ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059713 | VCaP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◣ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

PMF1-BGLAP
PMF1
RAE1
MTRNR2L3
PRICKLE1
PASD1
MAGEB10
HERC3
PYURF
PIGY
ARHGEF7
SLC45A4
KDR
NUDT3
FBXO46
MEIOSIN
DUX4
ZBTB7B
LENEP
NOS2
ARID3B
SCGB3A1
SLA
RTF1
ASIC2
MAMDC2
DNPEP
LGALS8
GSTP1
BHLHE40
NGB
MESP1
CALML5
PMM1
APBB2
TENT2
BCL2L13
GRM3
SEPTIN9
PPP1R14B
LOC114841035
FKBP2
VEGFB
DNAJC4
RUVBL1
EEFSEC
CXCL8
CDH4
FRMPD1
APP
UMODL1
LOC102724770
DGCR6
NLRP5
EAPP
IL24
KSR1
SMYD1
KRCC1
SLC2A10
LFNG
SCML1
ACSL3
CREB3L1
TNK2
LAMA3
MRPL24
HDGF
PPP1R15B
APOLD1
SELENOS
MCF2L
HERPUD2
HIGD1C
KCNQ3
GABRA2
SCUBE3
PTTG2
ZBTB18
SYCP2
FAM217B
PRDM14
TMEM40
TMEM216
SAXO2
EFL1
COL28A1
TSGA10
RTL1
PCDH7
ZNF511
TUBGCP2
NFIC
CDKN2AIP
ARNTL
NPTX2
UTRN
TBL1X
FMN2
AGPS
SASH1
SCIMP
PDGFA
CFAP74
RHOT2
RASGEF1A
POLR2J2
FKBPL
ATF6B
UGT2B10
EXPH5
EIF4EBP1
POLR2J3
TMEM262
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
ISX
ZIC5
GDF15
PTPRN2
HDGFL2
ITLN1
ETV5
GRAMD1A
WDR74
STX5
LOC388282
FAM214A
ITGB5
MTNR1A
MTRNR2L1
PXDN
SOCS2
GHRHR
SUPT7L
SLC4A1AP
LIMA1
OR13G1
SCNN1D
JPH3
BDNF
RHOH
DUSP6
MBOAT2
IFT43
TGFB3
MUSK
LPCAT3
SBSPON
DMD
DGKK
AFAP1
ATXN2L
PLIN1
PEX11A
WDR93
HEG1
B3GALT5
NOVA2
SLC16A8
STAU2
PHTF2
TMEM60
PPDPFL
CCZ1
ERCC1
CPSF1
HMGN4
SKIDA1
TLK1
TM7SF2
TMEM42
TGM4
MSX1
DAB1
MPP1
KCTD7
NBPF1
RSPH14
RAB36
PDXK
KANK1
ARHGEF3
PRRT1
PPT2
SCAMP2
TPRA1
CPLANE1
KIAA0408
RAB37
KRT3
ALDH3B2
MUC3A
FOXN1
MAX
C19orf12
TIMP2
OXGR1
MBNL3
TACR1
FAM222B
LNX1
DDX19B
AARS1
PYCR2
KCNH8
DPP9
AGFG2
TMEM87A
GANC
LGI1
COL21A1
PALLD
MTERF4
RFPL3
ZNF771
ARHGAP22
ATP5MC1
UBE2Z
SPAG9
MX1
COA3
CNTD1
PTPRR
NBPF4
TRIM48
STX16
SHLD2
GLUD1
CDCA7L
SOX8
PEX10
NUDT10
MAGEA10-MAGEA5
MAGEA10
TPCN1
FAM234B
UGT2B28
ACSBG2
STK32A
FBXL3
UNC45B
NLE1
REG1A
OR6V1
CACNA1D
TBC1D30
GNS
EDARADD
RRBP1
BANF2
PFKL
MLF1
RB1CC1
DPRX
OR1L1
STC1
TMEM217
TBC1D22B
MMP17
MFSD4A
LGALS7B
SHOX2
RSRC1
NUP160
LAX1
FAM3C
TFF1
MTRNR2L8
CCDC200
ZNF559-ZNF177
ZNF559
FNDC10
PFKFB3
ELOVL7
C1QTNF9
ZCCHC14
MAPK11
SORL1
NFIX
ITPRID1
KLHL29
MAPK12
XRCC4
TMEM167A
HIVEP1
ATAD2
SUSD4
SPDEF
SGK3
TEPSIN
NDUFAF8
MAP7
CPLX1
TYW3
CRYZ
C3orf14
SERPINA5
MTRNR2L2
MSH3
DHFR
ART1
CITED4
SPOCK2
EPHA4
ZNF155
CCDC34
PIWIL1
