ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX14474253 | Cultured cell lines
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◣ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

CG5062
MFS17
CG8945
CG4955
wcy
CG4949
CG43077
CARPB
CG1354
Ubr1
Ppr-Y
CG43407
Ugt316A1
Sfxn2
nkd
Acp76A
sr
salr
Ipk1
Cib2
gsb
gsb-n
mib1
mRpS31
hzg
GlyP
CG4259
wor
CG44869
Abd-B
VhaM9.7-d
Actn3
vvl
Rubicon
CAH3
CG6163
mRpS33
ema
CG17565
CG14881
CG31279
fl(2)d
CG6329
CG13339
CG6347
CG6337
Cda5
galectin
dbr
CG11374
tub
CG34112
CG14646
CG9855
CG9853
lost
CG14647
ftz-f1
CG5151
CG33796
CG33795
Fmr1
Toll-7
CG13465
BobA
dock
PGAP2
Clp
CG3862
CG3662
CG15880
Saf6
Pex12
Dbp21E2
Nnf1b
scrib
plum
Pdp1
sgg
Pde1c
crol
CycY
CG9896
Lasp
Dab
CG9692
CG43954
JYalpha
Tlk
HIP-R
Fas3
Myd88
Nc73EF
Cpr73D
CG43693
CG7888
stl
blw
CycB
CG42260
CG30271
ND-39
ZnT77C
CG5078
CG32425
CG18281
CG17637
Svil
CG16762
caps
btsz
SmydA-2
CG3808
CG18135
CG34256
CG11619
nol
NaPi-III
CG32074
Sod1
mRpL2
Ufd1-like
FoxK
ORY
Vha44
Hmgs
Nup62
CG7997
insv
Elba2
ND-B17.2
Arpc5
Drp1
CG15394
mub
RpS21
CG3117
CG3104
CG2991
CG2983
CG18557
shot
DJ-1alpha
MBD-R2
CG4115
CG10041
CG10038
CG44956
TAF1C-like
MESK2
Fkbp14
CG46395
CG14947
prd
Pex19
bun
HisRS
Ggt-1
CG6470
Bx
CG6481
Ptpmeg2
CG3106
primo-2
primo-1
kmr
Ubc87F
CG31469
Adgf-D
Adgf-C
lectin-28C
TwdlE
CG14535
CG42700
Cam
svp
Sfp87B
CG17738
mthl14
E(bx)
mtd
CG31538
CG13192
Mef2
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
CG15130
CG10949
Arpc2
CG10947
CASK
Gr93a
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
unk
VhaAC39-2
CG13829
Irk1
CG9593
alpha-Man-IIb
CG46310
CG34172
CG10874
Neu2
CG7519
CG7202
croc
scyl
Tpst
CG46311
CG32633
CG32631
CG11816
pkaap
crp
Cyp303a1
CG17329
CG13258
fiz
Eo
CG14406
CG12398
CG9512
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
kirre
N
CG34268
CG34267
CG3358
Vps29
Tfb4
l(2)10685
MFS3
Iris
CG4577
pk
Spn43Aa
CG12828
nec
Spn43Ad
Spn43Ab
kl-5
Lmpt
Su(var)2-HP2
Sec61beta
Had2
CG12863
Shmt
CG3726
CG12236
CG4020
Act5C
InR
par-1
esn
Usp47
DnaJ-1
RpLP2
CG8311
Lst
Cdk4
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
CG42853
Smyd5
Oga
Nelf-A
CG5862
CG3337
sky
RPA2
Mtp
CG9272
CG43739
Dll
CG42851
CG9705
CG13025
Nrt
CG31275
RpS20
CG17272
CG17271
CG31223
AdSS
Synd
CSN3
CG3288
CG13255
CG11456
Got1
CysRS
CG30094
unc-5
Hr51
Prat2
CG5116
XNP
CG42488
Dhap-at
CG5112
CG33494
CG34313
CG32832
CG31743
tweek
CG6115
CG42556
vri
RpS28a
Mgat2
CG7920
Axn
lz
c11.1
CG9497
Pez
Cpr
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
ap
Esyt2
capu
CG31522
CG31523
Gmap
stc
CG15269
egl
CG5532
CG34105
CG13560
CG12491
CG11300
Eip75B
CG3588
Fancm
Rrp46
Irp-1B
CG6345
CG6325
dnt
CG13086
CG17349
stg
SP1029
CG45544
CG31445
velo
Ist1
CG8549
dikar
Rsph3
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
RunxA
qjt
CG13733
CG6333
edin
Oatp74D
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
Dif
CG5043
CG33928
CG15403
mthl2
TM9SF3
Eaf6
CG10591
Spn
CG32295
Mtpalpha
jp
brwl
gcm
CG31709
pyd
osk
ScsbetaA
Mbs
Diap1
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
Npc2b
CG9920
CCHa1
PK1-R
CG12402
qvr
E(Pc)
l(1)G0007
l(1)G0469
galla-2
OXA1L
CG6418
CG6409
Blos4
Sarm
CG42591
CG42590
AP-2alpha
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
ex
CG5906
Sprn
CCDC151
Indy
lectin-46Cb
lectin-46Ca
CG34033
CG1648
dila
CG30001
FucTA
Pex3
Pdi
CG32147
CG12316
chif
CaBP1
CG4455
CG42231
CG44405
CG42266
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
CG17698
