ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930140 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◣ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L2
MSH3
DHFR
MAMDC2
DUX4
ARID3B
HEXA
EN2
MTRNR2L8
PNMT
FRG2C
ARL4D
MYLK2
NOTCH2NLC
NOTCH2
PURB
LAMP1
WASHC2A
ZNF285
ENTPD4
TGFB2
WASHC2C
MTRNR2L1
PDGFB
AP5Z1
CCDC200
IFIT1
TMCC3
MEOX1
BRF1
HEYL
BTBD6
ERCC1
TRIL
DERL3
SPATA25
NEURL2
CTSA
ZSWIM1
PDE4DIP
TNC
ZHX2
FRG2
MUC3A
ADAMTS14
CORO7-PAM16
CORO7
TNNC2
SNX21
VASH2
DOCK10
MSS51
CLCN7
ANGPTL4
ARID5B
CELA3B
WBP1L
NOTCH2NLB
NOTCH2NLA
ZNF668
ZNF646
MACC1
PIPOX
BHLHE40
C1QTNF1
COL23A1
RGMB
KLHL41
AFAP1
OR4D6
CRIP2
HMGCS2
XRN1
CSNK2A3
GPSM1
KCNMA1
THEMIS2
LOC102724770
DGCR6
SUMF1
TMEM91
B9D2
ZAR1L
BRCA2
STRA6
BMERB1
BCAR3
RNASEH2C
KAT5
RBFOX2
PPCDC
ARHGAP25
TRMO
TMEM239
C20orf141
RINL
IGLL5
SYNPO
RIPOR2
LCA5
FADD
SLC1A7
STBD1
ZNF229
PTCH1
B3GLCT
DENND2B
ITM2C
AKIP1
PVALEF
AATK
GADD45A
ADGRF1
OR51T1
TLCD4
PRR5L
COMMD9
CLN3
APOBR
SLC35A5
ATG3
TGIF1
ATP6V0D1
AGRP
FHL1
GFRA1
RBPJ
ABCC10
LTBP1
SULF1
CLDN5
PYCR1
MYADML2
FCRLA
NAV2
FRG2B
RHEBL1
IFNLR1
NFIB
BCAT1
SEC22B
SSU72
STUM
SLC27A1
TRIOBP
SLC8A3
CD82
PTPRD
PRL
FREM1
NTRK1
INSRR
SNX16
FOXB2
PALM2AKAP2
GBA
GET4
CDRT4
COL1A1
SPG21
MYPN
EPHA2
MYEOV
ARHGAP28
TNNT1
TNNI3
CYB5R1
ADIPOR1
PROM1
IQSEC1
SMYD1
WDR74
STX5
UXS1
CLIP1
ATRN
FRMPD1
MFSD2A
SACS
SLC19A3
ECT2L
MTUS2
TMEM120B
GPR61
DOK7
FHL2
MYOG
TNNI1
MUSTN1
ITIH4
NAV1
TP53AIP1
EPB41L3
PCBP4
GPR62
FSCN2
HDAC9
NNAT
BLCAP
EXOC7
TBL1X
HAGH
FAHD1
RMI1
HNRNPK
FLCN
B3GALT5
UPP1
ADAM12
PEDS1-UBE2V1
PEDS1
CMTM2
ACSS1
PALLD
ARL14EP
ZNF92
LMCD1
ARHGEF2
SYT8
RHOQ
ATP6V1E2
HMOX1
SCHIP1
ZNF507
TCAF2
PLAGL1
TMCC2
ITSN2
TES
PRRC2B
ARHGAP31
WSB2
HERPUD2
MYBPC2
SLC12A3
E2F2
DHRS3
KRT86
VGLL4
SPAAR
HRCT1
TMEM205
RAB3D
CCDC159
DTNA
LGI2
ATP6V0C
AMDHD2
PROX1
SH2D7
JUP
PAFAH2
PDZRN3
MTRNR2L9
UNKL
NAGPA
ASF1B
TCF4
RDH5
ITGA7
BLOC1S1
SELENOW
HPCAL1
MFSD1
DPYD
CDH7
RRAGC
SBK3
SBK2
RNF150
ASB2
BCL3
ARID3A
CHMP1B
MAP3K7CL
RIOK2
DAB2IP
HHIPL2
C20orf204
TSPAN12
VPS33A
TBC1D2
MYOD1
LIMK1
CELA2A
RFTN1
HNRNPLL
KDSR
RBM20
TBC1D9
TMEM242
SLN
SMARCD2
WRNIP1
MYLK4
RPL24
ANKRD1
RIPOR3
SYN2
SPNS1
LAT
SEMA5B
CPA5
RPS7
P2RY1
TCF7L2
SPON2
NDUFA4
KSR1
PTGIS
HNRNPH2
GLA
CCIN
PRUNE2
BMP7