ZZZ3
ARID3A
SEC13
KRT4
GLYATL1
IMPDH1
TMED9
B4GALT7
DIPK1A
DPY30
FOXN4
TMEM268
USP36
GPT2
WIZ
LRRC25
SYNE1
SYK
TMSB15A
GPR173
LSAMP
OR2W5
COG1
MEIS2
SCNN1A
LTBR
DAPK1
GNAT3
MYO7B
UNC13A
ST6GALNAC6
ST6GALNAC4
IWS1
VAV3
HMOX1
C1orf198
CYB5B
SAMD12
MRAP2
SIRT4
CHAC1
PYGL
CNP
IFRD1
SSH3
NBPF6
CEACAM5
SRI
COL23A1
SPHK2
DBP
MYH10
PRKAG2
NR2F6
MICALL2
OCEL1
RBM10
NDUFB11
OTOL1
NBR1
RAB32
KRT39
SKIL
ESRP2
TAOK3
MDGA2
PNMA6A
PAX6
HEY2
DHRS3
CNKSR3
SGK1
SLC9A3R2
TSC2
NTHL1
TMTC2
LHCGR
ZNF845
HMGN1
SPDYE2B
SPDYE2
UPK3BL2
FNIP2
RND3
IRF2BPL
CPA6
TRIQK
UPK3BL1
EI24
TMEM237
DAOA
RGS19
OPRL1
LKAAEAR1
PAFAH1B2
ADAMTS3
POU6F1
MARK2
RPS27
RAB13
ANGPT1
NWD1
TASOR
SPIN1
RGPD2
RGPD1
C6orf58
LRRC32
MRPL1
ECE1
WDR77
ATP5PB
TLE4
FFAR2
AKAP12
GAREM1
WRNIP1
MYLK4
VPS45
CDC16
CPT1A
CYP3A43
IAPP
PKP2
VAT1
RND2
PARP1
FBXW8
TBCEL-TECTA
TBCEL
GZMB
SH2D6
CAPG
KRTDAP
CD8B
TBPL1
EPHA5
ITSN1
CRYZL1
QSOX1
ELAC1
RFESD
ASPHD2
RGL3
GYS2
ELANE
CFD
B4GALT2
TLE3
ZBTB20
CCDC24
ERICH5
CCDC190
TFCP2L1
DMRTA1
FAM25E
BACE2
KCNIP2
IGFBP7
VPS37C
TMEM106B
STPG3
NELFB
FAM166A
ACY3
LAPTM4B
IER5
CMTR2
MTFMT
HAAO
ARHGEF38
MYO1G
NR3C1
RXFP4
KHDC4
RUFY3
BUB1B
MGAT5
THAP9
SEC31A
SNIP1
DNALI1
SOD2
CPEB4
XDH
C11orf80
CD177
B3GNT6
TIAM2
TMEM92
GDA
RIN2
FAM53C
CDC25C
ELMO2
TMEM62
SLC30A8
PIWIL3
AARD
DCDC1
MEF2A
S1PR1
FRG2
ZNF207
C17orf75
PRSS23
FREM1
KLK3
LINC01638
PRMT8
LDHC
GUCA2A
SZT2
MED8
SMIM13
CDC42EP3
MTFP1
IGIP
C7orf65
TSPAN5
CAPN5
MMS22L
MAPK9
RND1
TMPRSS12
VAMP2
PER1
PRKAR1B
CA1
SLC30A4
CHST7
SIDT1
SLC35F6
SUGCT
MPLKIP
ACACA
SSTR5
MED14
NIBAN2
SMIM34A
FRG2C
FLOT2
DHRS13
ENPP2
NUDT16
EPHB3
MTHFS
PLAAT3
HERC5
TNFSF15
RTN3
ATL3
PIK3AP1
PANK1
SLC36A2
CADM1
RNF19A
C2orf73
SLC25A45
FRMD8
AHCY
LTA4H
ERICH2
TES
ARID5A
FAM178B
GAL3ST1
COL2A1
TMEM39B
PPFIBP2
LDLRAD4
NEK10
ZNF200
KLHL9
IFNA6
SEMG2
ZMYND8
RAB11A
FBRS
CBFB
LAMP3
ERGIC1
DOCK9
DCAF8L1
CTXN3
IRS2
CDRT4
GGA1
ADRA1B
SUN5
NKX6-3
BPIFB2
NR1D1
CTRL
C11orf24
PPP2R2B
ELL2
ARHGAP40
FAM25A
SIVA1
LITAF
CHD9
ASPN
PPCDC
RDX
TRAPPC4
RPS25
OTULINL
SLC37A4
MB
PRR7
DBN1
CA8
PRKCD
STARD13
MAP2K6
CMBL
TMEM14A
LDLRAD1
HSPA4
MIA3
OR4C3
KAT6A
CLIP1
MALL
JRKL
CCDC82
REXO2
TDGF1
PTPN3
KLRK1
FURIN
CYRIB
TMEM11
TACC2
SRSF10
TCIM
NOXA1
SLCO4A1
PRRC2B
LRRC69
TMEM45B
EPN1
ST6GALNAC3
PLA2G3
INPP5J
GRHL2
TJP2
MSH5
DDAH2
CLIC1
