ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11499363 | 0-14h embryos
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◣ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Ppr-Y
ORY
CheB93b
CheB93a
Ugt49B2
CG7907
Gpa2
slbo
bs
CG13323
CG13324
mRpL13
CG10602
Spn
CG32295
ms(3)K81
SPARC
Rb97D
CG5500
ro
T48
RpS21
CG3117
CG3104
CG2991
CG2983
CG4116
CG33217
YL-1
CG33129
CG16743
dpr2
CG45084
BicC
beat-Ia
CG14995
Gad1
CG14990
CG14989
CG14762
Odc2
Odc1
Muc14A
nmo
Pop4
CG8209
HP4
zyd
Rab21
Coa7
FucTC
d
CheA29a
CG43796
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
Lcp65Ag1
CG4702
SteXh:CG42398
CG41562
Pka-R1
CG3618
Mst77F
sick
CG10481
Fie
Ubi-p63E
mge
ida
Sc2
Gr63a
Ccz1
CG14977
InR
CG17032
CG17029
CG17026
l(3)72Ab
CG10516
PRY
Rtnl1
Tfb5
SelT
CG31917
lace
CG5382
rdhB
Sar1
PSR
Muted
CG7071
Tlk
Rala
upd2
toc
PpD6
bor
asun
Mst89B
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
Abd-B
VhaM9.7-d
Actn3
CG34376
CG34288
CG12499
Rpn7
AP-2mu
kl-5
RpS28a
Mgat2
CG7920
Axn
CG12730
rdgA
CG43255
CG12661
CG17600
S6kII
CG34253
unc-5
Hr51
eve
TER94
Stlk
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33882
His2B:CG33880
His2B:CG33878
His2B:CG33870
His2B:CG33868
His1:CG33813
His1:CG31617
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His1:CG33852
His1:CG33807
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33804
His1:CG33801
His4:CG33869
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His2B:CG33910
His2B:CG33902
His2A:CG33808
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His2B:CG33876
His2B:CG33874
His2B:CG33872
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
His2B:CG33904
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His1:CG33831
His1:CG33828
His1:CG33825
His1:CG33822
His1:CG33819
His1:CG33816
His1:CG33810
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
Hsp70Ba
CG5608
His4:CG33899
His4:CG33897
His4:CG33895
His4:CG33893
His4:CG33891
His1:CG33834
CG43407
Ugt316A1
Sfxn2
Mkp3
lovit
vtd
SPoCk
l(3)04053
CG7369
CG11241
kirre
N
CG12769
His2B:CG17949
His4:CG33907
Eglp4
Eglp2
Eglp3
CG1924
Pp1-Y1
Tpst
CG46311
CG32633
CG32631
CG11816
CG17698
CG34268
CG34267
CG40228
CG11357
CG42540
CG33777
Sr-CII
RpS11
CG8858
shot
DJ-1alpha
CG6073
CG34130
CG34129
CG31086
CG14688
CG6465
Skeletor
PPP4R2r
spri
RFeSP
CG31935
CG14352
CG32687
Or56a
CG9988
CG10011
CG14062
Pex7
CG13305
Arr2
CG30069
pasi2
CG16749
Aduk
CG12951
HP1e
CG8861
mRpL55
cdi
CG6040
ATPsynD
Ipk1