OR6M1
AKAP11
PHRF1
ITGB3BP
EFCAB7
LURAP1L
LRIG1
RASGRP3
MYCN
LRRC47
BAX
CREB5
MYO18A
TNRC6B
IL32
RASGRP4
RYR1
NUTM2F
NES
GIT2
ANKRD13A
C1QTNF2
TNFSF15
GGA2
AGTR2
ID3
UBE2Q1
CHRNB2
PHC2
TMEM259
CNN2
TMEM40
NEK6
MLH3
SKP2
LMBRD2
PCIF1
ABLIM1
SYNPO2L
MYOZ1
CYP27C1
ENGASE
TBC1D5
CELA3A
SOBP
SHB
ACTC1
APOE
APOC1
RMND1
ARMT1
TMEM167B
KRTAP2-4
HIF3A
FAM200B
CCN2
ALK
HES1
PHLDB2
KANK2
CELA2B
UCHL5
RO60
SVIL
CEP41
SPINT2
EZR
AMPD3
IGDCC4
TP53INP2
INTS10
KLF3
SSBP1
KDM3A
CELF2
SLC38A8
FGF16
FLRT3
ATF3
TRIM16L
FGF6
LBH
STX11
FAM193B
OR14K1
OR14A2
GNAI1
DDX60L
BAIAP2
USP2
MYL5
ATP5ME
DAPK1
TSPAN31
MARCHF9
CDK4
PPP6R1
DMD
EYA1
SLC22A4
SLC44A1
NNMT
OPRD1
RERE
MYL12A
ACOT9
NUP50
TMEM82
SLC25A34
KANSL3
FER1L5
S100A2
DAG1
UBL7
BAHCC1
HRH1
SORCS1
WBP2
SRP9
MXRA7
SH3PXD2A
CRACR2A
SPATC1L
IFNAR1
SRP68
PTK6
SLAMF1
ARMCX5-GPRASP2
NAPA
TNNT2
NUTM2G
ARMCX5
CRYGN
ZBTB18
RAPGEF1
MYCL
SREBF1
VTA1
NMBR
NPEPL1
MCU
MAST4
CNN3
RXRG
ZNFX1
ANKK1
VSTM2L
CRYAA2
CRYAA
MINDY2
NAA38
CHD3
SPATS2L
CR1L
CADM2
MYH7
OCLN
NTSR1
CKMT1B
WNT1
MSGN1
G2E3
SEMA3D
SYNJ2
MAPK10
PLEC
PLXNB2
PKMYT1
YARS1
S100PBP
ACVR1
LRFN4
MYBPHL
INTS12
GSTCD
PRKAG3
ZNF358
MCOLN1
SERINC2
BMP5
CPD
TP53BP1
UBE2V1
RGS12
PRIMPOL
CNBD2
CASP3
LNX1
KCTD14
SYTL2
NPAS4
LRRC17
GSN
USPL1
HMGB1
ZCCHC24
JPH2
SYNE3
GDNF
CHN1
IRF2BPL
SPRY1
SLC38A10
SSUH2
CPA1
STYXL2
GPA33
ASB4
ZNF335
SSTR5
CHST12
ATOH8
CDH13
LAMB1
TP53I3
SF3B6
FAM228B
PUSL1
ACAP3
PLPPR1
RALGDS
TEX46
NUDCD3
KDM1A
ARID5A
HS1BP3
PAG1
CCNG2
COL16A1
CGGBP1
C3orf38
LSM12
G6PC3
IZUMO2
ADCY7
TLN2
CARD16
SPRED2
SOX8
LMF1
PPP1R3A
RCN1
CNTN6
BTG2
NFKBIZ
SLC1A5
TBX2
PAQR8
AMOTL1
MCIDAS
AADACL4
SYTL3
CCNO
SPATA13
EXOC2
MGP
NOL4L
FSCN1
KLHL12
NFIC
FOXN3
ABHD2
CDYL
COG2
LIN7C
TRIP4
PCLAF
SYCP2
FAM217B
IFT52
SNRPB2
IFNAR2
PPP1R3D
PLAU
TLR9
SLC7A5
DICER1
SERP1
EIF2A
ATP6V1C1
MED18
CARD10
TYMS
PBK
DCBLD2
C1QTNF7
ANXA6
BMF
C1orf226
IYD
UTP3
ERI1
SOAT2
IGFBP6
MLLT6
ZNF555
MAMSTR
ENTPD2
GXYLT2
TMEM131
SUPT7L
SLC4A1AP
CBWD5
CBWD3
SEM1
ODF2L
RBM43
RPA3
EAPP
HOXC13
INKA2
CHD2
TDRP
TNPO3
GCK
SLC25A26
WSCD1
TACR3
ZBTB21
LPCAT1
CASD1
EFNA5
ST7
GNA12
ADGRF3
KANSL1
RNF183
MTHFD2L
CT55
CEP162
EHD1
IER5
WRN
PURG
MTBP
MRPL13
MDM2
RAD9A
PPP1CA
STK24
SPRY4
COL4A2-AS2
FAM184B
MRPL23
RPS15A
ARL6IP1
F7
AMZ1