PHKA1
BIK
SPRED2
MACROD1
MKNK2
DNAH5
PMVK
FAM47E-STBD1
FAM47E
CDS1
AMBP
BCL6
CEP85L
PIP5K1B
PIWIL2
ZNF541
PRLHR
CELA3B
DNAJB4
NAV3
SCRN2
ATP6V1E1
FAM25G
FAM25C
CERK
SP6
KIAA1217
LINGO1
ATP6V1G1
SPAM1
EMC4
KATNBL1
THSD4
ADAM17
POU5F2
GFRA3
FCGBP
CELA3A
EBAG9
PRIM1
HSD17B6
MMP8
ACOX2
SOCS7
KIAA1522
CHD2
FGF19
ING1
CARS2
BCL2L1
TMPRSS11F
SLC39A13
IL17RD
SLC2A5
DAPL1
TEX38
TSG101
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
FAM240C
TSPAN9
STAT2
APOF
PRSS27
TMEM210
LRRC26
AFF1
GMNN
TM9SF3
RAPGEF3
ARSG
TCP11L2
SLC16A6
TTC3
PIGP
PRELID2
SLC48A1
NEURL1B
KLF9
NFKBIL1
DDX39B
ATP6V1G2
ZNF619
THRSP
RIPOR2
FNTA
MAP3K4
UTP20
SPTLC3
YBEY
MCM3AP
CAMK2N1
FBXO32
HELB
GPRC5A
OR51G1
GGACT
DSG4
POLDIP3
PNLIPRP1
SOAT1
NREP
IKZF3
MYEOV
HEXA
ERBB2
GABARAP
MRPL11
PNMT
PHF23
DVL2
MIEN1
GRB7
LAMP1
ALDH18A1
HNRNPA2B1
CBX3
SLC39A10
GET4
ELP5
CTDNEP1
WDTC1
AP5Z1
EPC2
DDX17
EIF4G2
STRBP
TMEM199
SEBOX
POLDIP2
SLC25A25
NAIF1
WASHC2A
SEPTIN7
RNASEH2C
KAT5
KIF5C
TCAP
WASF2
MRPL45
ERAL1
ID1
WASHC2C
HAGH
FAHD1
SPATA25
NEURL2
CTSA
UBE2Q1
CHRNB2
SFSWAP
TSPAN31
MARCHF9
KCNK4
GPR137
CDK4
BAD
SERPIND1
PGAP3
GSK3B
ZSWIM1
TET3
UVRAG
NAGPA
SPNS1
ATP6V0D1
AGRP
CD300LF
RSF1
AAMDC
LAT
MSMO1
CRBN
RBBP8NL
UBE3B
KCTD10
DAGLA
RPGRIP1L
FTO
TRMO
RBM48
PEX1
MTRNR2L9
ARL4D
PSMD3
ASB2
MTBP
MRPL13
MDM2
LTBP2
PTPRF
RALGDS
BCL3
RPS6KC1
FAM72D
FAM72C
SUMF1
RPUSD4
FAM118B
MTHFR
CLCN6
WBP2
TXNRD1
MED11
IL1R1
NECTIN4
SLC35B1
ATF3
EFNA3
STAT6
SYNGAP1
PHF1
CUTA
SPIDR
LY6L
STARD3
PPP1R1B
HES1
TNS3
SCHIP1
C8orf33
TOMM22
CLCN7
SMARCD2
USP49
C1orf174
THAP7
DDX42
CCDC47
SRSF1
ISY1-RAB43
ISY1
RIOK2
MEOX1
ILF3
ABCC10
TRIB1
POLR3F
DZANK1
RBBP5
RXRA
SERPINI1
PDCD10
PRR5L
COMMD9
ELF3
TOX2
HOOK2
ANGPTL4
CDKN1A
GBA
UBE2H
TSR3
GNPTG
LZTR1
SPTAN1
VPS50
HEPACAM2
UAP1L1
MAN1B1
MACC1
POLR2J
UNC13D
TRIOBP
UNKL
SQSTM1
CD55
NOL4L
APOBEC3B
GADD45A
ATG16L2
VPS33A
FOXJ1
RHOBTB2
RARB
INO80C
ZNF335
TRIM29
TMC7
PIP4P1
OSGEP
APEX1
SLC35A5
ATG3
IRF2BP2
TRMT2A
RANBP1
METTL25
CCDC59
IDH3B
PSMB7
SUPT6H
SDF2
AVEN
OPN1MW3
OPN1MW2
OPN1MW
PGLYRP4
CARD16
FANCA
EN2
CLPTM1
APOC2
AURKAIP1
SUPV3L1
CYP27C1
GOLM2
TFPT
PRPF31
SPINK1
SNRPE
ZNF358
SMN2
SMN1
MCOLN1
DMAC2
GET3
YJU2
ANXA2
LYPD6B
MOCS3
DPM1
GSR
RDH5
ITGA7
BLOC1S1
PISD
SPIRE2
RIPOR3
ERICH4
REN
TRA2B
VIRMA
PDE4DIP
RAD9A
PPP1CA
RGS3