ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976678 | KYSE-410
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◣ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
ERBB2
MIEN1
GRB7
MRPL11
MTRNR2L8
MAMDC2
MTRNR2L2
MSH3
DHFR
ARID3B
ID1
SSH3
ERAL1
SLC45A4
PNMT
TCAP
IRS2
RBBP8NL
TMEM199
SEBOX
POLDIP2
TET3
TOX2
SFSWAP
TNS3
GRHL2
NAGPA
MTBP
MRPL13
SLC35B1
KIF5C
RAPGEF3
MRPL45
MTRNR2L1
RBM48
PEX1
CD300LF
MTRNR2L9
TES
C1orf174
DUX4
CRBN
ISY1-RAB43
ISY1
NECTIN4
REN
PSMD3
ANXA10
BHLHE40
C8orf33
SPINK1
TMC7
ASB2
WBP2
UNC13D
STARD3
PPP1R1B
ELFN2
OR9A4
TXNRD1
ABCC10
POLR2J3
BCL3
ANXA2
OSER1
LTBP2
GSR
PGAP3
SMN2
SMN1
VPS50
HEPACAM2
POLR2J
IDH3B
TOMM22
SCHIP1
SUPT7L
SLC4A1AP
SQSTM1
GOLM2
SERPIND1
HES1
CDKAL1
SKIL
BUB1B
CARD16
KIF25
GPATCH3
GPN2
IL1R1
SPIDR
STX16
RPTOR
RIOK2
GPRC5A
MED11
FLOT2
DHRS13
PLA2G2E
RXRA
CDKN1A
POLR3F
DZANK1
C19orf33
TRIB1
ZBTB7C
GRAMD1C
SPIRE2
ZDHHC6
VTI1A
RGPD2
RGPD1
UBE3B
KCTD10
SOCS2
SLC16A5
IER3
FLOT1
CD55
RARB
GATB
ZZZ3
EIF2D
ESRP2
GLTP
NAPB
SUPT6H
SDF2
LYPD6B
ELF3
TRIOBP
BANP
CSF3R
PSMB7
CSF3
MBNL1
EPB41L1
SLC25A45
FRMD8
DHRS3
PLD1
JMJD7-PLA2G4B
JMJD7
PLA2G4B
ANGPTL4
APOBEC3B
ATG9B
ABCB8
NOL4L
FOXJ1
LAMP1
PLAGL1
SPAG16
ZNF398
TRIM29
SAP30BP
RECQL5
SALL4
SNRPE
HAGH
FAHD1
RBBP5
SPHK2
RPL18
FAM83E
CDH18
HOOK2
JUNB
C8orf74
GRAMD2B
EPHB3
BIRC3
GET3
TAS1R1
NOL9
ATF3
CLPTM1
APOC2
TTC17
RMND5B
CSRNP1
LIMA1
GABRR1
WASHC5
NSMCE2
YAP1
RAD51AP1
C12orf4
H2BW2
CYP2A13
RASEF
TRMT2A
RANBP1
MRTO4
EMC1
TRIM16L
TPRN
TMEM203
NDOR1
EIF3H
PMEPA1
UBE2H
RDX
NDUFAB1
TMBIM1
MOCS3
DPM1
RGS3
ATP6V1G1
WSB2
SEMA3B
LSMEM2
EIF5A2
OSBPL2
ZNF585B
ZNF383
PTPRR
U2SURP
RETNLB
KMT5B
UBAP1
TCF24
DNAJC30
BUD23
MTUS1
TMEM63A
PLEKHG3
EIF3F
CD109
PLEC
MARVELD1
KRT1
THAP7
IGFL1
ERP27
GABARAP
ELP5
CTDNEP1
IRF2BPL
SYBU
NAB2
MEOX1
TSR3
GNPTG
SLC25A53
FAM199X
NKD2
ZNF789
ATP5MF-PTCD1
ATP5MF
TJP2
KLF10
OAZ3
FAIM
SF3B3
COG4
TRAF4
FAM83A