Cib2
CG3355
Atg8a
CG15211
BTBD9
Tango5
Duba
CG42832
Muc68Ca
CG6083
Akr1B
PCID2
CG43798
CG15635
BG642163
Gr21a
CG13947
CG13946
CG12506
Pkg21D
CG3544
CG9380
CG30428
CG33680
Prat2
SNF4Agamma
CG12680
RapGAP1
pan
CG14082
fz2
CG34165
CG15282
CG7156
14-3-3epsilon
repo
CG18598
robl37BC
RpL30
CG31793
fl(2)d
CG6329
CG13339
COX7AL
COX7A
CG9601
Arl2
CG7352
stck
DppIII
Atg13
ver
nst
eIF2beta
Tsf2
Pmm2
Gcn5
CG34242
rgn
CG44836
RAF2
Agpat3
roq
Agpat4
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
mtDNA-helicase
RpS2
Bka
CG13124
Muc30E
dx
RpL7A
CG34417
Spat
CG42340
CG3918
CG3342
wts
dj-1beta
cindr
Wnt4
CG31324
nAChRalpha3
dysf
CG42238
CG44666
CG43711
CG43710
CG43667
CG43666
CG43709
CG13443
CG33226
CG30287
CG30286
CG30283
Klf15
CG15472
MFS9
Or92a
MtnB
CG14340
mtRNApol
CG14339
CG4629
Wdr62
CG31663
CG15358
bun
Cpr97Eb
CAH9
eater
CG17189
CG14259
CG14258
Cpr97Ea
pont
Sirt6
Nuak1
CG3999
mthl14
E(bx)
Lk6
l(3)neo38
Ir21a
l(2)gl
CG7763
CG34054
CG30026
red
trx
Drip
AGO3
Ptp4E
CG44774
swi2
rdgBbeta
CG31191
Atpalpha
mam
RN-tre
Ctf4
CG8067
scaf6
Pop5
Papst2
rogdi
TpnC73F
CG7724
His4:CG33881
His4:CG33879
His4:CG33877
His1:CG33861
His1:CG33858
His1:CG33855
mRpS33
ema
CG17565
CG14881
CG31279
bdg
bug
Mlf
Diap2
CG8299
COX6AL
Cyp4aa1
CG43439
CG32388
Galphai
CG10063
nAChRalpha4
Muc12Ea
prc
Muc68E
CG42397
UQCR-11
CG43896
CG14125
Lasp
Dab
CG9692
CG43954
Indy
ome
CG4914
CG43121
vig
vas
solo
TfIIS
CG33679
ck
LanB2
CG3335
CG12054
Zwilch
CG15561
CG1542
ATPsynC
chp
fs(2)ltoPP43
CdGAPr
CG10466
Nup54
CG43204
CG13154
Tmem18
Dyb
DUBAI
CG30334
Prm
Fhos
CG6576
CG13306
unc-119
CG2059
CG1677
Pits
LIMK1
Sep4
mahe
Ubr3
RpS14b
RpS14a
CG10778
CG13989
Muc26B
CG31639
sing
CG13012
CG13010
Axs
PDZ-GEF
dco
Chchd3
Sox100B
CG43658
Smyd4-3
MCU
RpS25
CG6689
CG4820
ZnT86D
CG6693
scpr-C
GCC88
CG17726
RpL3
Reg-2
CG13893
CG12426
CG32816
Pgcl
CG31710
pelo
hoip
Pka-C1
CG43677
CG43668
RpL37a
CG7991
Srrm234
RpL23A
RabX5
CG7974
CG13930
CG9171
zip
uzip
CG7239
CG14005
CG11034
His2A:CG33859
His2A:CG33856
His2A:CG33853
His4:CG33875
His4:CG33873
His4:CG33871
Tsp96F
SppL
Lnk
Hsp70Bbb
Hsp70Bb
Hsp70Bc
grn
Nipped-B
conu
Ref1
Dpck
CG1943
Ufl1
CG1965
CG1105
Pax
CG13085
Alp12
RtcB
Rab9
CG10237
Svil
Rubicon
CAH3
l(3)07882
P5cr-2
CG5823
SF1
siz
Cyp6a9
CG6966
Cyp317a1
Reph
CG3407
Cyp6a8
Cyp6a20
Cyp6a21
WDY
CG18530
CG11600
CG11598
Not10
Snx3
Vha55
Hr39
CG31626
plh
RhoGAP1A
CG17636
CG16762
CG2016
CG1124
dan
lobo
CG13654
CG13653
MFS18
CG15439
Secp43
ND-B8
