ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976673 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◣ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
MTRNR2L8
MTRNR2L2
MSH3
DHFR
MRPL11
TMEM199
SEBOX
POLDIP2
ERBB2
MAMDC2
MIEN1
GRB7
ARID3B
TES
KIF5C
PNMT
TCAP
ERAL1
MTRNR2L1
IRS2
SLC45A4
TET3
DUX4
MRPL45
MTRNR2L9
RARB
C8orf33
SFSWAP
MED11
RBBP8NL
CD300LF
UBE3B
KCTD10
CRBN
RGPD2
RGPD1
BHLHE40
CDKN1A
POLR3F
DZANK1
POLR2J3
PSMD3
CLPTM1
APOC2
SSH3
C1orf174
VIRMA
ESRP2
TRIM29
MUC3A
SCHIP1
RETNLB
GRHL2
CSF3
PSMB7
LAMP1
RDX
SLC35B1
TXNRD1
PGAP3
RBM48
PEX1
H2BW2
TSR3
GNPTG
KRT31
POLR2J
ASB2
ID1
SPIRE2
IDH3B
UNC13D
STARD3
PPP1R1B
APOBEC3B
SERPIND1
MMP13
LZTR1
ZNF585B
ZNF383
ATF3
TOX2
REN
TFPT
PRPF31
TJP2
RAD51AP1
C12orf4
TRA2B
LTBP2
CD55
CYP2A13
NECTIN4
POLR2J2
ISY1-RAB43
ISY1
SMN2
SMN1
VAC14
SLIRP
ALKBH1
MTBP
MRPL13
SUPT4H1
MBNL1
HES1
HAGH
FAHD1
RBBP5
ELF3
UNKL
C16orf91
ERCC1
UBQLN1
PLEKHH2
GFM1
GATB
DMAC2
ERICH4
TMCO6
NDUFA2
IK
NDUFB3
FAM126B
THAP7
STAT6
TNS3
RAPGEF3
JMJD7-PLA2G4B
JMJD7
PLA2G4B
SOCS2
SPINK1
MRPS11
MRPL46
HEXA
FLOT2
DHRS13
SKIL
TRMT1
NACC1
PHAX
ALDH7A1
RMND5B
CLDN9
CLDN6
STX16
FOXJ1
PISD
RRP15
PLLP
SPIDR
TOMM22
YAP1
SQSTM1
IRF2BPL
U2SURP
PCNP
RXRA
ZBTB45
SLC27A5
UBE2I
ZNF608
SALL4
NUGGC
ELP3
NAGPA
CARD16
LYPD6B
KRT80
SLC25A53
FAM199X
ABCC10
TMC7
LPCAT3
OR9A4
DHRS3
SUPT6H
SDF2
TMEM178B
GRAMD2B
VPS50
HEPACAM2
MRTO4
EMC1
TSFM
OSER1
SMG7
SUMF1
CYP27C1
TRIB1
MOCS3
DPM1
SUPT7L
SLC4A1AP
CDKAL1
TBRG4
ZNF576
IRGQ
SAP30BP
RECQL5
SLC25A45
FRMD8
ART1
STON2
RGS14
LMAN2
RPS26
TRAF4
TRMO
SPATA25
NEURL2
CTSA
ZNF789
ATP5MF-PTCD1
ATP5MF
CASC3
ZMYND8
POLD4
RGS3
SENP1
PFKM
UXS1
NAPB
SNRPE
DNAJC11
TTC17
PUM2
GOLM2
ATG14
METTL2A
ZSCAN25
PIM3
RECQL4
LRRC14
NEUROD2
MFSD3
GPT
EIF3H
FAIM
EPB41L1
SERP1
EIF2A
GPRC5A
NPM2
BCL3
DDX46
SUPV3L1
EPHB3
CSRNP1
PLEKHG3
BRIX1
RNASEH2C
KAT5
SLCO4A1
MTO1
CGAS
METTL25
CCDC59
METTL2B
STYXL1
AGTPBP1
MDH2
HEMK1
C3orf18
REEP4
HR
TFAP2C
OR2M2
ELFN2
RTF2
NDUFAB1
C19orf48
RALGDS
SPAG16
NIBAN2
METTL27
TMEM270
IL1R1
TBL1X
GET3
CCDC88B
TJAP1
MTUS1
SLC16A5
BNIP1
TTI1
RPRD1B
ZSCAN22
OSBPL2
KIF25
PTPRR
DDX23
CXCL5
PTPRB
SPDYE2B
SPDYE2
UPK3BL1
KRT1
TTC31
CCDC142
COLEC11
VCAN
KALRN
DOK3
DDX41
CHMP7
ZNF17
BRF2
RAE1
MTRNR2L3
