ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976677 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◣ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
ERBB2
MIEN1
GRB7
MRPL11
MAMDC2
ID1
MTRNR2L8
SLC45A4
MTRNR2L2
MSH3
DHFR
ARID3B
ERAL1
SSH3
PNMT
TCAP
TMEM199
SEBOX
POLDIP2
RBBP8NL
IRS2
GRHL2
SFSWAP
TES
TOX2
TET3
RAPGEF3
MTRNR2L1
NAGPA
KIF5C
RBM48
PEX1
C1orf174
TNS3
SLC35B1
C8orf33
ANXA10
LTBP2
CD300LF
ISY1-RAB43
ISY1
MTBP
MRPL13
MRPL45
CRBN
BHLHE40
NECTIN4
REN
STARD3
PPP1R1B
ASB2
TOMM22
ELFN2
NAPB
GOLM2
SPINK1
PSMD3
TMC7
PGAP3
WBP2
UNC13D
DUX4
SCHIP1
CDKN1A
ZDHHC6
VTI1A
STX16
IDH3B
VPS50
HEPACAM2
RXRA
SPIRE2
SUPT7L
SLC4A1AP
TXNRD1
OSER1
RPTOR
SMN2
SMN1
GSR
SERPIND1
ANXA2
CARD16
ABCC10
SKIL
SQSTM1
SALL4
PSMB7
BUB1B
BCL3
GPATCH3
GPN2
FLOT2
DHRS13
KIF25
HES1
APOBEC3B
SUPT6H
SDF2
PLD1
GPRC5A
UBE3B
KCTD10
LYPD6B
CSF3R
CDKAL1
GRAMD1C
POLR2J3
IER3
FLOT1
PLA2G2E
IL1R1
CSF3
GLTP
ZBTB7C
EIF2D
SLC16A5
POLR2J
UXS1
SPIDR
LIMA1
RBBP5
C8orf74
ESRP2
MBNL1
ELF3
RGPD2
RGPD1
TRIB1
EPHB3
C19orf33
POLR3F
DZANK1
RASEF
OR9A4
TRIOBP
RARB
MTRNR2L9
TRIM16L
LAMP1
RIOK2
SLC25A45
FRMD8
EIF5A2
CXCL5
MED11
TRIM29
TSR3
GNPTG
GATB
PMEPA1
CDH18
CD55
EPB41L1
DHRS3
ZNF398
FOXJ1
NOL4L
JMJD7-PLA2G4B
JMJD7
KLF6
PLA2G4B
ANGPTL4
BANP
ZZZ3
SNRPE
RAD51AP1
C12orf4
UBE2H
CYP2A13
SPAG16
OSBPL2
TAS1R1
NOL9
PTPRR
GRAMD2B
TRMT2A
RANBP1
PLAGL1
NDUFAB1
SOCS2
TRAF4
ITGB5
NGDN
YAP1
KMT5B
PISD
ATG9B
ABCB8
ATF3
MRTO4
EMC1
SAP30BP
RECQL5
HOOK2
JUNB
RNF213
GET3
CSRNP1
THAP7
SPHK2
RPL18
FAM83E
WASHC5
NSMCE2
SENP1
PFKM
PRKAG2
CLPTM1
APOC2
RMND5B
U2SURP
SYBU
HAGH
FAHD1
EIF3F
CYP27C1
UBAP1
TMBIM1
DNAJC30
BUD23
PLEKHG3
FNTA
TMEM178B
TRAK1
RDX
MTUS1
MOCS3
DPM1
PECAM1
DMAC2
ERICH4
WDR53
FBXO45
PKP2
COLEC12
POLR2J2
TIMM23
ZNF335
METTL25
CCDC59
TSFM
TJP2
TMEM63A
EEF1AKMT3
NKD2
TFAP2C
SLC25A53
FAM199X
KLF10
BIRC3
EIF3H
ZNF830
CCT6B
PLEC
LANCL2
E2F8
SEMA5B
SOX9
NAB2
RTF2
STX1A
HEXA
DOK3
DDX41
STX6
MMP10
CDC6
ZSCAN22
TSN
URM1
OPA1
PRKRIP1
MARVELD1
IRF2BPL
GOLGA7B
ERP27
SPNS1
LAT
UNKL
C16orf91
ZNF585B
ZNF383
WSB2
FAIM
RHOD
PHTF2
RGS3
STON2
ERCC1
ZBTB7B
LENEP
OAZ3
RPS26
SEPTIN9
MEOX1
FOXO6
TBC1D2
EMC4
DUS2
DPEP2NB
DDX28
IGFL1
PES1
REXO1
TOP3A
SMCR8
ZNF165
OR1F12
SPATA25
NEURL2
CTSA
ZSWIM1
ZSCAN25
TPRN
