ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100251 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◣ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Ipk1
Cib2
CARPB
CG1354
CG16898
Pde1c
CycY
crol
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
Obp99d
Dup99B
Ppr-Y
ORY
kl-5
soti
RapGAP1
CG31960
bowl
bark
HisRS
Ggt-1
CG6470
Bx
CG6481
Tpst
CG46311
CG32633
CG32631
CG11816
dco
Chchd3
Sox100B
Jupiter
CG6808
CG14711
CG14710
CG3358
upd2
Eip75B
CadN
dar1
CG14974
CG10359
CG10357
CG34268
CG34267
Mef2
Wnt4
Gr89a
Decay
CG42342
Cad89D
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
Eip74EF
CG34165
CG15282
sbr
Imp
CG15210
CG15209
CG43980
shop
htk
shep
Rpn12R
ind
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
CG15373
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
CG8119
CG8117
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
CG44439
CG30369
CG2291
CG14760
CG14759
RpS21
CG3117
CG3104
CG2991
CG2983
Tak1
CG42579
CG12782
InR
hwt
Prat2
CG5906
Sprn
CCDC151
CG5568
CG18586
CG43693
CG7888
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
SteXh:CG42398
pkaap
Cyp303a1
crp
CG17329
CG13258
scyl
Su(var)2-HP2
Sec61beta
Had2
CG12863
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
PRY
Nc73EF
Cpr73D
pdgy
eag
CG9030
N
kirre
Lasp
Dab
CG9692
CG43954
unc-5
Hr51
snu
Sid
CG33346
Sox21a
CG42700
Cam
ush
CG5674
Scp2
CG14903
CG14891
Oaz
phyl
mamo
ben
Ste12DOR
mRpS18B
Kua
CG13970
Usp30
mof
CG16721
Toll-7
Zasp52
CG33465
CG4603
CG4597
CG15213
CG15212
mthl14
E(bx)
Zpr1
Ost48
His3.3B
fh
Dlip1
CG9034
CG44532
Bap111
CG7065
nxf4
CG43290
CG31496
muc
CG5958
RpLP2
CG8311
CG8306
CG8303
CG5089
Tao
CG14219
CG14205
CG14218
CG14204
CCY
Lar
CG14947
prd
Gsc
CG13689
bcd
Ama
zen
Ubr1
raskol
trio
CG9205
GABA-B-R3
Eaat2
CkIIalpha-i3
CG13896
CG13895
SNF4Agamma
CG14082
Spn75F
fiz
Eo
CG14406
CG12398
CG9512
Scp1
DCX-EMAP
qvr
E(Pc)
CG31698
CG15404
Twdlalpha
goe
TwdlZ
CG32568
RpS28a
Mgat2
CG7920
Axn
CG9616
CG43291
CG43179
mgl
CG34028
HnRNP-K
CG11360
CG8945
CG4955
wcy
CG4949
CG43077
VhaAC39-2
unk
CG13829
Irk1
EcR
Ptpmeg2
CG3106
Fancm
CG46301
Myd88
Sytalpha
Oli
CG6870
Ubc10
CG5033
Dhit
grh
stg1
CG11566
Spn
CG32295
fz2
tara
CG12535
CG16782
CG10801
CG42808
CG42807
CG12617
CG32264
CG3655
shot
DJ-1alpha
stl
CycB
CG42260
blw
CG30271
Tsp68C
Hml
CG8757
CG8750
CG43184
CG42749
CG6163
sgg
CG3092
fred
wgn
Shmt
CG3726
CG12236
CG4020
Act5C
CanB
XRCC1
CG3309
SK
PDZ-GEF
CG6123
CG6106
Hr4
Ir20a
