ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976680 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◣ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
ERBB2
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MRPL11
MIEN1
GRB7
TES
MAMDC2
ARID3B
TMEM199
SEBOX
POLDIP2
KIF5C
MTRNR2L1
CRBN
GRHL2
UBE3B
KCTD10
ERAL1
SFSWAP
TOMM22
PNMT
TCAP
IRS2
MRPL45
RGPD2
RGPD1
ISY1-RAB43
ISY1
PSMD3
STARD3
PPP1R1B
CD300LF
TET3
POLR2J3
RBM48
PEX1
ELF3
GPRC5A
SSH3
MTBP
MRPL13
GET3
SLC45A4
RBBP8NL
CD55
TXNRD1
PGAP3
DUX4
SUPT6H
SDF2
UNC13D
TRIM29
SPAG16
TNS3
TSR3
GNPTG
NOL4L
BCKDK
KAT8
FNTA
STAT6
MTRNR2L9
IL1R1
LZTR1
CARD16
SLIRP
ALKBH1
SCHIP1
ESRP2
POLR2J2
TOP3A
SMCR8
TSFM
LYPD6B
SEMA3B
LSMEM2
ZNF789
ATP5MF-PTCD1
ATP5MF
SALL4
HEXA
HES1
LTBP2
C1orf174
SAP30BP
RECQL5
TJAP1
APOBEC3B
TRA2B
CYP2A13
ID1
RBBP5
GSR
VPS50
HEPACAM2
MOCS3
DPM1
TRIB1
POLR2J
DUSP2
ASTL
SRI
ZNF335
PDAP1
BUD31
TXN2
DMAC2
ERICH4
UBE2I
DNAJC11
SPIRE2
UVRAG
RTF2
MUC3A
GFM1
KRT1
RHOD
AXL
MRPS15
NCBP2AS2
NCBP2
MRTO4
EMC1
RMND5B
KLF6
PSMD1
TRIM48
SPATA25
NEURL2
CTSA
ZSWIM1
SOCS2
DDX23
UPK3B
ANGPTL4
ERCC1
RPS26
CCDC97
SMN2
SMN1
C5orf63
ART1
YAP1
GLTP
ZNF830
CCT6B
CSF3
TMEM205
RAB3D
CCDC159
TJP2
ATG9B
ABCB8
KIF25
IDH3B
GRAMD1C
INO80D
LRRC47
C8orf33
RDH5
ITGA7
BLOC1S1
GNG4
HNF4A
PISD
NAGPA
ECHDC1
SLC25A45
FRMD8
CSRNP1
LAMP1
SPIDR
CDKAL1
NKD2
C19orf33
C8orf74
NGDN
MED6
TMC7
JMJD7-PLA2G4B
JMJD7
PLA2G4B
BHLHE40
KALRN
ERAP1
PDCD6IP
OSBPL2
GSN
SEPTIN9
SCRN2
OSBPL7
LRRC46
SLC35B1
SNRPE
TBRG4
REN
ZZZ3
MAP3K7
RPL23A
RAB34
PROCA1
TLCD1
NEK8
PALB2
DCTN5
TJP1
TAS1R1
NOL9
PPWD1
CENPK
CENPBD1
WSB2
SUPT4H1
LRRC29
DDX46
EIF3H
ZSCAN25
SAMD10
PRPF6
THAP7
CDKN1A
ZBTB7C
NUGGC
ELP3
SPINK1
RPS5
RPTOR
APMAP
MED11
TRMT2A
RANBP1
PRKRIP1
SUPT7L
SLC4A1AP
ZNF165
OR1F12
ZNF585B
ZNF383
PHAX
ALDH7A1
SPNS1
LAT
STX16
UNKL
C16orf91
MB
WASHC5
NSMCE2
ATG14
SENP1
PFKM
PSME3
BECN1
CDH1
ZNF408
ARHGAP1
SLC25A53
FAM199X
SUMF1
TMCO6
NDUFA2
IK
LDHD
C16orf74
CYP27C1
SMYD1
KRR1
MEAK7
DIABLO
LAMTOR1
ANAPC15
POLR3F
DZANK1
C5orf51
TNFRSF10B
MAN2C1
IZUMO1
FUT1
FGF21
LTO1
ANXA2
NECTIN4
PFDN1
REXO1
ZFYVE26
RAD51B
ZNF365
HAGH
FAHD1
CLPTM1
APOC2
PSMG2
CEP76
NDUFA9
AKAP3
FOXJ1
VPS52
RPS18
B3GALT4
ZNF576
IRGQ
RETNLB
KMT5B
GABRR1
XAB2
STXBP2
PCP2
RAE1
MTRNR2L3