Gs1l
mRpL27
RpL27A
CG15435
CG15443
CG15436
PAN3
CG32486
DIP-lambda
FIG4
Ets21C
nAChRbeta3
lwr
Spp
Su(var)2-HP2
Sec61beta
Had2
CG12863
Lst
Cdk4
MTF-1
CG42526
RpS17
Tat
aay
Shc
RpS15
CG4927
DAT
CG4945
CG2199
Ptp61F
312
CG12071
CG15547
Sap-r
Cyp4c3
wdp
Gp150
Unc-76
CG4199
Rtca
Strn-Mlck
CG4045
CG4025
CG16903
Thor
Pgant4
CG6118
Act88F
CG8490
Den1
CG8839
CG34021
ana3
Hsp70Ab
Hsp70Aa
aurA
CG3281
GC1
CG12213
CG30047
mld
REPTOR
CG13625
bcd
Ama
zen
EbpII
Ebp
Socs36E
JMJD4
CG5783
CG17681
CG15155
puc
CG7900
Hex-C
CG8079
Scgdelta
CG17361
upSET
Nprl3
CG17359
26-29-p
CG17364
lov
CG43106
Gug
CG6983
Unr
CG6051
grass
Men-b
CG5909
Srrm1
Syx13
RpS4
CG11279
bru1
crok
atilla
ZnT33D
CG6583
CG17217
Rbp4
Hrb87F
B52
CG10920
ND-39
isoQC
CG5969
CG32428
Toll-7
klar
BORCS6
Hipk
Cypl
Pi3K92E
Lrrk
CG43693
CG7888
Plp
Or71a
CG8160
CG8157
CG8155
Arf51F
CG15200
GEFmeso
dgt4
cib
brn
Xpac
Nsun2
CG6379
CG15375
Lac
Flo1
Cdk5
CG8204
CG30466
phr6-4
CG2608
Sfp38D
CG31680
CG17470
CG8366
brun
CG2614
CG2611
CG18810
CG8195
CG12963
CG17493
CG11106
FucTA
Prp31
Msh6
CG7011
CG6878
Ugt303B3
Ugt303B2
Ugt303B1
CG10175
Maf1
CG31211
Cad87A
Obp56g
RpLP2
CG8311
CG8306
Spn47C
Proc-R
CG7024
mew
comt
CG15742
CG46457
CG12538
nol
NaPi-III
CG32074
Sod1
mRpL2
Ufd1-like
FoxK
pkaap
crp
Cyp303a1
CG17329
CG13258
w
CG32795
SiaT
CG31021
CG31019
CG2246
PH4alphaNE3
CG31016
CG42323
CG6290
CG43841
CG32551
CG32548
Tgi
Abp1
stv
nAChRalpha6
Fkbp59
CG4537
CG34183
Mmp2
Uba1
snRNP-U1-C
gukh
euc
dnk
Smu1
Rho1
CG8414
mRpL34
Dg
mtt
tkv
Cyp4ac3
Bub1
Bsg25D
qjt
CG13733
UQCR-Q
SecCl
QIL1
CG34250
CG6333
CG40813
DIP-beta
spg
Apc
CG32248
CG11349
CG13722
CG11350
CG7465
CG9616
CG43291
CG9624
Ice1
Mthfs
CG9875
CG3500
CG34423
vir
Aldh
CG4438
Lar
CG10366
Hakai
PCNA2
CG10268
spi
msb1l
cmpy
CG34260
CG43647
CG43646
Tsp42Eb
CG30160
Tsp42Ee
Tsp42Ed
Tsp42Ec
ifc
eIF4A
chic
png
CG5535
TrpRS-m
MED19
CG7430
CG5577
CG5567
AMPKalpha
ssx
CG14770
CG14377
CG14374
CCHa2
CG9799
mRpS21
Droj2
CG9813
CG8870
Act57B
Ir11a
cic
RYa
mtd
Set1
CG42393
CG32192
tin
mod(mdg4)
MFS17
pre-mod(mdg4)-V
pre-mod(mdg4)-U
pre-mod(mdg4)-O
pre-mod(mdg4)-N
pre-mod(mdg4)-AA
pre-mod(mdg4)-Y
pre-mod(mdg4)-X
pre-mod(mdg4)-W
pre-mod(mdg4)-AE
pre-mod(mdg4)-AD
pre-mod(mdg4)-E
pre-mod(mdg4)-C
pre-mod(mdg4)-AB
Cenp-C
elm
MED27
Wdr33
CG2182
5-HT2B
CG31460
mRpS18A
pch2
Xe7
Atg17
dpr21
CG4306
CG32196
Met75Cb
Met75Ca
Cortactin
AnxB9
r-l
dmrt93B
Khc-73
CG30471
CG30467
Vha36-1
CG8187
Mvl
pbl
CG8281
CG8111
CG32368
G9a