ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX287743 | 14-16h embryos
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◣ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Ppr-Y
CG12502
dpr20
Dci
Shmt
CG3726
CG12236
CG4020
Act5C
CARPB
CG1354
Rubicon
CAH3
N
kirre
RpL37a
prage
Adar
Socs16D
CG12986
CG6398
wgn
Ptpmeg2
CG3106
RSG7
CG13003
raskol
CG42346
Ten-a
Usp7
Cyp318a1
Cyp311a1
RpS28b
l(1)G0320
CG32700
CG15317
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
Rbfox1
dnc
ftz-f1
stl
CycB
CG42260
blw
CG30271
sbr
Imp
CG15210
CG15209
Tpst
CG46311
CG32633
CG32631
CG11816
Tsp68C
Hml
CG8757
CG8750
CG43184
CG8945
CG4955
CG4991
CG16700
stc
CG15269
CG43332
wcy
CG4949
CG43077
CG14270
CG12206
CG10804
CG10803
CG10802
Dys
CG15025
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
unc-5
Hr51
CG13465
BobA
Usp30
mof
CG16721
TwdlE
lectin-28C
CG14535
Spn28Db
Spn28Da
SmE
CG7102
CG34132
GAA1
shot
DJ-1alpha
sens
flr
CG10222
viaf
Pop2
Grip163
CG6928
sick
CG13962
fiz
Eo
CG14406
CG12398
Flo2
CG32591
CG9503
TfAP-2
pan
Rpn12R
ind
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
Lcp65Ag3
l(3)mbn
Cpr65Au
Lcp65Ag2
Lcp65Ag1
Toll-7
Oatp30B
Cpr30B
CG17855
CG13114
CG13113
CG31275
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
LanB2
CG3335
stg
SP1029
CG45544
CG31445
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
beat-IIIc
RpS28a
Mgat2
CG7920
Axn
RpS26
ncm
cmpy
CG34260
Gsc
CG13689
HnRNP-K
Pde1c
CycY
crol
shop
htk
CG12007
Tak1
CG42579
CHES-1-like
CG15478
Pde8
retn
SP1173
TotX
Grik
hdly
CG8119
CG8117
CG16898
Neu2
CG7519
CG7202
croc
Wdr62
CG31663
CG15358
PIG-K
east
CG13280
CG13272
mdy
Cse1
CG5890
CG5886
CG14545
HisRS
Ggt-1
CG6470
Bx
CG6481
Zpr1
Ost48
His3.3B
fh
Dlip1
CG9034
CG44532
Bap111
CG7065
Abd-B
bcd
Ama
zen
insv
Elba2
ND-B17.2
Arpc5
Drp1
CG15394
Snp
CG44249
CG13501
CG13500
Npc2b
CG9920
CCHa1
PK1-R
CG12402
Cpr100A
CG15546
CG15545
Nc73EF
Cpr73D
Tsp
Nse1
Nhe3
cort
CG11327
tapas
MED8
CG8929
Fancm
CG3556
tkv
Cyp4ac3
Bub1
Bsg25D
CG1077
Osi1
CG44439
CG30369
CG2291
CG14760
CG14759
CG33557
CG2990
Cht6
CG12782
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
CG42700
Cam
GlyP
CG4259
CG14186
CG14185
sNPF-R
Eh
CG14331
CG14330
PDZ-GEF
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
CG31145
CG3358
Mp
CG42327
CG14715
Trissin
obe
CG5213
Rh6
Cyp12e1
CG46270
Ldh
CG10163
Best2
fra
CG8818
CG8569
CG33632
CG13151
achi
CD98hc
Sfp84E
Os-C
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
dco
Chchd3
Sox100B
RagA-B
CG11970
CAHbeta
Esyt2
AP-2alpha
RpLP1
ebi
CG13692
CG13690
CG11885
BBS8
ex
sit
CG33110
FucTA
Pex3
Pdi
CG32147
CG12316
Fmr1
Spn
CG32295
Timp
RpLP2
CG8311
CG8306
CG8303
CG5089
Scp2
CG14903
CG14891
Lmpt
CG32170
vnc
Dronc
dpr6
CG6685
CG6674
CG42455
CG2841
Raf
mRpL14
Ilp6
GCS2alpha
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
snu
Sid
CG33346
CG43055
Mef2
CG9018
ACXD
Oseg2
CG32301
out
siz
CG15919
CG15615
CG13192
CG43693
Got1
CysRS
CG30094
CG7794
DNaseII
CG7785
CG6184
CG6195
CG31220
CG31219
Vha13
subdued
Nup58
RpS21
CG3117
CG3104
CG2991
CG2983
Lasp
Dab
CG9692
CG43954
CG18557
dnt
CG13086
CG17349
Patj
JTBR
dlt
CG42676
CG12020
Cdc37
alpha-Spec
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
GNBP2
CG42495
Capr
GNBP1
CG9497
Ca-beta
Vm32E
CG4788
Pez
Cpr
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
Su(var)2-HP2
Sec61beta
Had2
CG12863
Gycbeta100B
CG15556
CG15554
Ipk1
Cib2
CG9380
EbpII
Ebp
Cpr76Bc
Cpr76Bb
Cpr76Ba
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
Thor
Pgant4
Pif1
ND-PDSW
msl-2
CG31776
VhaM9.7-d
Actn3
Gr89a
Decay
CG42342
Cad89D
