ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX671941 | 5-13h embryos
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◣ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Ppr-Y
ORY
kl-5
Sox21a
soti
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
CkIIalpha-i3
CG13896
CG13895
EcR
Ipk1
Cib2
CG34268
CG34267
ush
CG43980
dar1
CG14974
CG10359
CG10357
dco
Chchd3
Sox100B
CG44666
CG43711
CG43710
CG43667
CG43666
CG43709
CG13443
CG2016
CG1124
CARPB
CG1354
RapGAP1
Jupiter
CG6808
CG14711
CG14710
Mef2
CG12007
nAChRalpha4
CG34165
CG15282
CG18518
CG43438
CG34162
CG31706
CG33217
aurB
Stam
Dnz1
CG12517
bor
asun
Mst89B
CG14427
CG43658
TfAP-2
CG3358
CG44439
CG30369
CG2291
CG14760
CG14759
Wnt4
bcd
Ama
zen
mtSSB
CG6126
CG31287
CG11360
InR
CG43693
CG7888
RpLP2
CG8311
CG8306
CG8303
CG5089
nxf4
CG43290
CG31496
Pde8
retn
Ldh
CG10163
Best2
CAH15
otp
Rx
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
CG13989
Muc26B
CG31639
CTCF
pst
Sec63
qm
Srp19
CG14834
Gr89a
Decay
Cad89D
CG42342
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
unc-5
Hr51
snu
Sid
CG33346
sbr
Imp
CG15210
CG15209
CG46301
CG7800
CheA84a
Tif-IA
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33882
His2B:CG33880
His2B:CG33878
His2B:CG33870
His2B:CG33868
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His1:CG33852
His1:CG33807
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His2B:CG33910
His2B:CG33902
His2A:CG33808
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His2B:CG33876
His2B:CG33874
His2B:CG33872
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
His2B:CG33904
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His1:CG33831
His1:CG33828
His1:CG33825
His1:CG33822
His1:CG33819
His1:CG33816
His1:CG33810
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
mtt
htl
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
shop
htk
CCY
rdx
His1:CG33813
His1:CG31617
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33804
His1:CG33801
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
His2B:CG17949
beat-IIa
Or56a
vis
fdl
s-cup
His4:CG33907
lectin-28C
TwdlE
CG14535
Ndae1
CG31909
CG13786
CG7794
DNaseII
CG7785
UQCR-11
CG16898
axed
GluRIA
loopin-1
CG30389
Hmg-2
Xbp1
CG15657
CG43125
CG43124
CG33308
CG33309
Zip102B
CG32850
CG10752
RhoGAP1A
CG17636
Or69a
Tpst
CG46311
CG32633
CG32631
CG11816
CG31275
Prm
Fhos
CG6576
CG13306
CG7956
Gsc
CG13689
CG18469
CG12699
rut
CG14408
CG14411
AGO3
CG17715
CG8112
TMEM216
Cks85A
CG11760
His4:CG33869
His4:CG33881