TMEM203
NDOR1
GSDMD
WDR86
GABARAP
ELP5
CTDNEP1
ART1
RHEBL1
KRT31
C5orf63
TTC17
KMT2D
REEP4
HR
NDST1
TBC1D14
TBRG4
AXL
FAM83A
MEAK7
NUP107
ITGB3BP
EFCAB7
GTF2H3
EIF2B1
EVPLL
SYNCRIP
PTK2B
GADD45A
BRPF1
SPTLC2
JRK
NT5C
COMT
ARNTL
WDSUB1
TNFAIP1
IFT20
TMEM97
RETNLB
DUSP6
ITGA2
COPZ1
ATP6V1G1
ZNF789
ATP5MF-PTCD1
ATP5MF
ZBTB45
SLC27A5
ATG14
NME1
CD109
CASP5
GSC2
KRT80
STAT6
LAMA3
SEMA3B
LSMEM2
DBNDD2
SLC35F6
UVRAG
KRT1
SMG8
TNFRSF1A
AP5S1
RAB3IP
CIDEA
NRDE2
LZTR1
SF3B3
COG4
EIF4A2
H2BW2
NOTCH3
GOLGA3
TIMM21
FBXO15
SRI
TMEM205
RAB3D
CCDC159
LTO1
ZNF436
UBC
GRAMD1A
SREK1IP1
CWC27
AGAP3
LRMDA
VCAN
PTPRF
HUS1
RNPEPL1
DUSP28
ANKMY1
GTF3C5
BRIX1
KIFC2
CYHR1
SH3GL3
ELAPOR2
COPS3
TRA2B
DPP3
FAM162A
CCDC58
NOL12
TFPT
PRPF31
BCAS1
TINAGL1
TGFBR2
TJAP1
MMP13
CCNT1
TMPRSS11A
SUSD1
NTSR2
NOP16
HIGD2A
PPP1R11
METTL1
CYP27B1
RNF39
NDUFA9
AKAP3
BCKDK
TRMT1
NACC1
KAT8
CXCL17
CBLC
SYT1
ANK3
UQCRHL
NFKBIA
HSPBP1
BRSK1
HACD2
CHRM3
IKBKB
TIMM23B
PARG
HCAR2
MRPS7
MIF4GD
GGA3
NUGGC
ELP3
STMN3
RTEL1
LSG1
CYP4X1
NPAS2
LGALS8
NUDCD3
ZGPAT
ARFRP1
NDUFB3
FAM126B
COLEC11
RALGDS
ALDH3A1
TIPARP
NIBAN2
GABRR1
OXNAD1
DPH3
TRIM48
VPS33A
CCDC174
EFR3A
CCDC185
DUSP2
ASTL
MALL
ZNF260
SART3
ISCU
SLC24A1
ANXA1
ARID3A
PRSS22
CYP24A1
NFE2
LRRC23
OR2W3
UGT1A6
PRR15
ECHDC1
TCERG1
CLDN9
CLDN6
D2HGDH
IL20
SUMF1
TANGO2
ARVCF
METTL2A
IQUB
APOBEC3H
TXN2
RWDD1
MTHFD1L
TRIM17
NR2F1
TRIM11
RPS5
PPWD1
CENPK
ITPK1
C20orf85
ALDH3B2
KALRN
MRPS10
PYDC5
IFI16
UPP1
PLA2G2A
MTA3
KCNG3
PDAP1
BUD31
CDK12
MED1
EFHD2
OR2M2
DCTN6
DDX46
ABT1
MB21D2
MUC3A
TCF24
METTL2B
EXOSC5
BCKDHA
SLX4IP
MKKS
IPO11
DIMT1
RNF40
CCDC189
NUP214
EIF1AD
CST6
BANF1
GINS1
ATP5MG
APOBEC4
RTN4IP1
QRSL1
FXYD3
PTK2
SUPT4H1
KYAT1
MAP3K7
UPK3B
LRRC8A
TRMO
PDE6D
COPS7B
CLCN5
C5orf51
PAXBP1
GFM1
SCRN2
METTL27
PLEKHH2
XAB2
STXBP2
PCP2
CLDN4
LIPK
SP6
FEM1A
GSN
INTS1
ANKK1
TNRC18
SERP2
BZW2
ANKMY2
CCDC97
STK24
PPL
AGPAT2
SLIRP
ALKBH1
PTPRB
PTP4A1
TTC31
CCDC142
PHB2
PRKAR2B
ZP3
TRIAP1
COX6A1
KRT39
ATAD2
ZNF408
ARHGAP1
PSMA1
PDE3B
AMOTL2
STEAP3
ERAP1
VAC14
NDUFS3
KBTBD4
TOMM6
PRICKLE4
FRS3
FAM180B
TRIM6-TRIM34
TRIM6
MRPS11
MRPL46
GLCCI1
RAB11FIP2
NOXO1
TMCO6
NDUFA2
IK
ZNF514
ZNF2
TSC1
GFI1B
DNAH5
FAM98B
TBL3
RPS2
RNF151
ZFHX3
LY6D
HABP2
PIM1
SCNN1A
LTBR
