ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1021223 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◣ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

dco
Chchd3
Sox100B
soti
Ipk1
Cib2
Tpst
CG46311
CG32633
CG32631
CG11816
Mef2
Sox21a
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
CkIIalpha-i3
CG13896
CG13895
Ppr-Y
RapGAP1
mtSSB
CG6126
CG31287
sbr
Imp
CG15210
CG15209
CARPB
CG1354
dar1
CG14974
CG10359
CG10357
bcd
Ama
zen
CG43980
ush
shop
htk
CG43693
CG7888
Tak1
CG42579
unc-5
Hr51
nej
btd
CG8119
CG8117
snu
Sid
CG33346
CG34165
CG15282
CG3358
CG15919
CG15615
Fmr1
Wnt4
InR
CG34268
CG34267
EcR
Jupiter
CG6808
CG14711
CG14710
CG12007
bor
asun
Mst89B
wgn
sick
CG10481
Prm
Fhos
CG6576
CG13306
RpLP2
CG8311
CG8306
CG8303
CG5089
Reg-2
CG13893
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
Oaz
phyl
Ptpmeg2
CG3106
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
CG13280
CG13272
mdy
Cse1
gol
CG7956
Su(var)2-HP2
Sec61beta
Had2
CG12863
HisRS
Ggt-1
CG6470
Bx
CG6481
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
Socs16D
CG12986
Pde8
retn
Mst36Fb
CG43339
CG43338
ORY
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
TfAP-2
Ldh
CG10163
Best2
Syn2
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
Eip75B
CAH15
otp
Rx
Npc2b
CG9920
CCHa1
CG31191
Atpalpha
CG16898
mRpS18B
Kua
CG13970
Gsc
CG13689
CG44439
CG30369
CG2291
CG14760
CG14759
CG33226
CG30287
CG30286
CG30283
Cda5
galectin
dbr
CG11374
Spn
CG32295
CG2016
CG1124
nxf4
CG43290
CG31496
Gr89a
Decay
Cad89D
CG42342
CadN
CG31275
lace
Rubicon
CAH3
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
shot
DJ-1alpha
RpS28a
Mgat2
CG7920
Axn
CG10365
nau
CG10232
ham
CG42354
CG42353
Fancm
pkaap
crp
Cyp303a1
CG17329
CG13258
GABA-B-R3
Eaat2
CG46301
upd2
Rrp46
Irp-1B
CG6345
CG6325
mRpS33
ema
CG17565
CG14881
CG31279
bowl
bark
CG31960
Svil
CG16762
Indy
CG8945
CG4955
wcy
CG4949
CG43077
PDZ-GEF
mof
Usp30
CG16721
Tsp68C
Hml
CG8757
CG8750
CG43184
Abd-B
VhaM9.7-d
Actn3
pdgy
eag
CG9030
sens
flr
CG10222
kirre
N
Ndae1
CG31909
CG13786
CG5568
CG18586
nol
NaPi-III
CG32074
Sod1
mRpL2
Ufd1-like
FoxK
Dys
CG15025
Pde1c
crol
CycY
Sr-CII
RpS11
CG8858
Ubr1
CG12009
CG12017
CG42700
Cam
piwi
TTLL4A
CG12253
SCAR
ATPsynG
mtd
Tim17b1
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
stl
blw
CycB
CG42260
CG30271
velo
Ist1
CG8549
dikar
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
sim
CG43063
timeout
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
Obp99d
Dup99B
lectin-28C
TwdlE
CG14535
CG9171
obst-E
Cyp12d1-d
BBS4
CG13229
stg
SP1029
CG45544
CG31445
CHES-1-like
CG15478
prage
Adar
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
Neu2
CG7519
CG7202
croc
siz
Edg91
CG34281
CG14329
CG14327
CG14326
CG14324
CG14323
AttD
CG14325
Nc73EF
Cpr73D
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
CG9380
EbpII
Ebp
fal
Gbs-76A
lectin-46Cb
lectin-46Ca
CG34033
CG1648
dila
CG30001
out
PGRP-LC
PGRP-LA
raskol
CG7794
DNaseII
CG7785
Shmt
CG3726
CG12236
CG4020
Act5C
CG9896
CG13192
Mtpalpha
jp
brwl
gcm
CG31709
zip
uzip
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
RagA-B
CG11970
CAHbeta
CD98hc
Sfp84E
Os-C
Lasp
Dab
CG9692
CG43954
Cyp12e1
CG46270
cmpy
CG34260
Zasp52
CG33465
SNF4Agamma
galla-2
OXA1L
CG6418
CG6409
Blos4
Cpr100A
CG15546
CG15545
for
Drgx
LanB2
CG3335
tbrd-1
TfIIA-S
Pli
par-1
CG14762
Odc2
Odc1
CG6118
Act88F
Scp2
CG14903
CG14891
abd-A
mthl14
E(bx)
CG31324
CG6142
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
CG9777
mthl1
SNRPG
RpS19a
Rok
Myd88
CG42346
CG4593
CG3032
cm
CG42308