EIF5A2
FOXO6
ZNF865
ZNF524
FIZ1
MS4A5
RARG
TRIP4
PCLAF
PPP1R11
CD109
SYT12
POLR1H
ZNF3
COPS6
PSG1
LGALS8
DOK7
FNTA
TAS1R1
NOL9
PPWD1
CENPK
GTPBP4
HS3ST6
TOP3A
SMCR8
ECHDC1
TIMM22
DIABLO
WSB2
CCDC97
RAB3IP
MFSD10
ASB6
RIOK2
ZGPAT
ARFRP1
KLF10
PLA2G2E
SMIM41
ATG101
ZZZ3
IRF2BP2
C8orf74
BAIAP2
PRKRIP1
BNIP3L
CLCN5
SRI
ZNF830
CCT6B
ATAD2
KYAT1
LRRC8A
MAPKAPK5
HUS1
BIRC3
RCE1
WASHC5
NSMCE2
MB
PDCD6IP
BCAS1
PHF3
SPAG4
VPS33A
NME1
LSG1
TNFRSF10B
MRPS10
HOXA4
HOXA3
HOXA5
GTSF1L
TXN2
ECH1
ZNF514
ZNF2
AXL
PRKAG2
C19orf33
PSMD1
GLTP
BMS1
SLX4IP
MKKS
UPK3BL2
GADD45A
LARP1
S100A2
MIEF1
PSME3
BECN1
USP30
RPTN
DPP3
FAM133B
SMYD1
DAZAP1
DLC1
ZNF165
OR1F12
EIF1AD
CST6
BANF1
NFKBIA
SLC2A4RG
LIME1
PTPRU
VPS37A
CNOT7
SH2B1
EIF3F
GNG4
MED20
BYSL
REG1A
TUFM
PDAP1
BUD31
CYP4X1
TIMM50
SH3GL3
TRIOBP
NOXO1
SSUH2
TBL3
RPS2
RNF151
AQP6
AQP5
TBL1XR1
STX1A
PRR3
GNL1
ZNF408
ARHGAP1
PHRF1
ANXA10
SPHK2
RPL18
FAM83E
GTF3C5
LRRC23
SCARB1
WDR72
WDR18
RBPMS
TRIM48
RPLP0
GCN1
MED6
POMZP3
TMPRSS11A
PBX2
GPSM3
AGER
ERAP1
STMN3
RTEL1
ZC3HC1
FIS1
RBM42
CLDN15
DDX11
ATP6V0D1
AGRP
TIPARP
ZRANB2
OR2W3
ZNF579
GPATCH3
GPN2
C5orf63
COX16
LOC102724770
DGCR6
LIMA1
HNF4A
IL36B
MEOX1
HOOK2
JUNB
FEM1A
GSC2
EVPLL
MRPS7
MIF4GD
GGA3
ITGB5
ATG9B
ABCB8
ATP6V1C1
SSNA1
ANAPC2
GRK7
THBS3
MTX1
TBC1D17
PNKP
AKT1S1
YJU2
MRPL1
MED23
RAB40C
ZFP64
SEPTIN9
LANCL2
PMEPA1
ATP13A3
TTC32
PSMG2
CEP76
MARVELD1
PDE6D
COPS7B
RWDD1
NDST1
CDC6
ZFHX3
CCDC102B
BCKDK
KAT8
PPP1R37
KRR1
TRIM16L
UTP20
BIRC2
CDK5RAP2
PNO1
PPFIBP2
PHF5A
ACO2
FSCN1
NGDN
VPS11
RASEF
NDUFB5
MRPL47
MEAK7
PLA2G2A
FAM162A
CCDC58
SPTLC2
RPS12
SYT1
C7orf65
TMEM95
KCTD11
COL9A3
TPD52
PSG7
PLEC
ABCC3
FAM184A
RPL26L1
CDK11B
CDK11A
SNCAIP
PMPCA
ENTR1
TMEM205
RAB3D
CCDC159
PUS10
PEX13
MLX
HSD17B1
COASY
SULT2B1
FBXO32
SETD3
CCNK
FCF1
AREL1
YIPF3
POLR1C
LRRC73
FRG2C
TRMT2A
RANBP1
KLF9
SEC13
INTS1
DNAH5
MMP10
UQCRQ
LEAP2
GDF9
NUDT18
UBAP1
RPL23A
RAB34
PROCA1
TLCD1
NEK8
ERGIC2
MTHFR
CLCN6
ZDHHC6
VTI1A
PRSS22
PPL
GTF2H3
EIF2B1
KCNJ14
GRWD1
PLEKHN1
NOC2L
KLHL17
MUC2
TSR1
SGSM2
PGGT1B
DBNDD2
AP5S1
PHLDB2
GLCCI1
AMOTL2
TMEM101
DNTTIP2
TMEM262
NKD2
ITGA2
DGAT2
EIF3E
ANXA2
KLF6
LYPLA1
NDUFA9
AKAP3
ALKBH3
ADGRG7
ZBTB38
MUL1
EXOC5
AP5M1
AURKAIP1
RDH5
ITGA7
BLOC1S1