NEMF
PEPD
MESP1
MRPL58
NOM1
RXRA
UBQLN1
GRAMD1A
PDC
NDUFA4
SART3
ISCU
ZCCHC10
ASB2
NVL
COLEC12
POLD1
NR1H2
TRMT1
NACC1
KLF10
ZNF514
ZNF2
TPRN
TMEM203
NDOR1
PIM3
MUC20
CCDC124
PLEKHN1
NOC2L
KLHL17
MEOX1
ZNF436
RCE1
ABCC10
METTL2A
DHRS3
EPHB3
RNF213
CASC3
KRT31
LRFN4
NOP16
HIGD2A
TRUB2
COQ4
ZG16B
NOL10
IRF2BPL
MMP13
DOK3
DDX41
ZCCHC4
RWDD1
TIMM22
KYNU
PRKCD
KRT39
APOBEC3H
TRAF4
PTK2
GPATCH3
GPN2
NOL8
CENPP
TGFBR2
TRMO
SLCO4A1
MAFK
TPST2
TATDN3
NSL1
PSMB7
SUPV3L1
U2SURP
ZGPAT
ARFRP1
SQSTM1
VIRMA
RDX
GATB
STYXL1
MDH2
RAPGEF3
MAIP1
PRR3
GNL1
NXT2
TACR2
ELFN2
ZSCAN22
ANXA10
FZR1
DOHH
AP5S1
CDC6
CBLL1
CASP8
CPA1
CPSF1
THUMPD1
SLC39A4
LRATD2
BIRC3
NPM2
BRWD1
SPINT3
CAPN14
TFPT
PRPF31
ZNF507
NTSR2
DNAI2
DPP3
MYBL2
PSG9
SENP5
LIMA1
VAC14
BCAS1
STON2
EVPLL
PRSS22
ZNF608
EPYC
AGAP3
SART1
TMUB1
FASTK
MRPS7
MIF4GD
GGA3
ZDHHC6
VTI1A
FAM83A
PPP1R37
BRPF1
CYP4X1
PTP4A1
PPP1R15B
FOXS1
TCTEX1D4
PLK3
BTBD19
MESP2
RALGDS
TBL1X
DNAJC30
BUD23
CD109
GPC1
OXNAD1
DPH3
TOMM6
PRICKLE4
FRS3
PCYT1A
BCL3
RARB
METTL25
CCDC59
CXCL17
HEMK1
C3orf18
CTSD
TBC1D15
VPS33A
NUP214
TACC1
TSN
VGLL4
RPLP0
GCN1
GTPBP4
KMT2A
H1-7
HUS1
HS3ST6
CLCN7
TOX2
KLF9
ITGA2
GTF2IRD2
CDK12
WDR24
EXOSC5
BCKDHA
NCAPH2
LMF2
SEC61B
STUB1
JMJD8
PABPN1L
NOTCH3
CNPY2
HTRA2
DQX1
NHP2
TNPO3
TCF24
PLA2G2A
ZNF696
SETD1B
RHOF
LANCL2
EIF2S1
ATP6V1D
ABT1
CLDN4
COLEC11
SETD3
CCNK
LCN2
BABAM1
UPP1
EIF2D
TUFT1
PMPCB
ZNF212
DOK7
CCNT1
INTS1
SLPI
PSMC3
UBE2H
NOXO1
NAPB
PTPRR
UBAP1
EPS8
STMN3
RTEL1
DBNDD2
TBL3
RPS2
RNF151
ATP1A2
IL1RN
SURF2
SURF1
RPL7A
MED22
CBLC
FGF19
SEMA5B
TIMM50
RARG
PRKAG2
MRPS11
MRPL46
LURAP1L
SH3GL3
PNO1
BRMS1
SLC2A8
RIN1
ATF3
TMEM40
H2BW2
NDUFB5
MRPL47
WDR97
MAF1
CYC1
AP5Z1
GRAMD2B
PLEKHG3
TXNL4B
DHX38
TMEM258
FEN1
LPCAT2
RCOR3
FUBP3
TIMM23
MED23
ALKBH3
TRIM65
MRPL38
RPL22
RNF207
P3H4
FKBP10
ZNF668
ZNF646
SYBU
MRPL21
IGHMBP2
PIK3C2B
ZFP42
BIRC2
CCDC88B
BMS1
NFKBIA
WNT7B
MDH1B
FASTKD2
UQCRQ
LEAP2
GDF9
NOL11
RIOK2
FLOT2
DHRS13
CMIP
POLD4
TAGLN2
C20orf85
UBE2M
CHMP2A
KRT17
OST4
EMILIN1
NOP58
BCAR1
SLC2A4RG
LIME1
GFM2
TCERG1
SNIP1
DNALI1
SNRNP200
NT5C
ABHD11
KYAT1
ZNF865
ZNF524
FIZ1
FASN
LRRC8A
SMIM41
ATG101
CLDN24
CLDN22
SMPD4
MZT2B
DGAT2
SETD1A
ORAI3
SKIL
GADD45A
YJU2
DNAJB12
FAM222B
KLK6
MAD2L1BP
GTPBP2
RSPH9
