ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX085405 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◣ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Rbfox1
CG13465
BobA
Mtpalpha
jp
brwl
gcm
CG31709
Hk
Eh
CG14331
CG14330
mthl8
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
SP1173
CG8519
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
CG31064
CG42814
CG31068
CG42813
Rlip
CG5697
CG17278
MBD-R2
CG4115
CG10041
CG10038
CG44956
CG46468
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
galla-2
OXA1L
CG6418
CG6409
Blos4
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
eya
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
Ca-beta
Vm32E
CG4788
cher
nerfin-2
CG33784
Alp13
CG33783
Spn28Db
Spn28Da
SmE
CG7102
CG34132
Ten-a
Usp7
Cyp318a1
Cyp311a1
CG32461
Oatp30B
Cpr30B
CG17855
CG13114
CG13113
CG14459
CG9171
obst-E
beat-IIIc
CG14186
CG14185
sNPF-R
GNBP2
Capr
CG42495
GNBP1
Spt3
DCAF12
ssp5
CG42505
CG42504
CG31358
GlyP
CG4259
CD98hc
Sfp84E
Os-C
Abd-B
CG14762
Odc2
Odc1
dnc
Wnt4
flz
betaTub60D
Lmpt
CG32170
Calx
CG43446
CG31275
CG6118
Act88F
lectin-28C
TwdlE
CG14535
cmpy
CG34260
Cpr100A
CG15546
CG15545
CG43055
TfAP-2
mof
Usp30
CG16721
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
Nepl19
Nepl18
Nepl17
Tsp
cort
Nse1
Nhe3
CG11327
Snp
CG44249
CG13501
CG13500
SIFaR
Or67d
can
CG32117
CG12520
siz
Npc2b
CG9920
CCHa1
PK1-R
CG12402
Wdr62
sm
CG43277
CG42753
CG18367
CG15124
RhoGAP100F
Rift
FeCH
CG42233
CG1971
mRpS33
ema
CG17565
CG14881
CG31279
Gycbeta100B
CG15556
CG15554
CG5906
Sprn
CCDC151
tna
larp
Or98b
Moca-cyp
Gfat2
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
CG14270
CG12206
CG10804
CG10803
CG10802
stl
blw
CycB
CG42260
CG30271
CG42327
CG14715
2mit
mthl14
E(bx)
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
obe
Trissin
CG5213
CG4593
CG3032
cm
CG42308
CG32736
scyl
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
CG11664
CG14634
ome
CG4914
CG43121
prage
Adar
mthl2
TM9SF3
Eaf6
CG10591
TotX
Grik
hdly
tzn
Spc105R
Six4
CG3698
east
PIG-K
Egm
CG9005
nuf
CG7924
CG7906
CG34244
Mp
lace
CG13280
CG13272
mdy
Cse1
CG42784
PGRP-LC
PGRP-LA
Cyp12e1
CG46270
DCX-EMAP
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
CG2199
Ptp61F
312
CG10139
Adgf-E
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
CadN
fra
CG8818
CG8569
CG33632
achi
CG13151
CG14417
CG14416
LanB2
CG3335
pan
viaf
Pop2
Grip163
CG6928
stc
CG15269
CG1077
Osi1
sick
CG13962
CG44837
tkv
Cyp4ac3
Bub1
Bsg25D
Picot
CG34458
CG34457
CG3603
CG17959
CG14423
CG14422
CG14421
VhaM9.7-d
Actn3
Syn2
Indy
Spn
CG32295
CG14082
CG9743
RpS7
CecC
CecB
CecA2
CecA1
Anp
Spn75F
glu
LSm7
ChLD3
BuGZ
dnt
CG13086
CG17349
SNF4Agamma
zyd
CG12061
CARPB
CG1354
CG10365
nau
CG10232
abd-A
CG13481
mdlc
CG4390
Ent3
CG32107
CG10943
CG31324
CG6142
Nc73EF
Cpr73D
Cyp308a1
Got1
CysRS
CG30094
Mes2
alphaSnap
Spn77Ba
Spn77Bb
polo
Cpr76Bc
Cpr76Bb
Cpr76Ba
ncm
RpS26
Dscam1
trio
CG9205
PCB
Ntmt
CG46338
CG30010
Lime
CG12744
Asator
CG5897
Kank
Lap1
CG12853
ADPS
CG10257
ver
nst
eIF2beta
Tsf2
Pmm2
Gcn5
CG34242
CG15429
Atet
CG9705
CG13025
Nrt
CG31036
CG15517
CG15515
CG31038
CG12617
CG3638
CG11403
CG12009
CG12017
ftz-f1
CG3355
kay
shot
DJ-1alpha
CG42346
CG31663
CG15358
CG43271
CHES-1-like
CG15478
Usp47
DnaJ-1
bcd
Ama
zen
FucTA
Pex3
Pdi
CG32147
CG12316
Pcf11
Cyp6a23
Cyp6a22
Cyp6a19
Cyp6a17
Cyp6a9
CG15919
CG15615
CSN3
CG3288
CG13255
CG11456
rdgC
CG32228
Neu2
CG7519
CG7202
croc
CG15373
CG9497
CG9498
ppk7
ppk14
CG9500
sky
RPA2
Mtp
CG9272
CG43739
CG10481
Prp31
Msh6
CG7011
CG6878
capu
CG17193
tx
CG6503
CG34291
Ptpmeg2
CG3106
Scp2
CG14903