TMEM63A
RBM39
NOTCH3
PHB2
RBM19
TUT1
KCNAB1
DOT1L
MTA2
SEMA4B
MAP3K7
CRTC1
CATSPER2
UPP1
CDK12
MED1
CPA1
NUDCD3
LDHD
TCF24
RPS14
CDH18
NUS1
ZNF335
RHEBL1
LRRC29
KMT2D
CORO1C
PFDN1
C5orf51
LRFN4
VWA7
LSM5
AVL9
KCNIP2
ZFPL1
CDCA5
NOC4L
DDX51
ZBTB7B
LENEP
CCNT1
EFHD2
SART3
ISCU
LOC100509620
KMT5C
SLC9A1
NDRG1
PTAFR
SDC1
GSR
TSN
MAIP1
SF3B3
COG4
TARS2
OPA1
CHRM3
SNRPB2
ASH2L
ARHGAP30
PLAGL1
TSC1
GFI1B
WDR53
FBXO45
KPTN
ANXA3
HCAR2
CERK
URM1
RRNAD1
ISG20L2
PTPN2
MACROD1
OAZ3
DNAJC30
BUD23
FOS
MED4
COG2
RBP2
PLD1
TNFRSF1A
IPO11
DIMT1
WDSUB1
SPTBN2
FOXA2
TGFBI
BUB1B
FADD
LGR6
OR2T1
POM121L12
SPNS1
LAT
RIPOR3
SF3A3
ANKK1
GPC1
TCERG1
PCID2
CUL4A
IRF6
OR6B2
NDUFA10
MRPL55
MICAL2
PMS2
AIMP2
IER3
FLOT1
GRAMD1A
HSPB1
EIF2S1
ATP6V1D
ACP3
TLL2
PPP1R13B
ZBTB7C
DHX35
SETD1A
ORAI3
GUCA2A
CAPN14
TEKT2
ADPRS
CLPB
MYL12A
SEC61B
IL16
MYL12B
PARL
TBL2
RPL7L1
IL1F10
PIK3C2B
TAF6
MBLAC1
CNPY4
BTNL8
HSPBP1
BRSK1
MBD6
DDIT3
SPDYE14
SPDYE10P
TNFRSF12A
THOC6
HCFC1R1
UQCC3
LBHD1
TPRKB
UBXN1
MRPS26
GNRH2
PPCDC
MRPS15
AAAS
LNX1
RARA
TAGLN2
SLC26A8
MAPK14
CDC5L
CTTN
ZNF16
TLR5
ITGA3
OPN1MW3
OPN1MW2
OPN1MW
DENR
LY6E
KRT17
CDH1
TCF7
PAXBP1
NUP107
ZCCHC4
BCAR1
CYP24A1
MRPL48
FURIN
ING5
FAM83A
GSN
PLXNB2
ZMAT2
HARS2
HARS1
DRG2
RHCG
SKIDA1
MLLT10
SCRN2
OSBPL7
LRRC46
SYBU
BBS1
TMPRSS4
SMIM35
SEMA3F
METTL21A
SPSB3
NUBP2
MRPS34
EME2
PKD1
NME3
AKAP10
UVRAG
SLC25A51
PSMC3
LY6D
SNRPB
CEBPB
SMIM8
GJB7
AP5Z1
NOL4L
TEX28
HMOX1
RNPEPL1
DUSP28
ANKMY1
CSTF1
AURKA
TMEM41A
SREK1IP1
CWC27
LMNA
CDC23
LRMDA
E2F8
FAM240C
BAK1
HACL1
BTD
COLCA2
CYP26B1
ZNF394
ZKSCAN5
MPPED1
KMT5B
PTP4A1
PTPN12
MRPS22
GTF3C3
C2orf66
MAGEF1
ANGPTL4
TIMM23
VSIR
WNT7B
DUS2
DPEP2NB
DDX28
MRPL40
HIRA
PRKCD
MUC17
PRKAR2B
CNKSR3
SIGLEC15
NFX1
ZNF341
PTPRF
SLC35F6
RINT1
PUS7
LGALS7B
RP1L1
PPP5C
EPS8
KYNU
PDE12
NUDT5
CDC123
FRMD7
ADAR
TIMM9
KIAA0586
TPD52L2
ABHD16B
B4GALNT3
LOC102723996
ICOSLG
XPO4
SLC25A11
RNF167
PFN1
GP1BA
BANP
ENO3
SRP68
RBX1
SEMA6A
DNAI2
ZACN
GALR2
IQANK1
FAM83H
TRIM4
NMT1
DCAKD
TXNL4B
DHX38
ENTPD7
BOD1
RPS5
UBE2L3
ANXA1
CASP5
CDK5RAP1
PARP4
SBNO1
QRICH1
UQCRHL
MDGA1
KCNK15
CASTOR1
FXYD3
RGS20
ATP6V1H
LURAP1L
MAN2C1
CCAR2
C8orf58
MINK1
CNPY2
COPS8
ANAPC5
TTC6
FOXA1
CD63
LIF
PSMA1
PDE3B
SNX16
MRPS18A
CD36
RBSN