ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX191914 | S2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◣ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Rbfox1
CadN
dnc
sbr
Imp
CG15210
CG15209
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
CG8119
CG8117
Hk
Eh
CG14331
CG14330
shot
DJ-1alpha
cmpy
CG34260
Socs16D
CG12986
nej
btd
CG42346
Abd-B
Asator
sick
CG10481
CG8945
CG4955
wcy
CG4949
CG43077
eya
abd-A
Lmpt
CG32170
raskol
CHES-1-like
CG15478
Tak1
CG42579
PCB
Ntmt
CG46338
CG30010
Lime
CG12744
CG31275
CG5890
CG5886
CG14545
CARPB
CG1354
NtR
GM130
CG34205
a
gom
CG11269
Gycbeta100B
CG15556
CG15554
bcd
Ama
zen
RagA-B
CG11970
CAHbeta
Wnt4
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
Ptpmeg2
CG3106
Usp47
DnaJ-1
CG9171
obst-E
Spn28Db
Spn28Da
SmE
CG7102
CG34132
Ubr1
CG13465
BobA
TfAP-2
CG42700
Cam
viaf
Pop2
Grip163
CG6928
CG6118
Act88F
CG12007
beat-IIIc
Fs
scb
Vsx2
SIFaR
SNF4Agamma
CG13280
CG13272
mdy
Cse1
CG14417
CG14416
Tlk
Rala
dnt
CG13086
CG17349
Gr89a
Decay
Cad89D
CG42342
scrib
plum
Svil
CG16762
CG9777
mthl1
SNRPG
RpS19a
Rok
RapGAP1
mof
Usp30
CG16721
Dys
CG15025
CG4593
CG3032
cm
CG42308
CG32736
siz
prage
Adar
kirre
N
hwt
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG15429
Atet
CG1688
lace
CSN3
CG3288
CG13255
CG11456
Men
Tsp68C
Hml
CG8757
CG8750
CG43184
CG14270
CG12206
CG10804
CG10803
CG10802
mRpS33
ema
CG17565
CG14881
CG31279
Esyt2
Prm
Fhos
CG6576
CG13306
wdp
Gp150
CD98hc
Sfp84E
Os-C
MBD-R2
CG4115
CG10041
CG10038
CG44956
Sox21a
Neu2
CG7519
CG7202
croc
cpo
Rim
CG43445
Tpst
CG46311
CG32633
CG32631
CG11816
CG14186
CG14185
sNPF-R
Scp2
CG14903
CG14891
RpL37a
tzn
Spc105R
Six4
CG3698
Rubicon
CAH3
Shmt
CG3726
CG12236
CG4020
Act5C
Nc73EF
Cpr73D
CG3638
CG11403
lectin-28C
TwdlE
CG14535
CG15919
CG15615
CG42749
CG4991
CG16700
CG5819
CG43980
Rlip
CG5697
CG17278
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
CG6163
CG8180
Wdr62
zip
uzip
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
ftz-f1
CG43693
CG7888
Fancm
ome
CG4914
CG43121
Indy
Spn
CG32295
stl
blw
CycB
CG42260
CG30271
goe
Twdlalpha
TwdlZ
CG32568
mthl14
E(bx)
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
nerfin-2
CG33784
Alp13
CG33783
stc
CG15269
GNBP2
Capr
CG42495
GNBP1
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
CG42853
kra
asl
SecS
Rga
Atu
Ndae1
CG31909
CG13786
Hers
amn
Ca-beta
Vm32E
CG4788
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
CG31826
CG43760
CG18109
nol
NaPi-III
CG32074
CG9497
Sod1
mRpL2
Ufd1-like
FoxK
CG9498
ppk7
ppk14
CG9500
glu
LSm7
ChLD3
BuGZ
VhaM9.7-d
Actn3
tx
CG6503
CG34291
dar1
CG14974
CG10359
CG10357
mdlc
CG4390
east
PIG-K
sr
betaTub60D
ham
RpS21
CG3117
CG3104
CG2991
CG2983
Mp
CG14762
Odc2
Odc1
larp
Or98b
Moca-cyp
Gfat2
CG42327
CG14715
wgn
CG33226
CG30287
CG30286
CG30283
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
CG13192
Sr-CII
RpS11
CG8858
Syn2
trio
CG9205
Ldh
CG10163
Best2
shep
Gsc
CG13689
scyl
Or67d
can
fz3
CG16989
CG13360
tw
fra
CG8818
CG8569
CG33632
achi
CG13151
mud
mRNA-cap
Fbxl4
CG32599
CG1434
CG1902
CG30339
GstT2
GstT1
CG12926
tow
CG14820
Tsp
cort
Nse1
Nhe3
CG11327
for
Drgx
RpS15Aa
Jafrac1
IP3K2
CG15747
fl(2)d
CG6329
CG13339
CG6347
CG6337
Idh3a
CoRest
CG12231
Cpr100A
CG15546
CG15545
flz
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
pav
ImpL2
CG14997
CG1077
Osi1
Cyp12e1
CG46270
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Npc2b
CG9920
CCHa1
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
galla-2
OXA1L
CG6418
CG6409
Blos4
PK1-R
CG12402
Calx