NIBAN2
SMYD3
DDX19A
ZXDC
TBC1D2
RASEF
IRF6
TH
INS-IGF2
INS
ZNF544
HOOK2
TRIOBP
SLC16A5
JUNB
KMT5C
TIMM23B
PARG
RAD51AP1
C12orf4
NUP107
COMMD2
GOSR2
PMEL
CARD18
EPPK1
CRTC1
RPTN
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
CACTIN
SMG8
FOS
CDKN2AIPNL
INO80C
ATP6V0C
AMDHD2
MAGOH
KIAA0895L
EXOC3L1
E2F4
SLC12A4
ELMO3
KCNK15
PLD1
FOXO6
EFHD2
GSC2
ATP13A3
TFAP2C
COX16
DNAH5
SF3B3
COG4
RPL26L1
ARID2
METTL27
TMEM270
WDR53
FBXO45
THOC1
GTF2IRD2B
PTK2B
FAM187A
EFTUD2
CCDC103
MNT
C7orf65
MDM4
FANCD2
PDRG1
SERPIND1
PHRF1
GOLGA7B
TMEM41A
ICE1
SUGCT
MPLKIP
SCAF11
TEKT2
ADPRS
SCARF2
SMG7
BANP
NGB
RPS9
TSEN34
SOX9
LEKR1
IGFL1
VPS11
NDST1
OAZ3
SLC7A6OS
PRMT7
SLC30A6
PES1
DIDO1
SRD5A1
NSUN2
GID8
ROBO1
PPIL4
SLC39A9
ERH
RICTOR
SH3PXD2A
SF3A3
MTIF2
TNRC18
LOC100129484
SRP19
ECH1
SEC13
FBXW2
ZBTB7B
LENEP
RBPJ
PSG1
TXNDC2
PIKFYVE
METTL2B
MUC17
SMIM12
NMNAT1
LZIC
FEM1A
PUS10
PEX13
RBSN
ATP6V1G1
EIF4H
TP53I3
SF3B6
FAM228B
CDK11B
CDK11A
TBL2
PLEC
AGTPBP1
DUS2
DPEP2NB
DDX28
ANO1
PLEKHG6
MYLIP
GAR1
FSCN1
SSNA1
ANAPC2
CZIB
BLVRA
CDC42EP4
RGS3
SGMS2
KRTAP5-6
HOXA4
HOXA3
HOXA5
LENG8
TM4SF1
SRP68
BCL9L
ZACN
GALR2
ADAM8
EXOC1
EIF1AD
CST6
BANF1
SSUH2
SULT2B1
RAD52
DUSP6
UQCRHL
ZMYND8
MRPL53
MOGS
RAI1
RGS20
ATP6V1H
FADD
ADGRG7
MORF4L1
CYP1B1
PROSER1
NHLRC3
SSTR5
EIF2B2
MRPL1
GDPD4
GTF2H3
EIF2B1
RNPS1
VPS28
NUDT5
CDC123
ZNF256
C6orf47
BAG6
APOM
RUSF1
VPS37B
CBWD5
CBWD3
CWC25
TRIM4
GJC3
PRKAG1
GABARAP
PDXK
PHF23
DVL2
ALDH18A1
HNRNPA2B1
CBX3
SLC39A10
GET4
ELP5
CTDNEP1
WDTC1
EPC2
DDX17
EIF4G2
STRBP
NUDT3
SLC25A25
NAIF1
WASHC2A
SEPTIN7
RNASEH2C
KAT5
WASF2
FRG2C
WASHC2C
UBE2Q1
CHRNB2
TSPAN31
MARCHF9
KCNK4
GPR137
CDK4
BAD
LOC102724770
DGCR6
GSK3B
ATP6V0D1
AGRP
RSF1
AAMDC
MSMO1
DAGLA
RPGRIP1L
FTO
ARL4D
MDM2
PTPRF
RPS6KC1
FAM72D
FAM72C
RPUSD4
FAM118B
MTHFR
CLCN6
WBP2
PMF1-BGLAP
PMF1
CCDC200
EFNA3
SYNGAP1
PHF1
CUTA
LY6L
SMARCD2
USP49
DDX42
CCDC47
SRSF1
ILF3
SERPINI1
PDCD10
PRR5L
COMMD9
GBA
SPTAN1
UAP1L1
MAN1B1
MACC1
FRG2
ATG16L2
RHOBTB2
PIP4P1
OSGEP
APEX1
SLC35A5
ATG3
IRF2BP2
ATAD2
AVEN
OPN1MW3
OPN1MW2
OPN1MW
PGLYRP4
FANCA
EN2
AURKAIP1
SKIDA1
GOLM2
EAPP
ZNF358
MCOLN1
PPCDC
RIPOR3
WDR74
STX5
PDE4DIP
LGALS8
RAD9A
PPP1CA
PDGFB
FCGR1A
PCIF1
SLC25A11
RNF167
PFN1
PURB
FXYD3
MYCL
DAZAP1
XPO7
DOK2
NME1
CLN3