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33882
His2B:CG33880
His2B:CG33878
His2B:CG33870
His2B:CG33868
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His1:CG33852
His1:CG33807
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His2B:CG33910
His2B:CG33902
His2A:CG33808
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His2B:CG33876
His2B:CG33874
His2B:CG33872
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
His2B:CG33904
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His1:CG33831
His1:CG33828
His1:CG33825
His1:CG33822
His1:CG33819
His1:CG33816
His1:CG33810
His4:CG33907
RagA-B
CG11970
CAHbeta
Npc2b
CG9920
CCHa1
pHCl-1
CG12689
Or65c
Or65b
CHES-1-like
CG15478
TwdlE
lectin-28C
CG14535
Men
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
RunxA
CG31787
Sfp36F
CG43362
CG5790
tx
CG6503
CG34291
CG15198
ver
Tsf2
Pmm2
nst
Gcn5
eIF2beta
CG34242
RpL37a
CG8112
TMEM216
Cks85A
CG11760
scrib
plum
norpA
NO66
mRpL33
mei-9
CG15579
RpI135
CG4213
ken
TM4SF
PHDP
CG4882
CG5597
Mtpbeta
Dop1R2
ppk21
CG12538
Liprin-gamma
CG11298
GABA-B-R2
CG6800
Burs
CG42335
dnc
Lmpt
CG9896
CG6168
CG7573
CG43101
Obp51a
velo
Ist1
CG8549
dikar
His1:CG33813
His1:CG31617
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33804
His1:CG33801
His4:CG33869
His4:CG33881
His4:CG33879
His4:CG33877
His1:CG33861
His1:CG33858
His1:CG33855
His4:CG33875
His4:CG33873
His4:CG33871
CG18518
BomT1
dpy
par-1
CG33557
CG2990
Cht6
TTLL4A
piwi
CG12253
SCAR
ATPsynG
CG46310
mtd
Tim17b1
Taz
mRpL18
Mos
Abd-B
VhaM9.7-d
Actn3
sick
CG10481
CG15919
CG15615
CG43658
Gr58c
Gr58b
CG9304
CG34029
Pex7
CG13305
Arr2
out
ppk9
CG10139
Adgf-E
alpha-Man-Ia
Moe
CG7329
Uros1
CG43058
fand
CG6191
CG45088
S-Lap5
CG34236
CG12464
CG34393
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
Or56a
Obp56g
Pax
CG13085
Alp12
Lectin-galC1
lectin-37Db
lectin-37Da
RtcB
Rab9
Fmr1
CG13192
CG42268
Reg-2
CG13893
mud
mRNA-cap
Fbxl4
CG32599
CG1434
Rilpl
CG32813
CG3719
dsx-c73A
CG42271
Snap25
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
His4:CG33899
His4:CG33897
His4:CG33895
His4:CG33893
His4:CG33891
His2B:CG17949
RNASEK
Mid1
CG14427
CG42673
His1:CG33834
AIMP3
bw
ppk3
Gr59f
Gr59e
TfAP-2
CG31191
Atpalpha
CG7956
CG2016
CG1124
CG42346
Eglp4
Eglp2
Eglp3
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
CG8180
Gmap
CG6340
CG34313
CG32832
CG31743
CG12498
CG12609
CG42815
CG4593
CG3032
CG46457
CG9143
CG11788
CG10444
Mpcp1
CG8908
CG32221
