ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX749041 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◣ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Ppr-Y
ORY
mtSSB
CG6126
CG31287
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
dco
Chchd3
Sox100B
soti
Sox21a
ush
CkIIalpha-i3
CG13896
CG13895
CG15919
CG15615
Jupiter
CG6808
CG14711
CG14710
gol
Mef2
CG43980
unc-5
Hr51
shop
htk
sbr
Imp
CG15210
CG15209
Ipk1
Cib2
snu
Sid
CG33346
CG8119
CG8117
CG34268
CG34267
CG34165
CG15282
Mst89B
bor
asun
Tpst
CG46311
CG32633
CG32631
CG11816
EcR
Gpa2
CG7956
CG43693
CG7888
sens
flr
CG10222
RapGAP1
TfAP-2
Gr89a
Decay
CG42342
Cad89D
RpLP2
CG8311
CG8306
CG8303
CG5089
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
InR
Socs16D
CG12986
dar1
CG14974
CG10359
CG10357
nej
btd
pdgy
eag
CG9030
CG13280
CG13272
mdy
Cse1
Npc2b
CG9920
CCHa1
CG12007
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
wgn
Tak1
CG42579
CG44439
CG30369
CG2291
CG14760
CG14759
Wnt4
nxf4
CG43290
CG31496
CG31960
bowl
bark
mRpS18B
Kua
CG13970
CARPB
CG1354
Cda5
galectin
dbr
CG11374
Mst36Fb
CG43339
CG43338
CG33557
CG2990
Cht6
Prm
Fhos
CG6576
CG13306
Oaz
phyl
bcd
Ama
zen
Reg-2
CG13893
CG12009
CG12017
PDZ-GEF
Su(var)2-HP2
Sec61beta
Had2
CG12863
CG31191
Atpalpha
Eip75B
CG2016
CG1124
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
CG3358
CG10365
nau
CG10232
vir-1
SC35
eRF3
CG6405
CG6388
CG5446
CG5435
Rrp46
Irp-1B
CG6345
CG6325
kl-5
Ldh
CG10163
Best2
Ndae1
CG31909
CG13786
Edg91
CG34281
CG14329
CG14327
CG14326
CG14324
CG14323
AttD
CG14325
stg
SP1029
CG45544
CG31445
mtd
Tim17b1
CadN
CG7794
DNaseII
CG7785
Mes2
Ptpmeg2
CG3106
PRY
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
CG9171
obst-E
CG33226
CG30287
CG30286
CG30283
Zasp52
CG33465
CG31275
sim
CG43063
Pde8
retn
Fmr1
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
pkaap
Cyp303a1
crp
CG17329
CG13258
for
Drgx
CAH15
otp
Rx
Sytalpha
Oli
CG6870
Rpn12R
ind
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
zyd
Rab21
Coa7
FucTC
RagA-B
CG11970
CAHbeta
PGRP-LC
PGRP-LA
Syn2
Men
out
sick
CG10481
Gsc
CG13689
Cyp12d1-d
BBS4
CG13229
CG32461
Mtpalpha
jp
brwl
gcm
CG31709
TTLL4A
piwi
CG12253
SCAR
ATPsynG
Fancm
CG43332
Thor
Pgant4
Pif1
ND-PDSW
msl-2
CG31776
Sr-CII
RpS11
CG8858
ham
CG31036
CG15517
CG15515
CG31038
CG42354
CG42353
Svil
CG16762
CHES-1-like
CG15478
retm
Rchy1
frj
CG9527
Dys
CG15025
Usp30
mof
CG16721
Abd-B
CG14762
Odc2
Odc1
CG46301
cnn
CG30062
cbs
shot
DJ-1alpha
CD98hc
Sfp84E
Os-C
CG16898
CG31324
CG6142
Nc73EF
Cpr73D
CG9896
Ubr1
TwdlE
lectin-28C
CG14535
CG9380
EbpII
Ebp
mamo
ben
Ste12DOR
Indy
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
Obp99d
Dup99B
CG9497
CG9498
ppk7
ppk14
CG9500
muc
CG5958
TotX
Grik
hdly
CG7763
CG34054
CG30026
Smyd4-3
Gbs-76A
fal
HisRS
Ggt-1
CG6470
Bx
CG6481
raskol
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
ome
CG4914
CG43121
GABA-B-R3
Eaat2
slbo
bs
Rubicon
CAH3
SNF4Agamma
CG6118
Act88F
Spn28Db
Spn28Da
SmE
CG7102
CG34132
siz
TfIIA-S
tbrd-1
Pli
Cyp12e1
CG46270
CG2199
Ptp61F
312
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
lace
TMS1
GluRS-m
fax
TyrRS
CG33158
VhaM9.7-d
Actn3
CG14186
CG14185
sNPF-R
CG1077
Osi1
Cpr100A
CG15546
CG15545
GNBP2
CG42495
Capr
GNBP1
upd2
Picot
CG34458
CG34457
TM9SF3
mthl2
Eaf6
CG10591
mRpS33
ema
CG17565
CG14881
CG31279
RpS28a
Mgat2
CG7920
Axn
Tsp68C
Hml
CG8757
CG8750
CG43184
FucTA
Pex3
Pdi
CG32147
CG12316