CG32736
muc
CG5958
Prat2
retm
frj
Rchy1
CG9527
CG43332
CG33557
CG2990
Cht6
ome
CG4914
CG43121
CG9220
Alp11
Toll-7
Cyp308a1
CG32264
CG3556
viaf
Pop2
Grip163
CG6928
Cpr76Bc
Cpr76Bb
Cpr76Ba
CG15429
Atet
CG34435
CG34434
RhoGAP5A
Pop1
Mlc-c
CG32461
Tlk
Rala
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
ftz-f1
CG9743
RpS7
CecC
CecB
CecA2
CecA1
Anp
Smyd5
Oga
Nelf-A
CG5862
CG3337
nerfin-2
CG33784
Alp13
CG33783
CG42749
slbo
bs
Lk
CG34039
CG42758
RpS21
CG3117
CG3104
CG2991
CG2983
CG7509
CG18808
FucTA
Pex3
Pdi
CG32147
CG12316
Men
CG1077
Osi1
Usp47
DnaJ-1
stc
CG15269
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
qvr
E(Pc)
Tsp
cort
Nse1
Nhe3
CG11327
pzg
ppl
Cpr78Cb
Cpr78Ca
CG12974
AcCoAS
HnRNP-K
CG12617
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
CG12730
CG13962
Lst
Cdk4
sm
CG43277
CG42753
CG18367
CG15124
CG1688
ms(3)K81
SPARC
Rb97D
CG5500
ball
Lerp
IntS12
His2Av
unk
VhaAC39-2
CG13829
Irk1
larp
Or98b
Moca-cyp
Gfat2
AP-2alpha
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
CG42327
CG14715
wdp
Gp150
dnt
CG13086
CG17349
fra
CG8818
CG8569
CG33632
achi
CG13151
Rbfox1
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
fax
TMS1
GluRS-m
TyrRS
CG33158
ncm
RpS26
CG31036
CG15517
CG15515
CG31038
Rlip
CG5697
CG17278
cpo
Rim
CG43445
CG6184
CG6195
CG31220
CG31219
subdued
Vha13
Nup58
CG9497
CG9498
ppk7
ppk14
CG9500
Mes2
Pez
Cpr
CG42268
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
Prp31
Msh6
CG7011
CG6878
CG34253
CG44004
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
tapas
MED8
CG8929
ninaA
dbe
aru
PNUTS
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
TotX
Grik
hdly
ex
tkv
Cyp4ac3
Bub1
Bsg25D
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
CG9988
CG10011
CG14062
CG14186
CG14185
sNPF-R
MBD-R2
CG4115
CG10041
CG10038
CG44956
eya
Egm
CG9005
fl(2)d
CG6329
CG13339
CG6347
CG6337
Sytalpha
mthl2
TM9SF3
Eaf6
CG10591
Srpk79D
Csp
CG11523
Rich
Ddx1
Oli
CG6870
Spn28Db
Spn28Da
SmE
CG7102
CG34132
CG2199
Ptp61F
312
mdlc
CG4390
CG17193
Pex7
CG13305
Arr2
mud
mRNA-cap
Fbxl4
CG32599
CG1434
shep
CG43233
CG31683
CG18858
Cdc23
CG2493
CG14270
CG12206
CG10804
CG10803
CG10802
beat-IIIc
Ca-beta
Vm32E
CG4788
tara
Eglp4
Eglp2
Eglp3
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
CG33927
dnc
cnn
cbs
CG30062
RpL37a
glu
LSm7
ChLD3
BuGZ
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
Wdr62
CG31663
CG15358
CG7763
CG34054
CG30026
Smyd4-3
obe
Trissin
CG5213
Tao
CG14219
CG14205
CG14218
CG14204
tzn
Spc105R
Six4
CG3698
ver
nst
eIF2beta
Tsf2
Pmm2
Gcn5
CG34242
fiz
Eo
CG14406
CG12398
CG9512
CG4991
CG16700
Hsp70Ba
CG5608
CG5961
CG12267
Eh
CG14331
CG14330
RpI135
CG4213
azot
CG30378
rnh1
drosha
PIG-X
CG8728
CG34431
CG34430
CG30380
CG30379
chif
CaBP1
CG4455
CG42231
CG44405
CG42266
Chs2
CG7458
kl-5
CG42784
CG3638
CG11403
Got1
CysRS
CG30094
Kank
Lap1
CG12853
ADPS
CG10257
Loxl1
CG11334
CG11333
Asator
CG46468
Lmpt
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
CG42853
CheB93b
CheB93a
Ugt49B2
CG7907
inv
Rsph3
Mbs
Diap1
CG6330
Spag1
Tsp97E
Gr97a
Gycbeta100B
CG15556
CG15554
mthl8
GNBP2
Capr
CG42495
GNBP1
RSG7
CG13003
rdgC
CG32228
sigmar
l(2)dtl
CG5504
Alg3
Sesn
CG46429
CG18128
CG32170
CG1902
CG30339
GstT2
GstT1
CG12926
PK1-R
CG12402
Mp
SIFaR
caps
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
CG7065
scyl
waw
bbx
Sep1
CG15130
CG10949
Arpc2
CG10947
CG8301
CG33654
CG16789
CG9399
CG9396
CG16790
Son
Kap-alpha3
CG12502
dpr20
Dci
CG9593
alpha-Man-IIb
GCS2alpha
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
CG9018
ACXD
Oseg2
CG32301