CG3781
Spx
Rbcn-3A
Ndae1
CG31909
CG13786
Eglp4
Eglp2
Eglp3
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
qvr
E(Pc)
pzg
ppl
Cpr78Cb
Cpr78Ca
CG12974
AcCoAS
mRpS33
ema
CG17565
CG14881
CG31279
SPARC
Rb97D
ms(3)K81
CG5500
Lerp
IntS12
His2Av
ball
SIFaR
CG17032
Pka-C3
GXIVsPLA2
elgi
Sox21a
LSm7
glu
ChLD3
BuGZ
CG8180
flz
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
Kank
Lap1
CG12853
ADPS
CG10257
ssp6
CG6610
CG13295
CG13293
CG9593
alpha-Man-IIb
nsl1
ham
Smyd5
Oga
Nelf-A
CG5862
CG3337
CG2750
CG11356
mthl14
E(bx)
CG43980
cpo
Rim
CG43445
CG15373
CG10365
nau
CG10232
CG9777
SNRPG
RpS19a
Rok
mthl1
RpIIIC53
mus304
mRpS26
CG7341
CG32195
CG13698
CG42853
slbo
bs
caps
CASK
Gr93a
CG8301
CG33654
CG16789
CG9399
CG9396
CG16790
Son
Kap-alpha3
nej
btd
hwt
CG42784
CG9705
CG13025
Nrt
Myd88
TTLL4A
piwi
CG12253
SCAR
ATPsynG
InR
shep
RpS2
mtDNA-helicase
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
PGRP-LC
PGRP-LA
Lst
Cdk4
GABA-B-R3
Eaat2
Prp31
Msh6
CG7011
CG6878
Vsx2
Or67d
can
Gr59d
CG13538
RpL37b
Gr59c
CG42703
CG9876
soti
CG33226
CG30287
CG30286
CG30283
CG31191
Atpalpha
sced
Opbp
geminin
Dpit47
Adf1
CG9410
CG15908
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
CG14459
Loxl1
CG11334
CG11333
Srpk79D
Csp
CG11523
Rich
Ddx1
CG3638
CG11403
Act57B
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
tzn
Spc105R
Six4
CG3698
Jupiter
CG6808
CG14711
CG14710
sm
CG43277
CG42753
CG18367
CG15124
dila
CG30001
Gmap
CG6340
CG34106
CG31784
beat-IIIa
Hk
Osi7
Osi9
Osi8
Osi10a
Ref1
Dpck
CG1943
Ufl1
CG1965
CG1105
nerfin-2
CG33784
Alp13
CG33783
SNF4Agamma
TwdlC
RYa-R
CG31076
CG31075
CG14253
CG31077
mud
mRNA-cap
Fbxl4
CG32599
CG1434
mRpL55
CG6040
cdi
ATPsynD
fz3
CG16989
CG13360
tw
Ubr1
zip
uzip
RpI135
CG4213
CG9498
ppk7
ppk14
CG9500
nxf4
CG43290
CG31496
Gr58c
Gr58b
CG9304
CG34029
Gr58a
Mipp1
CG43206
CG4229
ppk9
Pax
CG13085
Alp12
Lectin-galC1
lectin-37Db
lectin-37Da
Rrp46
Irp-1B
CG6345
CG6325
Asator
Egm
CG9005
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
elav
CG4293
Appl
TfIIA-S
tbrd-1
Pli
velo
Ist1
CG8549
dikar
Rsph3
Pcf11
Cyp6a23
Cyp6a22
Cyp6a19
Cyp6a17
Cyp6a9
shd
HGTX
sim
CG43063
timeout
Vago
CG2076
sev
waw
Sep1
bbx
retm
Rchy1
frj
CG9527
ome
CG4914
CG43121
par-1
mdlc
CG4390
CG17193
ND-15
CG4822
CG13694
Gs1
CG3164
CG14762
Odc2
Odc1
pkaap
Cyp303a1
crp
CG17329
CG13258
CkIIalpha-i3
CG13896
CG13895
CG7956
Mst36Fb
CG43339
CG43338
Yip1d1
Vha68-1
Tor
RapGAP1
Mtpalpha
jp
brwl
CG46468
MBD-R2
CG4115
CG10041
CG10038
CG44956
Chs2
CG7458
tou
Ttd14
slim
CG5189
CG30120
Prp19
rswl
CG17669
CG30378
azot
rnh1
PIG-X
drosha
CG8728
CG34431
CG34430
CG30380
CG30379
CAH15
otp
Rx
Sr-CII
RpS11
CG8858
gcm
CG31709
meso18E
CG12531
larp
Or98b
Moca-cyp
Gfat2
CrebB
CG6123
CG6106
sol
peng
dar1
CG14974
CG10359
CG10357
Gr98d
Gr98c
Gr98b
Cyp12d1-d
BBS4
CG13229
tow
CG14820
nuf
CG7924
CG7906
CG34244
Svil
CG16762
cher
Rlip
CG5697
CG17278
alpha-Man-Ia
Gip
CG43740
CG2909
CG15306
rg
CG32767
CG15465
CG14082
Spn75F
Syn2
CG6163
Wnt4
Dll
CG42851
Or67c
CG15429
Atet
gol
CG12730
CG10562
CG10560
CG10553
CG31436
CG31099
CG31087
CG10559
CG10550
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
cnn
CG30062
cbs
Sytalpha
Oli
CG6870
CG6688
CG34375
CG15040
CG9164
acj6
Nepl16
CG34027
CG45095
TTLL5
CG31510
ush
Ppi1
CG45073
Tpi
CG31029
CG34165
CG15282
wts
dj-1beta
cindr
Eip75B
CG9512
tws
knk
gammaSnap2
ATPsynepsilonL
CG31698
CG15404
CG15130
CG10949
Arpc2
CG10947
CG9988
CG10011
CG14062
ninaA
PNUTS
dbe
aru
CG15631
CG31324
CG6142
Nlg3
abd-A
pdgy
eag
CG9030
Gbs-76A
fal
CG4603
CG4597
CG15213
CG15212
Sfp26Ad
Gpdh1
CG9044
Vm26Ac
Vm26Ab