ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2010897 | Embryos
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◣ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Ppr-Y
CARPB
CG1354
Ptpmeg2
CG3106
CadN
snu
Sid
CG33346
cmpy
CG34260
CG1077
Osi1
Cpr76Bc
Cpr76Bb
Cpr76Ba
unc-5
Hr51
sbr
Imp
CG15210
CG15209
Rubicon
CAH3
Dys
CG15025
TwdlE
lectin-28C
CG14535
CG8119
CG8117
Shmt
CG3726
CG12236
CG4020
Act5C
Abd-B
VhaM9.7-d
Actn3
slbo
bs
Spn
CG32295
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
wgn
Npc2b
CG9920
CCHa1
CG43980
soti
prage
Adar
CG42700
Cam
l(1)sc
TfAP-2
CG14186
CG14185
sNPF-R
Tak1
CG42579
Sox21a
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
CG7794
DNaseII
CG7785
Ldh
CG10163
Best2
nxf4
CG43290
CG31496
CG31275
stl
CycB
CG42260
blw
CG30271
Usp30
mof
CG16721
raskol
GAA1
Tlk
Rala
Tsp68C
Hml
CG8757
CG8750
CG43184
Spn28Db
Spn28Da
SmE
CG7102
CG34132
Ipk1
Cib2
Tpst
CG46311
CG32633
CG32631
CG11816
Socs16D
CG12986
CG6398
N
kirre
CG14762
Odc2
Odc1
CG15919
CG15615
CG5568
CG18586
CG44439
CG30369
CG2291
CG14760
CG14759
RpS2
mtDNA-helicase
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
Mef2
betaTub60D
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
Neu2
CG7519
CG7202
croc
sick
CG13962
CG34165
CG15282
CG12730
shot
DJ-1alpha
CG6118
Act88F
CG10481
CG3556
lace
Fancm
Ent3
CG32107
CG10943
for
Drgx
Fmr1
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
CG15429
Atet
Fs
scb
bcd
Ama
zen
Scp2
CG14903
CG14891
dar1
CG14974
CG10359
CG10357
Pde8
retn
CG9380
EbpII
Ebp
Svil
CG16762
CG34435
CG34434
RhoGAP5A
Pop1
Mlc-c
Esyt2
Ubr1
mRpS33
ema
CG17565
CG14881
CG31279
shop
htk
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
nej
btd
Gr98d
Gr98c
Gr98b
CSN3
CG3288
CG13255
CG11456
Cpr100A
CG15546
CG15545
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
RpLP2
CG8311
CG8306
CG8303
CG5089
CG43693
CG7888
PDZ-GEF
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
Or67c
dila
CG30001
CAH15
otp
Rx
Wnt4
CHES-1-like
CG15478
CG3358
Nc73EF
Cpr73D
ftz-f1
sim
CG43063
timeout
CG16898
Rlip
CG5697
CG17278
CG12007
CG14082
fz2
flz
ftz
Scr
EcR
CG31960
bowl
bark
sens
flr
CG10222
Mst36Fb
CG43339
CG43338
CG42268
Indy
CG42680
Gbs-76A
fal
sm
CG43277
CG42753
CG18367
CG15124
TotX
Grik
hdly
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
LSm7
glu
ChLD3
BuGZ
siz
chn
dco
Chchd3
Sox100B
LanB2
CG3335
CG32461
RpS21
CG3117
CG3104
CG2991
CG2983
CG18557
CG43332
Lcp65Ag3
l(3)mbn
Cpr65Au
Lcp65Ag2
Eh
CG14331
CG14330
Ca-beta
Vm32E
CG4788
Lcp65Ag1
CG10365
nau
CG10232
wdp
Gp150
SNF4Agamma
upd2
CD98hc
Sfp84E
Os-C
CG13465
BobA
CG13280
CG13272
mdy
Cse1
InR
Got1
CysRS
CG30094
fuss
toy
CG43066
CG42346
CG42784
TM9SF3
mthl2
Eaf6
CG10591
Glut3
CG9171
obst-E
Act57B
Cyp12e1
CG46270
elav
CG4293
Appl
CG14383
Paip2
CG7381
CG7091
CG31342
Rrp46
Irp-1B
CG6345
CG6325
CG3638
CG11403
ham
CG8945
CG4955
wcy
CG4949
CG43077
RagA-B
CG11970
CAHbeta
pkaap
Cyp303a1
crp
CG17329
CG13258
viaf
Pop2
Grip163
CG6928
sced
Opbp
geminin
Dpit47
Adf1
CG9410
CG15908
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
CG8180
mthl14
E(bx)
mdlc
CG4390
CG17193
mtSSB
CG6126
CG31287
nol
NaPi-III
CG32074
CG43658
Sod1
Ufd1-like
mRpL2
FoxK
Kank
Lap1
CG12853
ADPS
CG10257
CG15040
RapGAP1
Wdr62
CG31663
CG15358
Su(var)2-HP2
Sec61beta
Had2
CG12863
dan
lobo
CG13654
CG13653
CG43867
CG3713
CG14635
Picot
CG34458
CG34457
GABA-B-R3
Eaat2
RpS28a
Mgat2
CG7920
Axn
CG8301
CG33654
CG16789
CG9399
CG9396
CG16790
Son
Kap-alpha3
vig
vas
TfIIS
solo
CG33679
ck
CG13192
Timp
CG14459
shd
HGTX
CG12617
