCC1
EMC9
PARD6A
ACD
VAMP4
RNF31
PSME2
C16orf86
TADA3
ARPC4-TTLL3
ARPC4
FLCN
CCZ1B
ALDH18A1
PDPK1
PI4KB
CEMP1
DIP2B
WWP1
NTNG1
GALNT16
HMGB1
HSPA9
GTPBP6
CNPY3
QSOX2
TFAP4
HSF1
BOP1
GMCL1
ANAPC7
SEC22B
PIGX
CEP19
CNPY2
POFUT2
BIN3
GAN
ABHD4
DAD1
MARCHF6
MCM6
RAB7A
RAB1A
BDH1
ZNF330
ZNF623
PPP2R5E
ERCC3
RASAL2
VAV3
BCAS1
ATMIN
TRMT6
MCM8
TAF13
COG7
RAD51AP1
C12orf4
RPIA
RANGAP1
ZNF408
ARHGAP1
TCOF1
METTL18
C1orf112
ACBD7
RPP38
TM2D3
TRAP1