AVEN
COMMD4
VAMP5
TBC1D19
VAMP8
NCAM1
HAAO
RASL11B
CLMN
MAB21L3
FBXW4
TRIM62
LYSMD2
AEBP2
TMOD2
LTBP2
OBSL1
CCNI
ST3GAL5
VWA3B
ASB18
CA11
FLNC
COX7A2
BCAM
ZNF622
PROSER1
NHLRC3
ARHGEF10L
BGN
DZIP3
CIP2A
PEX19
MOCS3
DPM1
SIX1
NBL1
JDP2
RAP1B
ZNF512
C2orf16
RGS19
OPRL1
LKAAEAR1
SSBP2
C1orf198
CAND1
ANKRD12
TMBIM4
C10orf67
SCAF1
RRAS
RPUSD4
FAM118B
NOXO1
VPS11
SYNGR3
GFER
TUFT1
PTP4A1
THAP1
CDC42EP3
ERCC2
PIP4P1
OSGEP
APEX1
ASIC3
SLC4A2
CDK5
PNP
RRP15
PPIP5K2
MARCHF8
TM4SF4
NFATC2
IGSF10
PSEN2
TANK
SLF2
RBM48
PEX1
RARA
KLHL30
CDH11
CHMP2B
ARFGAP1
TPP1
TAF10
ARID1A
MAD2L2
TNNI2
FAM151B
DRAXIN
IFFO1
FRY
PCNX1
HSPB2
EHD2
CRYAB
C11orf52
GABARAP
PHF23
DVL2
MB
E2F6
MIDEAS
MAP1LC3C
KREMEN1
FIP1L1
ZNF280A
POLR2E
GPX4
ZADH2
TSHZ1
UVRAG
ITPK1
CCDC174
ZNF205
PCBP2
ZNF385A
TEX36
PSME1
FITM1
RRN3
SH3BP4
KIF17
MATN1
PLEKHS1
RGS20
ARID2
ATP6V1H
SMAD3
MNAT1
SPATA9
RHOBTB3
MAP3K7
CDK5RAP2
MTF2
TBC1D13
AZIN1
NLRP6
AGAP2
UQCRHL
NUP42
GRN
MUSK
WNT10A
UBB
DARS1
NR2E3
CEP68
GAS1
PSMA5
SH2B1
PIH1D2
NKAPD1
PPP3CA
STAT1
STARD3NL
TRMT10B
BIN1
THAP10
LRRC49
CCDC9B
MME
ERFE
LRRC58
WBP11
C12orf60
SEPTIN9
SF3A3
ABCC3
CTR9
ZNF32
TRMT5
SLC38A6
AFF1
LIX1L
CASQ2
RPL22L1
FANCC
ZNF593
C1orf232
MRAP
FAM110D
SPTAN1
CACYBP
GTF2B
RAPGEF4
WDR11
THUMPD3
NFIA
SIRT2
NFKBIB
EGFR
GPR146
SIGLEC11
LFNG
VAMP2
PER1
PEX3
ADAT2
NAGLU
DENND2A
INPP4B
RGS3
MAP2K3
SH2D3C
POLR2M
SLC12A7
NBPF26
NBPF19
NBPF14
CDK9
DNASE1
TUBA1B
RTKN
ATP6V1G1
MSL2
C22orf31
CCDC146
N4BP2L2
PPP4R3B
PALD1
GPR153
TTC30A
GGTA1
LOXL1
RRAD
CIAO2B
CES2
CDH16
SETD5
TMEM61
DAPK3
EXOSC8
ALG5
INMT
SLC2A10
DNTTIP2
CD44
PSAP
KCNF1
MTMR9
PLAAT5
DBF4B
MBNL2
LOC100421372
HSPA14
CDNF
ANXA2
WASHC5
NSMCE2
LOC388282
AP5S1
FLYWCH2
TUBG1
RETREG3
KRTAP5-3
KRTAP5-2
NPPC
PNPT1
CHRNG
RBMS3
ABCA4
ARMC8
ALDOA
MEF2D
HNRNPD
EVPL
CCDC15
LOC112694756
IL26
EFHC1
PLEKHD1
PGF
RIMS4
MPRIP
MPP7
TSR3
GNPTG
TBC1D30
GNS
EPS8
JMJD1C
MRPL44
PPM1D
ESPNL
VGLL3
MYOF
CEP55
ZNF143
RBBP5
ST3GAL4
POMZP3
SLC35E2A
NUP205
SLC22A8
FAM120B
DLL1
ZNF519
ICA1L
VPS50
HEPACAM2
PPL
COX16
PFDN4
ANKRD40
NKAP
GBX2
THADA
SELENOT
KIF16B
CEP63
ANAPC13
LSMEM1
SPACA6
STK36
RNF25
PRDM12
SGIP1
STXBP5
DCLRE1B
AP4B1
HOXA4
HOXA3
HOXA5
MRPS18A
MTMR14
MYL12B
HUNK
TPM2
TMEM39B
TGFBRAP1
C2orf49
DAAM1
WDR5