CG14891
wts
dj-1beta
cindr
kra
asl
SecS
Rga
Atu
slim
Ttd14
CG5189
CG30120
Prp19
rswl
CG17669
CG31787
Sfp36F
CG43362
CG5790
CG8945
CG4955
Shmt
CG3726
CG12236
wcy
CG4949
CG43077
CG4020
Act5C
RagA-B
CG11970
CAHbeta
Svil
CG16762
CG9593
alpha-Man-IIb
Vago
CG2076
sev
tub
CG34112
CG14646
spel1
mTTF
l(2)34Fd
l(2)34Fc
Send2
Rab14
Pgant35A
CG43052
CG9855
CG9853
lost
CG14647
Myd88
CG42680
Rrp46
Irp-1B
CG6345
CG6325
GCS2alpha
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
wdp
Gp150
Pax
CG13085
Alp12
lectin-37Db
lectin-37Da
Lectin-galC1
Fancm
CG16898
CG12007
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
Tak1
CG42579
RpI135
CG4213
CG18063
chif
CaBP1
CG4455
CG42231
CG44405
CG42266
CG12448
Su(var)2-HP2
Sec61beta
Had2
CG12863
Gr89a
Decay
Cad89D
CG42342
Oaz
phyl
CG31821
Tep1
CG31823
CG31735
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
Dys
CG15025
Rubicon
CAH3
CG42268
Ubr1
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
lab
Edg84A
Ccp84Ag
Ccp84Af
Ccp84Ae
Ccp84Ad
Sr-CII
RpS11
CG8858
Ldh
CG10163
Best2
Vsx2
CG43980
Galphao
CG12895
ORMDL
MED1
CG32445
CG32444
Atox1
CG8119
CG8117
dco
Chchd3
Sox100B
Pde1c
zda
CheA56a
CG30122
nol
NaPi-III
CG32074
Sod1
mRpL2
Ufd1-like
FoxK
CG14947
Hers
prd
amn
Pex19
CkIIalpha-i3
CG13896
CG13895
Gug
CG6983
Unr
Panx
CG9485
CG33655
CG30394
CG12782
sr
PDZ-GEF
CG1902
CG30339
GstT2
GstT1
CG12926
CG9380
EbpII
Ebp
TAF1C-like
MESK2
Fkbp14
CG46395
CG6330
Spag1
Tsp97E
Gr97a
Men
CG12502
dpr20
Dci
sens
flr
CG10222
CG8301
CG33654
CG16789
CG9399
CG9396
CG16790
Son
Kap-alpha3
Fs
scb
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
cnn
cbs
CG30062
bun
CG3358
hwt
CG8490
Den1
CG8839
CG34021
garz
CG8841
ana3
raskol
Mbs
Diap1
Smyd5
Oga
Nelf-A
CG5862
CG3337
CG34313
CG32832
CG31743
RpS21
CG3117
CG3104
CG2991
CG2983
tow
CG14820
CG5890
CG5886
CG14545
Gr98d
Gr98c
Gr98b
CG34007
CG33927
for
Drgx
CG6163
CG43693
CG7888
Tlk
Rala
Rab9E
CG2111
Tsp68C
Hml
CG8757
CG8750
CG43184
zip
uzip
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
CG12992
CG12991
Ankle2
CG43332
crol
CycY
CG4161
CG6184
CG6195
CG31220
CG31219
subdued
Vha13
Nup58
nmdyn-D6
mRpS25
CG14414
sbm
kirre
N
cpo
Rim
CG43445
Ubc10
CG5033
aft
CG6362
fab1
CG33981
CG14383
Paip2
CG7381
CG7091
CG31342
AP-2alpha
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
ex
wgn
goe
Twdlalpha
TwdlZ
CG32568
CG4603
CG4597
CG15213
CG15212
RpS15Aa
Jafrac1
IP3K2
CG15747
CG4991
CG16700
Nepl16
CG34027
CG45095
CG1428
CG1421
CG11629
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
par-1
CG7509
CG18808
CG11873
RpLP2
CG8311
CG8306
CG8303
CG5089
fal
Gbs-76A
ssp6
CG6610
CG13295
CG13293
beta3GalTII
Vps25
Gle1
CG8635
Cirl
CG8642
snu
Sid
CG33346
CG33226
CG30287
CG30286
CG30283
CG7857
CG7272
CG7276
CG7275
CG13455
CG12355
Ran-like
Fmr1
RpL37a
fl(2)d
CG6329
CG13339
CG6347
CG6337
CG42700
Cam
Gmap
CG6340
pzg
ppl
Cpr78Cb
Cpr78Ca
CG12974
AcCoAS
RapGAP1
Gr58c
Gr58b
CG9304
CG34029
Gr58a
ppk9
scrib
plum
mRRF1
UGP
Pdxk
CG34456
CG32039
PGRP-LF
CG32040
Sox21a
Lasp
Dab
CG9692
CG43954
TwdlC
RYa-R
CG31076
CG31075
CG14253
CG31077
mud
mRNA-cap
Fbxl4
CG32599
CG1434
Gr59d
shep
CG13538
RpL37b
Gr59c
CG42703
CG9876
inv
CG44437
sno
REG
bt
velo
Ist1
CG8549
dikar
Rsph3
RtcB
Rab9
stg
SP1029
CG45544
CG31445
CG5062
su(w[a])
TfIIA-S-2
CG14631
Ndae1
CG31909
CG13786
insv
Elba2
ND-B17.2
Arpc5
Drp1
CG15394
CG12780
unc-5
Hr51
CG43658
Pez
Cpr
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
CG42853
Tao
CG14219
CG14205
CG14218
CG14204
Loxl1
CG11334
CG11333
CG34274
nxf4
CG43290
CG31496
ham
CG42749
Tpst
CG46311
CG32633
CG32631
CG11816
sbr
Imp
CG15210
CG15209