ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100250 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◣ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Rbfox1
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
Wnt4
nerfin-2
CG33784
Alp13
CG33783
Spn28Db
Spn28Da
SmE
CG7102
CG34132
Mtpalpha
jp
brwl
gcm
CG31709
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
cmpy
CG34260
CG9171
obst-E
Gycbeta100B
CG15556
CG15554
CG13465
BobA
Lmpt
CG32170
lectin-28C
TwdlE
CG14535
abd-A
siz
CG31275
Rlip
CG5697
CG17278
Ca-beta
Vm32E
CG4788
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
Abd-B
MBD-R2
CG4115
CG10041
CG10038
CG44956
dnc
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
beat-IIIc
CG32461
Spn
CG32295
dnt
CG13086
CG17349
CG11664
CG14634
TfAP-2
CG43055
lectin-46Cb
lectin-46Ca
CG34033
CG1648
mthl14
E(bx)
CG1688
Cpr100A
CG15546
CG15545
mRpS33
ema
CG17565
CG14881
CG31279
CD98hc
Sfp84E
Os-C
TotX
Grik
hdly
larp
Or98b
Moca-cyp
Gfat2
viaf
Pop2
Grip163
CG6928
CG6118
Act88F
CG1077
Osi1
Syn2
CG42346
CG12009
CG12017
lace
Calx
CG43446
CG9497
CG9498
ppk7
ppk14
CG9500
Cyp12e1
CG46270
shot
DJ-1alpha
Hk
CG13280
CG13272
mdy
Cse1
CHES-1-like
CG15478
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
Mp
Neu2
CG7519
CG7202
croc
CG5906
Sprn
CCDC151
Usp47
DnaJ-1
scyl
CG16898
Oaz
phyl
prage
Adar
GlyP
CG4259
CG10365
nau
CG10232
mof
Usp30
CG16721
Nc73EF
Cpr73D
CadN
PGRP-LC
PGRP-LA
bcd
Ama
zen
stl
blw
CycB
CG42260
CG30271
CG14762
Odc2
Odc1
ome
CG4914
CG43121
Cyp308a1
CG42327
CG14715
Su(var)2-HP2
Sec61beta
Had2
CG12863
Indy
ftz-f1
Egm
CG9005
CG15919
CG15615
Ldh
CG10163
Best2
sm
CG43277
CG42753
CG18367
CG15124
CG3638
CG11403
CARPB
CG1354
raskol
sick
CG10481
Fancm
Eh
CG14331
CG14330
CG4603
CG4597
CG15213
CG15212
Ptpmeg2
CG3106
Myd88
SNF4Agamma
RagA-B
CG11970
CAHbeta
dco
Chchd3
Sox100B
CG12007
VhaM9.7-d
Actn3
Tak1
CG42579
Scp2
CG14903
CG14891
CG13962
PCB
Ntmt
CG46338
CG30010
Lime
CG12744
Asator
Men
CG15429
Atet
nol
NaPi-III
CG32074
Sod1
mRpL2
Ufd1-like
FoxK
CG2199
Ptp61F
312
Mes2
CG15373
eya
CG8119
CG8117
CG14186
CG14185
sNPF-R
Got1
CysRS
CG30094
stc
CG15269
Rrp46
Irp-1B
CG6345
CG6325
CG8945
CG4955
wcy
CG4949
CG43077
Kank
Lap1
CG12853
ADPS
CG10257
CG12782
Cpr76Bc
Cpr76Bb
Cpr76Ba
Npc2b
CG9920
CCHa1
fal
Gbs-76A
wgn
CG14270
CG12206
CG10804
CG10803
CG10802
GNBP2
Capr
CG42495
GNBP1
CG6163
caps
GCS2alpha
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
Gr89a
Decay
Cad89D
CG42342
CG6330
Spag1
Tsp97E
Gr97a
RpI135
SIFaR
CG4213
Tsp
cort
Nse1
Nhe3
CG11327
CG46468
Rubicon
CAH3
Pde1c
crol
CycY
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
Tlk
Rala
CG9705
CG13025
Nrt
CG43980
CG9380
EbpII
Ebp
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
CG42268
CG43693
CG7888
CkIIalpha-i3
CG13896
CG13895
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
CG31324
CG6142
LanB2
CG3335
tzn
Spc105R
Six4
CG3698
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
Vago
CG2076
sev
PDZ-GEF
CG31787
Sfp36F
CG43362
CG5790
Dys
CG15025
Socs16D
CG12986
for
Drgx
flz
Mbs
Diap1
qvr
E(Pc)
mud
mRNA-cap
Fbxl4
CG32599
CG1434
RpLP2
CG8311
CG8306
Ubr1
CG8303
CG5089
tx
CG6503
CG34291
kirre
N
hwt
tkv
Cyp4ac3
Bub1
Bsg25D
Lasp
Dab
CG9692
CG43954
kra
asl
SecS
Rga
Atu
CG12617
CG33226
CG30287
CG30286
CG30283
par-1
RapGAP1
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
CG3358
galla-2
OXA1L
CG6418
CG6409
Blos4
zip
uzip
CG31821
Tep1
CG31823
CG31735
snu
Sid
CG33346
Nepl19
Nepl18
Nepl17
Nepl20
RpS21
CG3117
CG3104
CG2991
CG2983
ham
Ndae1
CG31909
CG13786
Sr-CII
RpS11
CG8858
Loxl1