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
nerfin-2
CG33784
Alp13
CG33783
CG7509
CG18808
Spn
CG32295
CG9220
Alp11
LanB2
CG3335
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
RpS26
ncm
CG42784
Trissin
obe
CG5213
VhaAC39-2
unk
CG13829
Irk1
Pde1c
CycY
crol
CG13192
sced
Opbp
geminin
Dpit47
Adf1
CG9410
CG15908
Neu2
CG7519
CG7202
croc
Lcp65Ag3
l(3)mbn
Cpr65Au
Lcp65Ag2
Scp2
CG14903
CG14891
Tsp
Nse1
Nhe3
cort
CG11327
CG42700
Cam
zip
uzip
Egm
CG9005
Gr98d
Gr98c
Gr98b
Lk
CG34039
CG42758
sm
CG43277
CG42753
CG18367
CG15124
Tbce
SCAP
CG14591
CG34211
RunxA
wdp
Gp150
Usp47
DnaJ-1
flz
CG5568
CG18586
CG13962
CG41562
Lasp
Dab
CG9692
CG43954
Myd88
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
Cyp308a1
CG43233
CG31683
CG18858
CG2493
Cdc23
stl
CycB
CG42260
blw
CG30271
Pdp1
CG8301
CG33654
CG16789
CG9399
CG9396
CG16790
Son
Kap-alpha3
cmpy
CG34260
Prp31
Msh6
CG7011
CG6878
HnRNP-K
CG42673
Eh
CG14331
CG14330
stc
CG15269
CG12617
abd-A
CG8945
CG4955
wcy
CG4949
CG43077
Wdr62
CG31663
CG15358
viaf
Pop2
Grip163
CG6928
fra
CG8818
CG8569
CG33632
CG13151
achi
Shmt
CG3726
CG12236
CG4020
Act5C
CG9988
CG10011
CG14062
mthl14
E(bx)
Lst
Cdk4
CG42327
CG14715
sigmar
l(2)dtl
CG5504
Alg3
Prat2
Sesn
CG46429
CG18128
tapas
MED8
CG8929
cpo
Rim
CG43445
Ten-a
Usp7
Cyp318a1
Cyp311a1
CG15429
Atet
ftz-f1
Rlip
CG5697
CG17278
CG34253
CG44004
SiaT
Cpr76Bc
Cpr76Bb
Cpr76Ba
pzg
ppl
Cpr78Cb
Cpr78Ca
CG12974
AcCoAS
waw
Sep1
bbx
sol
peng
cher
dila
CG30001
eya
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
Lmpt
CG1902
CG30339
GstT2
GstT1
CG12926
CG42268
N
kirre
CG42346
Smyd5
Oga
Nelf-A
CG5862
CG3337
CG9743
RpS7
CecC
CecB
CecA2
CecA1
Anp
Got1
CysRS
CG30094
Asator
velo
Ist1
CG8549
dikar
SIFaR
SRPK
dup
Pms2
CG33927
CG12730
Ca-beta
Vm32E
CG4788
Eglp4
Eglp2
Eglp3
fz2
Ref1
Dpck
CG1943
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
Ufl1
CG1965
CG1105
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
RpS2
mtDNA-helicase
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
mdlc
CG4390
CG17193
alpha-Man-Ia
Gip
CG43740
CG2909
CG15306
RpS21
CG3117
CG3104
CG2991
CG2983
CG4593
CG3032
cm
CG42308
CG32736
qvr
E(Pc)
CG34435
CG34434
RhoGAP5A
Pop1
Mlc-c
CTCF
Sec63
pst
Srp19
qm
CG14834
CG15040
CG5890
CG5886
CG14545
LSm7
glu
ChLD3
BuGZ
tzn
Spc105R
Six4
CG3698
betaTub60D
Spn77Ba
alphaSnap
Spn77Bb
CG15130
CG10949
Arpc2
CG10947
nol
NaPi-III
CG32074
Sod1
Ufd1-like
mRpL2
FoxK
larp
Or98b
Moca-cyp
Gfat2
AP-2alpha
RpLP1
ebi
CG13692
CG13690
CG11885
BBS8
ex
lab
Edg84A
Ccp84Ag
Ccp84Af
Ccp84Ae
Ccp84Ad
Kank
Lap1
CG12853
ADPS
CG10257
Rgk3
ASPP
Chs2
CG7458
pk
CG33140
CG30385
CG30384
CG33217
dnc
dnt
CG13086
CG17349
Poc1
ImpL1
CG14110
CG14107
CG10171
Fs
scb
ninaA
PNUTS
dbe
aru
prage
Adar
RpL37a
OXA1L
galla-2
CG6418
CG6409
Blos4
fl(2)d
CG6329
CG13339
CG6347
CG6337
Tlk
Act57B
Rala
elav
CG4293
Appl
CG6184
CG6195
CG31220
CG31219
Vha13
subdued
Nup58
PK1-R
CG12402
GILT3
GILT2
SPE
Toll-7
eIF3d1
CG18754
CG16710
CG46468
Rpn13
Cp1
CG42806
PheRS-m
St4
CG18568
Pex7
CG13305
Arr2
CG30378
azot
rnh1
PIG-X
drosha
CG8728
CG34431
CG34430
CG30380
CG30379
SPARC
Rb97D
ms(3)K81
CG5500
Lerp
IntS12
His2Av
ball
Gr59d
CG13538
RpL37b
Gr59c
CG42703
CG9876
GCS2alpha
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
tow
CG14820
sls
CG18545
jumu
CG31406
CG12592
sle
Ttd14
slim
CG5189
CG30120
Prp19
rswl
CG17669
pes
Snoo
CG7231
Oatp30B
Pez
Cpr
shep
Cpr30B
CG17855
CG13114
CG13113
CSN3
CG3288
CG13255
CG11456
ver
Tsf2
Pmm2
nst