trc
kto
Fibp
Deaf1
RpS18
spdo
Or63a
CG34025
PH4alphaSG2
Jon99Fii
Jon99Fi
waw
Sep1
bbx
Grip91
g
CG11151
CG11134
Vps29
Tfb4
IntS14
CG5080
CG14341
Tango14
capt
Tsp
tkv
Cyp4ac3
Bub1
Bsg25D
Rbfox1
CG9220
Alp11
CG34007
SLO2
cad
RpL17
CG14439
verm
Gbeta76C
CG8765
AkhR
Aatf
Liprin-alpha
homer
CG12898
CG12118
CG12115
CG12106
CG12057
CG12056
sov
tnc
His2A:CG33859
His2A:CG33856
His2A:CG33853
CG11883
ND-39
ZnT77C
CG5078
CG32425
CG18281
CG17637
CG13375
CG12470
CG43125
AANAT1
Naa35
CG7460
CG6034
CG6052
Ste:CG33247
Ste:CG33237
Ste:CG33245
Ste:CG33244
Ste:CG33243
Ste:CG33242
Ste:CG33241
Ste:CG33240
Ste:CG33239
Ste:CG33238
Ste:CG33236
Stt3A
bves
CG3663
Cpr60D
ND-19
CG30161
Cbs
Mgstl
Nedd4
Edc3
U4-U6-60K
CG7564
SMSr
smid
CG8564
akirin
CG33226
CG30287
CG30286
CG30283
CG12730
caps
Mp
CG42354
CG42353
CG9705
CG13025
Nrt
Cyp308a1
Chs2
CG7458
Cda5
galectin
dbr
CG11374
Vago
CG2076
sev
Pomp
vari
CG9328
ctrip
CG1129
Hus1-like
CG4476
S
Atg4a
ast
CG14120
RpL5
CG17490
AP-2alpha
RpLP1
ebi
CG13692
CG13690
CG11885
BBS8
Loxl1
CG11334
CG11333
inc
CG14795
Rubicon
CAH3
prage
Adar
mtSSB
CG6126
CG31287
Thor
Pgant4
Pif1
ND-PDSW
msl-2
CG31776
abd-A
CG9777
Or67d
SNRPG
RpS19a
Rok
mthl1
can
pyd
CG1902
CG30339
GstT2
GstT1
CG12926
Ns4
Amacr
Rhau
dia
CG12426
Cul2
Cyp6t1
sced
Opbp
geminin
Dpit47
Adf1
CG3649
Debcl
Sh3beta
PVRAP
alphaKap4
CG9826
CG9825
CG12490
CG34295
CheB98a
intr
SmD3
Oda
CG34232
EndoG
CCT5
gpp
Ir67a
Or67a
sofe
feo
CG2186
CG2202
CG32669
CG17333
CG33700
wash
CG8860
CG33964
CG13175
SmF
Eip63E
ImpE2
CG42336
CG7741
Obp47b
Fpps
dare
CG30033
CG18336
CG7745
CG43114
GEFmeso
CG43438
CG34162
CG31706
Ste:CG33246
Aldh
CG4438
Pp4-19C
mal
CG15456
CG11710
cactin
Obp19d
Obp19c
CG1695
pzg
ppl
Cpr78Cb
Cpr78Ca
CG12974
AcCoAS
Rsph3
su(w[a])
Rpp21
CG14630
CG32814
CG3021
CG11638
Cdc45
Svil
Neu2
CG7519
CG7202
beat-IIIc
Ndae1
CG31909
CG13786
CG12009
CG12017
RpS26
ncm
PK1-R
CG12402
CG18063
CG12448
CG6966
Est-Q
Hr78
M6
Glg1
CG13989
Muc26B
CG31639
CG43337
SLC22A
DNApol-eta
CG14562
Adhr
Adh
CG9743
RpS7
CecC
CecB
CecA2
CecA1
Anp
kl-3
stg
SP1029
CG45544
CG31445
CG42795
spag
DnaJ-60
CG42568
CG3328
Pld3
CG31627
mAcon1
CG43346
CG43345
Nbr
CG9246
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
CG10730
vls
bwa
lok
barr
Cyp313a4
Tif-IA
RpL21
CG3262
mbo
Gnmt
CG43630
CG8301
CG33654
CG8312
P58IPK
bocks
CG32816
Pgcl
Obp18a
Neurl4
Frl
CG6833
CG13484
sbb
Eip78C
CG8260
Mvd
CG8944
CG8206
CCT6
CG11679
Arp6
CG31206
CG10887
Gr92a
for
GILT3