His4:CG33879
His4:CG33877
His1:CG33861
His1:CG33858
His1:CG33855
CG4593
CG3032
bowl
bark
CG31960
His2A:CG33859
His2A:CG33856
His2A:CG33853
His4:CG33875
His4:CG33873
His4:CG33871
mgl
CG34028
CG13473
spag
DnaJ-60
CG42568
AANAT1
CG3328
cpo
SteXh:CG42398
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
jim
CG40470
fz
CG12477
CG42784
Hsp60D
Hacd2
CG42810
CG42809
CG46308
betaNACtes2
Tak1
CG42579
pes
Snoo
CG7231
CG44141
CG44140
CG31780
CG18477
CG14120
spz6
CG3894
CG3880
CG12848
GstE12
puc
CG7900
BomT1
CG42323
CG6290
CG43841
CG32551
CG32548
His4:CG33899
His4:CG33897
His4:CG33895
His4:CG33893
His4:CG33891
CycE
CG42336
CG7741
Obp47b
Fpps
Fbl6
dare
CG30033
CG18336
CG18335
CG7745
Dop1R2
RpS28a
Mgat2
CG7920
Axn
sls
CG15200
CG40191
His1:CG33834
side-VI
GCS2alpha
lovit
AstC-R2
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
Obp99d
Dup99B
CG31674
CG31673
Oseg5
EMC4
CG11109
Arf79F
CG33170
CG33169
Spn38F
CG31676
CG13239
smid
SMSr
CG8564
akirin
CG10822
Sh3beta
CG44623
CG44622
plh
CG46302
CG40439
CG40472
CG34031
OdsH
Spn47C
Liprin-gamma
CG11298
Or67a
CG33700
bbg
beat-Vb
CG7763
CG34054
CG30026
Drip
CG46457
CG12538
CG4892
CG34168
CG3649
CG13531
CG9826
CG9825
CG12490
cic
CG42594
CG12682
Gr23a
Prosbeta4R2
Prosbeta4R1
Or23a
CG33125
Trf4
CG3663
Cpr60D
CG2616
CG43254
Cul2
CG33128
CG31928
CG31926
CG31661
CG18131
CG18063
Tbce
SCAP
CG14591
CG34211
CG32457
beat-Ib
prc
Muc68E
CG42397
CG43896
CG14125
CanB
XRCC1
SK
ppk21
nrm
CG6168
Ir40a
stau
CG9616
CG43291
CG43179
CG5756
CG34196
dnc
CG43246
CG9592
CG4613
Aldh
CG4438
Maf1
CG13375
CG12470
CG34297
zen2
pb
CG31206
CG10887
Gr92a
Or82a
CG1092
Dscam3
TwdlG
TwdlV
CG14644
Act57B
CG42402
yata
ATPsyngamma
Wdr24
IntS11
Gnpnat
CIA30
CG7601
Obp56g
Npc1b
CG11227
CG5084
CG10910
Su(P)
CG4101
CG5290
Mo25
NT5E-2
CG43110
veil
CG30103
CG33645
CG33644
CG33643
CG15638
CG4587
Nipped-B
CG33642
CG43924
CG43923
CG33641
CG33640
conu
Pp1-Y2
CG4116
CG4174
CG17570
CG43861
CG17493
term
CG7271
CG18234
CG12426
5-HT2B
CG12479
CG34201
CG34202
lectin-24Db
TBCC
Lar
CG9254
mamo
PVRAP
alphaKap4
Cyp6a9
Cyp317a1
Cyp6a8
Cyp6a20
Cyp6a21
Mrtf
unc-13
CG2121
CG34324
atms
tacc
Cyp12a5
Cyp12a4
shot
CG3987
CG6912
CG3984
CG42788
Eip78C
ATbp
brat
CG40228
colt
HINT1
CG15399
stw
Cda4
for
CG6051
CG34274
CG4520
spdo
PH4alphaSG2
Jon99Fii
Jon99Fi
Duba
CG42832
Muc68Ca
CG6083
Akr1B
Muc12Ea
CG9400
mtDNA-helicase
RpS2
Bka
vvl
CG14693
CG13124
TTLL15
CG3520
Muc30E
Cenp-C
CG30411
CG14692
Gpb5
Tim23
CG32816
Pgcl
mRpL24
betaggt-I
CG14044
hoe1
hoe2
Sgs1
CG7548
CG7546