CG11334
CG11333
Picot
CG34458
CG34457
CG10139
Adgf-E
Svil
CG16762
unc-5
Hr51
CG31064
CG42814
CG31068
CG42813
PK1-R
CG12402
Smyd5
Oga
Nelf-A
CG5862
CG3337
Or67d
can
Pp1-13C
CG6227
CG12608
DCX-EMAP
CG6184
CG6195
CG31220
CG31219
subdued
Vha13
Nup58
Fmr1
fl(2)d
CG6329
CG13339
CG6347
CG6337
mdlc
CG4390
CG17193
goe
Twdlalpha
TwdlZ
CG32568
tub
CG34112
CG14646
CG9855
CG9853
lost
CG14647
CG42700
Cam
sbr
Imp
CG15210
CG15209
pkaap
crp
Cyp303a1
CG17329
CG13258
cher
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
CG5897
wdp
Gp150
east
PIG-K
Tao
CG14219
CG14205
CG14218
CG14204
velo
Ist1
CG8549
dikar
mRpS18B
Kua
CG13970
Rsph3
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
soti
sens
flr
CG10222
SP1173
CG8519
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
Lcp65Ag1
CG42749
pzg
ppl
Cpr78Cb
Cpr78Ca
CG12974
AcCoAS
betaTub60D
CG43332
CG7509
CG18808
CG33927
nxf4
CG43290
CG31496
CG1902
CG30339
GstT2
GstT1
CG12926
Wdr62
CG31663
CG15358
FucTA
Pex3
Pdi
CG32147
CG12316
piwi
TTLL4A
CG12253
SCAR
ATPsynG
meso18E
CG12531
Shmt
CG3726
CG12236
CG4020
Act5C
GABA-B-R3
Eaat2
obe
Trissin
CG5213
Dh31-R
CG4734
CG17047
CG14082
CSN3
CG3288
CG13255
CG11456
Spn75F
trio
CG9205
CG14417
CG14416
Sox21a
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
CG32117
CG12520
waw
bbx
Sep1
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
Tpst
CG46311
CG32633
CG32631
CG11816
scrib
plum
bun
Gmap
CG6340
Fs
scb
stg
SP1029
CG45544
CG31445
lab
Edg84A
Ccp84Ag
Ccp84Af
Ccp84Ae
Ccp84Ad
Galphao
CG12895
CG34253
CG44004
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
mthl2
TM9SF3
Eaf6
CG10591
CG31191
Atpalpha
Pez
Cpr
CG14383
Paip2
CG7381
CG7091
CG31342
CG9743
RpS7
CecC
CecB
CecA2
CecA1
Anp
CG4991
CG16700
Eip75B
Cyp12d1-d
BBS4
CG13229
ncm
RpS26
Srpk79D
Csp
CG11523
Rich
Ddx1
bt
pont
Sirt6
Nuak1
Mef2
CG4593
CG3032
cm
CG42308
CG32736
beta3GalTII
Vps25
Gle1
CG8635
Cirl
CG8642
Pax
CG13085
Alp12
lectin-37Db
lectin-37Da
Lectin-galC1
RtcB
Rab9
ver
nst
eIF2beta
Tsf2
Pmm2
Gcn5
CG34242
Gr59d
CG13538
RpL37b
Gr59c
CG42703
CG9876
shep
AP-2alpha
CG1428
CG1421
CG11629
Mst36Fb
CG43339
CG43338
CG9777
mthl1
SNRPG
RpS19a
Rok
sky
RPA2
Mtp
CG9272
CG43739
Panx
CG9485
CG33655
CG30394
Tsp68C
Hml
CG8757
CG8750
CG43184
Lst
Cdk4
CG8490
Den1
CG8839
CG34021
garz
CG8841
ana3
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
CG9988
CG10011
CG14062
CG5890
CG5886
CG14545
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
CG7065
Jupiter
CG6808
CG14711
CG14710
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
CG42853
CG42784
out
axo
RhoGEF64C
CG7514
CG18418
CG15876
CG13713
nrv3
CG8665
Ipk1
Cib2
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
Toll-7
Idh3a
CoRest
CG12231
cpo
Rim
CG43445
CG3603
CG17959
CG14423
CG14422
CG14421
lz
c11.1
Prm
Fhos
CG6576
CG13306
CG13192
CG14947
prd
Pex19
CG12502
dpr20
Dci
tara
ssp6
CG6610
CG13295
CG13293
fra
CG8818
CG8569
CG33632
achi
CG13151
Prp31
Msh6
CG7011
CG6878
Rab9E
CG2111
pHCl-1
nej
btd
tapas
MED8
CG8929
slim
Ttd14
CG5189
CG30120
Prp19
rswl
CG17669
CG14459
CG1724
CG14579
CG34165
CG15282
Gr58c
Gr58b
CG9304
CG34029
Gr58a
ppk9
glu
LSm7
ChLD3
BuGZ
wts
dj-1beta
cindr
bowl
bark
CG31960
CG31698
CG15404
Nepl16
CG34027
CG45095
Usp10
CG13907
tow
CG14820
retm
frj
Rchy1
CG9527
alphaSnap
Spn77Ba
Spn77Bb
polo
CG34313
CG32832
CG31743
Snp
CG44249
CG13501
CG13500
CG9896
InR
Gr98d
Gr98c
Gr98b
ND-39
ZnT77C
CG5078
CG32425
CG18281
CG17637
CG33557
CG2990
Cht6
CG10562
CG10560
CG10553
CG31436
CG31099
CG31087
CG10559
CG10550
RpL37a
Sytalpha
Oli
CG6870
HisRS
Ggt-1
CG6470
Bx
CG6481