Mes2
CG9988
CG10011
CG14062
gol
Cyp12d1-d
BBS4
CG13229
CG5890
CG5886
CG14545
HisRS
Ggt-1
CG6470
Bx
CG6481
TfIIA-S
tbrd-1
Pli
ome
CG4914
CG43121
mRpL13
CG10602
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
cnn
CG30062
cbs
SPARC
Rb97D
ms(3)K81
CG5500
Lerp
IntS12
His2Av
ball
Oaz
phyl
Pde1c
CycY
crol
fra
CG8818
CG8569
CG33632
CG13151
achi
Srpk79D
Csp
CG11523
Rich
Ddx1
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
Mtpalpha
jp
brwl
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
gcm
CG31709
Asator
Zasp66
Cdc6
GAPsec
S-Lap2
Lk
CG34039
CG42758
larp
Or98b
Moca-cyp
Gfat2
CG31191
Atpalpha
PIG-K
east
tapas
MED8
CG8929
Ref1
Dpck
CG1943
Ufl1
CG1965
CG1105
Tsp
Nse1
Nhe3
cort
CG11327
FucTA
Pex3
Pdi
CG32147
CG12316
CkIIalpha-i3
CG13896
CG13895
CG9497
CG9498
ppk7
ppk14
CG9500
CG43153
CG14930
Dlg5
CG4970
CG14929
CG7956
stc
CG15269
Lasp
Dab
CG9692
CG43954
Eglp4
Eglp2
Eglp3
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
CG7509
CG18808
Patj
JTBR
dlt
CG42676
CG12020
Cdc37
alpha-Spec
CG34268
CG34267
dnc
Cyp308a1
cpo
Rim
CG43445
Gsc
CG13689
ush
CG12502
dpr20
Dci
Ndae1
CG31909
CG13786
mtd
Tim17b1
Reg-2
CG13893
ORY
pzg
ppl
Cpr78Cb
Cpr78Ca
CG12974
AcCoAS
Trissin
obe
CG5213
Rh6
zfh1
RpL37a
CG2841
Raf
mRpL14
Ilp6
Prm
Fhos
CG6576
CG13306
par-6
CG8188
chas
fz3
CG16989
CG13360
tw
scramb1
CG8065
CG32055
Sr-CII
RpS11
CG8858
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
Pglym87
Cyp6t3
Jupiter
CG6808
CG14711
CG14710
CG10324
CCT3
CG14907
CG14906
modSP
tkv
Cyp4ac3
Bub1
Bsg25D
vri
vir-1
SC35
eRF3
CG6405
CG6388
CG5446
CG5435
SRPK
dup
Pms2
Ttd14
slim
CG5189
CG30120
Prp19
rswl
CG17669
dnd
CG6678
CG43844
fit
CG31465
CG17819
Trx-2
GlcAT-S
gcm2
RpS15Aa
Jafrac1
IP3K2
CG15747
Poc1
ImpL1
CG14110
CG14107
CG10171
GNBP2
CG42495
Capr
GNBP1
Cndp2
scaf
vlc
Pez
Cpr
Mbs
Diap1
ssp6
CG6610
CG13295
CG13293
zip
uzip
Ppn
mIF2
CG14270
CG12206
CG10804
CG10803
CG10802
Zasp52
CG33465
CG3355
CG12496
gt
CG32797
CG31036
CG15517
CG15515
CG31038
spel1
Send2
Rab14
Pgant35A
mTTF
l(2)34Fd
l(2)34Fc
CG43052
pdgy
eag
CG9030
Rpn12R
ind
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
dnt
CG13086
CG17349
RhoGAP100F
Rift
FeCH
CG42233
CG1971
Egm
CG9005
CG9777
SNRPG
RpS19a
Rok
mthl1
Osi7
Osi9
Osi8
Osi10a
Usp47
DnaJ-1
GCS2alpha
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
velo
Ist1
CG8549
dikar
Rsph3
Snp
CG44249
CG13501
CG13500
Myd88
CG9018
ACXD
Oseg2
CG32301
AP-2alpha
RpLP1
ebi
CG13692
CG13690
CG11885
BBS8
ex
Or43b
MFS12
Kdm4A
Cul1
CG12159
CG14688
CG6465
CheB93b
CheB93a
Ugt49B2
CG7907
waw
Sep1
bbx
MCU
CG15130
CG10949
Arpc2
CG10947
Eip75B
TyrRII
CG14321
Lgr1
Atg8b
CG33557
CG2990
Cht6
scrib
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
Lk6
l(3)neo38
SIFaR
smash
eIF3f1
su(w[a])
TfIIA-S-2
CG14631
CG7763
CG34054
CG30026
CG5819
Smyd4-3
pk
CG33140
CG30385
CG30384
retm
Rchy1
frj
CG9527
Mipp1
CG43206
CG4229
CG13323
CG13324
CG33226
CG30287
CG30286
CG30283
stg
SP1029
CG45544
CG31445
Rgk3
ASPP
CG12009
CG12017
Pcf11
Cyp6a23
Cyp6a22
Cyp6a19
Cyp6a17
Cyp6a9
Sfp26Ad
Gpdh1
CG9044
Vm26Ac
Vm26Ab
CG13999
CG13998
mRpL55
CG6040
cdi
ATPsynD
rols
Gr59d
CG13538
RpL37b
Gr59c
CG42703
CG9876
Tbce
SCAP
CG14591
CG34211
sigmar
l(2)dtl
CG5504
Alg3
Sesn
CG46429
CG18128
Mst89B
bor
asun
Cda5
galectin
dbr
CG11374
lab
Edg84A
Ccp84Ag
Ccp84Af
Ccp84Ae
Ccp84Ad
Gr89a
Decay
CG42342
Cad89D
Sox102F
fd102C
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
Obp99d
Dup99B
Pax
CG13085
Alp12
Lectin-galC1
lectin-37Db
lectin-37Da
beat-IIIc
CG33128
CG31928
CG31926
CG31661
CG18131
SecS
kra