eIF4E1
CG4080
Cyp4d8
CG8539
Cyp316a1
Set1
CG12362
pk
Ir11a
CG17290
CG17287
CG30458
CG30457
CG2577
CG10949
Arpc2
CG10947
CG14947
firl
CG46443
pan
inc
CG14795
AGO2
SCCRO
CG7739
MFS9
dop
Ir67a
Obp18a
CG13471
Nedd4
Edc3
U4-U6-60K
CG7564
CG10417
CG17944
CG40045
CG12679
CG42673
ab
CG12480
stg1
CG11566
Ent1
sky
Spt3
DCAF12
ssp5
CG42505
CG42504
CG31358
Sod1
TM9SF4
APP-BP1
Iyd
Irbp18
CG46439
CG33947
Elo68beta
Elo68alpha
CG32073
CG12522
CG32071
CG7638
CG34012
dsx-c73A
Pde11
Mob2
CG7394
CG15160
CG46412
CG33267
CG33490
jing
fusl
CG12512
nompC
Abd-B
VhaM9.7-d
Actn3
DJ-1alpha
sick
Rubicon
CAH3
Spn
CG32295
Svil
kirre
N
CG42700
Su(var)2-HP2
Sec61beta
Had2
CG12863
CG10481
Cam
Neu2
CG7519
CG7202
Ptpmeg2
CG3106
CG8119
CG8117
Fancm
Pde1c
mof
Usp30
CG16721
croc
CG16762
mRpS33
ema
CG17565
CG14881
CHES-1-like
CG15478
wgn
CG31279
Socs16D
CG12986
Indy
prage
Adar
crol
CycY
Nc73EF
Cpr73D
pkaap
crp
Cyp303a1
CG17329
CG13258
CG33226
CG30287
CG30286
CG30283
stl
blw
CycB
CG42260
CG30271
Npc2b
CG9920
CCHa1
slbo
bs
lace
CG8945
CG4955
nej
btd
Ubr1
Shmt
CG3726
CG12236
wcy
CG4949
CG43077
RpS21
CG3117
CG3104
CG2991
CG2983
CG4020
Act5C
CG14762
Tsp68C
Hml
CG8757
CG8750
CG43184
siz
Odc2
Odc1
Dys
CG31191
Atpalpha
nAChRalpha6
Fkbp59
CG4537
CG34183
lectin-46Cb
lectin-46Ca
CG34033
CG1648
PDZ-GEF
Sur-8
CREG
mthl14
E(bx)
Lasp
Dab
CG9692
CG43954
SNF4Agamma
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
CG9171
Fmr1
Drgx
CG9380
cmpy
CG34260
CG15429
Atet
GILT3
GILT2
CG15025
CG15919
EbpII
Ebp
beat-IIIc
obst-E
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
fal
Gbs-76A
CG14186
CG14185
CG13192
sNPF-R
Wdr62
SPE
Scp2
CG14903
CG14891
gol
CadN
Toll-7
eIF3d1
CG18754
CG16710
rtv
Ran
Lint-1
Dlic
CG32668
CG1688
CG15201
LanB2
CG3335
CG15615
Eip75B
ms(3)K81
SPARC
Rb97D
CG5500
nol
NaPi-III
CG32074
Got1
CysRS
CG30094
Tlk
CG31663
CG15358
wdp
ind
Rpn12R
CG43678
Mtpalpha
GABA-B-R3
Eaat2
zip
uzip
jp
brwl
Mst36Fb
CG43339
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
CG9497
CG43338
CG13280
CG13272
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
sced
geminin
Opbp
Dpit47
Adf1
mRpL2
Ufd1-like
FoxK
Sr-CII
RpS11
CG8858
CG10365
Eh
CG14331
CG14330
larp
ham
CG13962
stg
SP1029
CG45544
CG31445
CG9410
CG15908
nau
CG10232
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
viaf
Pop2
Grip163
CG6928
mdy
Cse1
stc
CG15269
Rrp46
Irp-1B
CG6345
CG6325
Asator
CG5890
CG5886
CG14545
CG13465
BobA
RpL37a
CG12730
CG5565
CG5561
CG5556
CG31924
CG6118
HisRS
Ggt-1
CG6470
Bx
Spn28Db
Spn28Da
SmE
CG7102