VPS8
CEBPA
CACTIN
GUCA2A
NCAPH2
LMF2
TMUB1
FASTK
DTX4
RARG
MB
DNAJC11
LRRC29
ZNF608
FOS
SULT2B1
MFSD10
CAV3
ZBTB20
TLL2
NPAS3
FGF1
MRPS15
CENPBD1
MRPS33
ITM2C
PHLDB2
SLC25A51
NAT1
TAF2
TRIP4
PCLAF
VGLL4
FLRT2
IRF2BP2
LDHD
FAM184A
TBCK
AIMP1
PLEKHA7
KRR1
CALML5
PDCD6IP
PTPRH
TAGLN2
EDARADD
PSG9
AAR2
CD93
FBXO11
PGK2
SLC25A11
RNF167
PFN1
ENO3
TUFT1
MBD6
DDIT3
CTSD
ATF6
IP6K3
PSME3
BECN1
SAMD10
PRPF6
MINK1
TRIM55
USP31
CCND3
TAF8
POU5F1
ZBTB46
PRKG2
CYP26B1
ALAS1
OPN1MW3
OPN1MW2
OPN1MW
DOK7
KRT86
ATP13A3
SERP1
EIF2A
TNFRSF10B
SLC2A4RG
LIME1
MAPKAPK5
BRF2
ASH2L
SCRN1
BMS1
RGS14
LMAN2
LAG3
GRK7
PTMS
PDLIM2
HIVEP2
IL1F10
TNFAIP8
IL36B
LENG9
CDC42EP5
DNAJC19
PAN2
IL23A
BNIP1
GTF2H4
VARS2
APCDD1
MCC
ANO1
NDUFB5
MRPL47
TARS2
MUC20
SPARCL1
VWCE
ALG10
ERG
TMX2
MED19
SUPV3L1
STYXL1
MDH2
ZNF17
ZNF365
INO80D
NDRG1
TARBP2
NPFF
MAP3K12
EHF
PPCDC
FSCN1
BAIAP2
NVL
CAPN14
LMNA
ANXA3
METTL6
EAF1
ZFAT
HSPB1
MAN2C1
HEXB
GPC1
NUP54
FZR1
DOHH
HERC5
WDR72
MED4
PSRC1
EPS8
CRTC1
DDX23
ABLIM1
RPS11
RPL13A
KCNAB1
ZNF385B
IGSF10
CREG1
USP30
UBQLN1
AAAS
NCBP2AS2
NCBP2
NAPRT
MROH6
TEX28
AGTPBP1
ICE1
WDR75
ABCB11
ZKSCAN4
NKAPL
ANP32A
PIKFYVE
FUCA1
SLC5A1
KDM3A
TMEM242
MCM7
AP4M1
TLE3
ADAMTSL4
MED18
MPPED2
BTNL10
ZRANB2
BTNL8
TJP1
VMO1
PSMB6
GLTPD2
EPHX1
ANKRD22
EPN3
ZBTB38
RPL26L1
SGMS2
MRPS35
ARL14EPL
GOSR1
PRKAR1A
ARL1
KIAA1217
KLHL13
ABRA
PHAX
ALDH7A1
ZNF497
A1BG
LZTS2
IRF1
SEMA3E
CCDC192
CEP162
ZC3HC1
MRPL21
IGHMBP2
PUM2
CWC25
SENP2
ZSCAN21
TENT5B
KLF9
C6orf47
BAG6
APOM
KAT6A
PHF12
WDR83OS
WDR83
MAN2B1
BAMBI
SLC52A3
RIPOR3
TBL2
CCDC88B
SLCO4A1
LASP1
CNPY2
VILL
SLC9A1
LYRM4
FARS2
SLC12A4
SLC26A11
STAM
P2RY2
ORMDL3
GSDMB
TSPAN16
UBE2L3
RPS14
PPIH
VPS52
RPS18
B3GALT4
COPS4
BCL6
MUC4
TMEM60
DLC1
PTPN14
NAMPT
FAM153B
RAE1
MTRNR2L3
ZG16B
DIABLO
NCOA3
PSMD12
SMTN
LCMT2
ADAL
EXD2
TSPAN15
PIM3
CPT1A
SNRPC
GGA1
B4GALNT3
PDC
MUC2
SOX4
ADAM18
TOR2A
RNASEH2C
KAT5
SEC13
LOC100509620
MAPKAPK3
CISH
SMG5
MAP2K3
TMEM79
LOC100129484
AP5Z1
SMYD1
TMCO2
ZMPSTE24
RBM42
PUF60
GPBP1
MDGA1
SDHC
MPZ
WASHC2A
RDH5
ITGA7
BLOC1S1
TMEM262
BCAR1
ZNF3
COPS6
PNO1
PSG1
MNT
KLF3
C12orf43
KRTAP5-6
XPNPEP3
ST13
DNAJB7
RPL23A
RAB34
PROCA1
TLCD1
NEK8
TMEM207
MRPL40
HIRA
MLLT6
DSTYK
UBOX5
FASTKD5
METTL3
SPTLC1
MYL12A