larp
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
Srpk79D
Csp
CG11523
Rich
Ddx1
Rlip
CG5697
CG17278
CG31191
Atpalpha
CG9650
CG31064
CG42814
CG31068
CG42813
dco
Chchd3
Sox100B
slim
Ttd14
CG5189
CG30120
Prp19
rswl
CG17669
Nedd4
Edc3
mof
Usp30
CG16721
Prp31
Msh6
CG7011
CG6878
mnb
Gss2
Gss1
CG6788
CG12985
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
Dscam1
Mrtf
Acp62F
beat-IIIc
ms(3)K81
SPARC
Rb97D
CG5500
ball
Lerp
IntS12
His2Av
GluProRS
CG31140
AP-1sigma
ush
muc
CG5958
Cyp6a18
prage
Adar
zip
uzip
viaf
Pop2
Grip163
CG6928
dsx
tbrd-1
TfIIA-S
Pli
eg
CG43895
rpr
Rala
nsl1
CG9932
Jupiter
CG6808
CG14711
CG14710
Glut3
upd2
CG1688
por
CG6179
betaCOP
Tsf1
Awh
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
CG2841
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
Obp99d
Dup99B
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
CG7065
Pde8
retn
ninaA
dbe
aru
PNUTS
CG5890
CG5886
CG14545
RhoGEF3
miple2
CG32845
ttm2
Sox102F
MED26
mIF2
Ppn
fru
mam
CG18371
Loxl1
CG11334
CG11333
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
CG12581
Vps24
cpx
MP1
Nepl11
fal
Gbs-76A
CG34460
CG34459
Reg-2
CG13893
Sur
Snx17
RpL7
Ripalpha
CG5731
CG5727
CG34159
Fum4
LanB2
CG3335
DCX-EMAP
Sr-CII
RpS11
CG8858
TwdlX
CG34325
CG32572
TwdlC
RYa-R
CG31076
CG31075
CG14253
CG31077
Lim1
dup
SRPK
Pms2
SmydA-4
CG42339
CG1552
mthl13
CG33144
jim
CG45428
CG11226
stw
CG12782
CG1142
soti
Scp2
CG14903
CG14891
CG43055
CG31698
CG15404
Rel
Nmdmc
Mst85C
Kdm2
tzn
Spc105R
Six4
CG3698
GNBP2
Capr
CG42495
GNBP1
dpr16
CG12590
snu
Sid
CG33346
fra
CG8818
CG8569
CG33632
achi
CG13151
CG12617
mRpL14
Raf
Ilp6
CG14500
CG14499
CG33958
ko
CG33285
Egm
CG9005
Atf3
eEFSec
CG10795
Acox57D-p
Acox57D-d
cv-2
nej
btd
h
Sox21a
CG4593
CG3032
cm
CG42308
CG32736
CG8300
CG4617
CG4615
fz4
RpS15Aa
Jafrac1
IP3K2
CG15747
CG8306
CG8303
CG5089
CG13229
shn
Tet
Ir60a
nord
RhoGAP100F
Rift
FeCH
CG42233
CG1971
ATPsynCF6
Sec13
pnt
DNApol-epsilon255
pyx
Kaz1-ORFB
CG13877
CG42846
CG34454
CG34453
CG33229
Nmdar1
CG43845
Itpr
CTCF
qm
Srp19
CG14834
lark
eco
Cln7
tkv
Cyp4ac3
Bub1
Bsg25D
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
Gug
CG6983
Unr
CG12075
Moe
tey
Ca-beta
Vm32E
CG4788
nrv2
nrv1
PRY
CG31674
CG31673
CG9331
CheB38c
CheB38b
CheB38a
CG33322
lawc
Trf2
PIG-T
Hr3
CG46321
Hdc
CG12912
ich
dati
CrebB
CG6123
CG6106
sigmar
l(2)dtl
CG5504
Alg3
Sesn
CG46429
CG18128
zld
dah
Top1
HDAC6
CG9114
dve
wts
dj-1beta
cindr
Gr58c
Gr58b
CG9304
CG34029
Gr58a
ppk9
Ir100a
Mccc1
Acf
tara
Or67d
can
trio
CG9205
GstD7
GstD6
GstD5
GstD4
GstD9
GstD3
GstD2
GstD1
Tim17a1
GstD10
CG32521
CG1494
CG13280
CG13272
mdy
Cse1
NetA
CG43610
CG17377
CG17376
CG17375
CG11236
ND-15
CG4822
CG13694
Gs1
CG3164
Nepl19
Nepl18
Nepl17
Nepl20
Gsc
CG13689
Wdr62
CG31663
CG15358
Cyp9b2
Cyp9b1
rn
CG42544
CG10029
Ythdc1
Ids
CG12012
CG12010
CG6184
CG6195
CG31220
CG31219
subdued
Vha13
Nup58
Tbce
SCAP
CG14591
bi
CG42354
CG42353
dgt4
cib
brn
Xpac
Nsun2
CG6379
CG15375
cort
Nse1
Nhe3
CG34310
Spn27A
Galt
cup
CG13771
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
numb
CG33723
FucTB
CG42847
scat
RpS28-like
CG3769
CG3092
fray
CG7694
qin
Prm
Fhos
CG6576
CG13306
EcR
Exn
CG31145
Pax
CG13085
Alp12
lectin-37Db
lectin-37Da
Lectin-galC1
ETHR
CG5892
C15
CG33226
CG30287
CG30286
CG30283
PDZ-GEF
SmD3
Oda
CG34232
EndoG
CCT5
Prp8
CG13177
glu
LSm7
ChLD3
BuGZ
tapas
MED8
CG8929
CG13868
CG13871
SNF4Agamma
Poc1
ImpL1
CG14110
CG14107
CG10171
Mitf
betaTub60D
CG43759
ss
milt
Rab30
Caper