CG43446
tna
PDZ-GEF
sens
flr
CG10222
AP-2alpha
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
ex
CG6184
CG6195
CG31220
CG31219
subdued
Vha13
Nup58
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
Gr59d
CG13538
RpL37b
Gr59c
CG42703
CG9876
Pde1c
crol
CycY
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
CG3355
wts
dj-1beta
cindr
obe
Trissin
CG5213
spel1
mTTF
l(2)34Fd
l(2)34Fc
Send2
Rab14
Pgant35A
CG43052
Mtpalpha
jp
brwl
CG46468
CG9018
ACXD
Oseg2
CG32301
snu
Sid
CG33346
pzg
ppl
Cpr78Cb
Cpr78Ca
CG12974
AcCoAS
CG31324
CG6142
Cyp12d1-d
BBS4
CG13229
fal
Gbs-76A
dco
Chchd3
Sox100B
Rpn13
Cp1
CG42806
PheRS-m
St4
CG18568
CG5906
Sprn
CCDC151
soti
CG7509
CG18808
zda
CheA56a
CG30122
Toll-7
RpLP2
CG8311
CG8306
CG8303
CG5089
Myd88
CG43055
slbo
bs
Egm
CG9005
CG9705
CG13025
Nrt
Sox102F
fd102C
bun
CG2199
Ptp61F
312
lz
c11.1
mRpS18B
Kua
CG13970
Prp31
Msh6
CG7011
CG6878
InR
chif
CaBP1
CG4455
CG42231
CG44405
CG42266
axo
RhoGEF64C
CG7514
CG18418
CG15876
CG13713
CG3868
CG10139
Adgf-E
slim
Ttd14
CG5189
CG30120
Prp19
rswl
CG17669
tkv
Cyp4ac3
Bub1
Bsg25D
Aps
mthl2
TM9SF3
Eaf6
CG10591
CG3358
LanB2
CG3335
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
GlyP
CG4259
CG13962
Pde8
retn
Pex7
CG13305
Arr2
TotX
Grik
hdly
velo
Ist1
CG8549
dikar
Rsph3
CG32117
CG12520
CG14118
caps
par-1
insv
Elba2
ND-B17.2
Arpc5
Drp1
CG15394
Mipp1
CG43206
CG4229
CG33927
CG34165
CG15282
sky
RPA2
Mtp
CG9272
CG43739
CG14383
Paip2
CG7381
CG7091
CG31342
CG10365
nau
CG10232
Pez
Cpr
ms(3)K81
SPARC
Rb97D
CG5500
ball
Lerp
IntS12
His2Av
Eglp4
Eglp2
Eglp3
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
Mef2
ncm
RpS26
CG3556
HnRNP-K
Smyd5
Oga
Nelf-A
CG5862
CG3337
CG4161
sm
CG43277
CG42753
CG18367
CG15124
Pax
CG13085
Alp12
lectin-37Db
lectin-37Da
Lectin-galC1
RtcB
Rab9
Usp10
CG13907
qvr
E(Pc)
CG43919
CG30076
CG5897
Cpr76Bc
Cpr76Bb
Cpr76Ba
DCX-EMAP
CG34253
CG44004
HisRS
Ggt-1
CG6470
Bx
CG6481
PGRP-LC
PGRP-LA
beta3GalTII
Vps25
Gle1
CG8635
Cirl
CG8642
Sytalpha
Oli
CG6870
Gmap
CG6340
CG3781
Spx
Rbcn-3A
nxf4
CG43290
CG31496
RpI135
CG4213
Gr58c
Gr58b
CG9304
CG34029
Gr58a
ppk9
unk
VhaAC39-2
CG13829
Irk1
CG46310
ND-39
ZnT77C
CG5078
CG32425
CG18281
CG17637
l(1)G0320
RpS28b
CG32700
CG15317
GCS2alpha
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
Dscam1
su(f)
CG17169
CG17168
CG17163
CG17162
CG17159
ssp6
CG6610
CG13295
CG13293
CG14947
prd
Pex19
CG2016
CG1124
CG12730
waw
bbx
Sep1
Act57B
Or67c
Lst
Cdk4
pHCl-1
pont
Sirt6
Nuak1
CG43332
Srpk79D
Csp
CG11523
Rich
Ddx1
CG33557
CG2990
Cht6
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
pkaap
crp
Cyp303a1
CG17329
CG13258
CG31663
CG15358
CG17193
Lasp
Dab
CG9692
CG43954
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
azot
CG30378
rnh1
drosha
PIG-X
CG8728
CG34431
CG34430
CG30380
CG30379
CG14082
Spn75F
vig
vas
solo
TfIIS
CG33679
ck
CG44437
sno
REG
Cpsf6
CG43059
CG34462
CG34461
CG13670
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
CG15040
unc-5
Hr51
piwi
TTLL4A
CG12253
SCAR
ATPsynG
Su(var)2-HP2
Sec61beta
Had2
CG12863
tbrd-1
TfIIA-S
Pli
ND-75
CG1632
sni
Trxr-1
sit
CG33110
CG43133
ari-1
CG43229
Eip75B
meso18E
CG12531
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
Eip74EF
Ipk1
Cib2
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
Panx
CG9485
CG33655
CG30394
Lk
CG34039
CG42758
Loxl1
CG11334
CG11333
elav
CG4293
Appl
Timp
HIP-R
CG34134
CG13481
CG46301
sol
peng
fz2
mRRF1
UGP
Pdxk
CG34456
CG32039
PGRP-LF
CG32040
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
CG7065
rpr
CG9380
EbpII
Ebp
Ptpmeg
mthl10