STX1A
PRKRIP1
ITPK1
CYP27C1
TFAP2C
TRAK1
PISD
RTF2
REEP4
HR
SENP1
PFKM
DOK3
DDX41
RPS26
PKP2
JRK
ITGA2
TSN
ZNF830
CCT6B
RNF213
DUS2
DPEP2NB
DDX28
RHOD
ITGB5
NGDN
POLR2J2
MMP10
RAB3IP
ZBTB7B
LENEP
DBNDD2
CLCN5
NTSR2
KALRN
KRT31
LANCL2
CXCL17
KLF6
C5orf63
TIMM23
COLEC12
E2F8
PDAP1
BUD31
WDR53
FBXO45
ZNF335
MEAK7
CXCL5
PHTF2
OPA1
CHRM3
HEXA
HUS1
NFKBIA
EMC4
SPNS1
LAT
UNKL
TRA2B
C16orf91
AXL
COMT
MUC3A
SEPTIN9
DMAC2
ERICH4
PRKAG2
CYP4X1
ZNF165
OR1F12
PTK2B
NME1
ZSCAN22
STX6
WDR86
METTL25
CCDC59
TSFM
PPP1R11
RNF39
BCKDK
KAT8
ZGPAT
ARFRP1
CDC6
SPATA25
NEURL2
CTSA
ZSWIM1
STON2
PES1
MAP3K7
ZNF436
ALDH3A1
LTO1
BRPF1
TBC1D2
ERCC1
C5orf51
MRPS7
MIF4GD
GGA3
GOLGA7B
AGAP3
VAC14
STMN3
RTEL1
SYT1
FNTA
FAM162A
CCDC58
SOX9
LRRC23
SPTLC2
TOP3A
SMCR8
RHEBL1
KMT2D
EFR3A
NUGGC
ELP3
TBC1D14
MRPS10
OXNAD1
DPH3
SUMF1
MMP13
TJAP1
REXO1
LIPK
TIMM21
FBXO15
TFPT
PRPF31
ITGB3BP
EFCAB7
RALGDS
CCDC97
HACD2
TNFAIP1
IFT20
TMEM97
SLC35F6
SMG8
STAT6
GADD45A
UXS1
KRT80
CYP24A1
ARNTL
IRF2BP2
OR2W3
PSG9
HCAR2
SCNN1A
LTBR
RNPEPL1
DUSP28
ANKMY1
FOS
TBRG4
TANGO2
ARVCF
NDST1
GTF2H3
EIF2B1
GOLGA3
MTA3
KCNG3
NRDE2
ABT1
NT5C
MALL
TMEM205
RAB3D
CCDC159
TRMT1
NACC1
SLIRP
ALKBH1
TIPARP
INTS1
TIMM23B
PARG
UVRAG
EPS8
LSG1
FAM98B
ATP13A3
RPS11
RPL13A
GSDMD
CD93
ECHDC1
SART3
ISCU
SLX4IP
MKKS
GSC2
PHLDB2
ZFHX3
TRIAP1
COX6A1
ZNF514
ZNF2
MRPS11
MRPL46
LRMDA
NOL12
LZTR1
NUP107
AAAS
PECAM1
CIDEA
FXYD3
SRI
NOTCH3
DPP3
WDSUB1
ZSCAN25
RGS14
LMAN2
GUCA2A
NIBAN2
UQCRHL
EVPLL
MB
SYNCRIP
NPAS3
ZBTB45
SLC27A5
CCNT1
SEMA5B
TINAGL1
PTPRB
URM1
BRF2
ZP3
UGT1A6
KRT39
SCRN1
RPS5
DDX23
AP5S1
IQUB
MRPS35
RIPOR3
SLC25A11
RNF167
PFN1
SUPT4H1
NFE2
ENO3
SH3GL3
TCERG1
IP6K3
ATG14
UPK3B
CENPBD1
CCDC174
TTC31
CCDC142
EIF4A2
KIFC2
CYHR1
NR2F1
NPAS2
TAF2
RTN4IP1
QRSL1
PTPRF
MED1
EEF1AKMT3
METTL1
CYP27B1
NVL
EXOSC5
BCKDHA
ALDH3B2
PDC
DOK7
FAM184A
ATF6
PDLIM2
GRAMD1A
METTL2B
SPARCL1
FUCA1
BNIP1
BRIX1
DCTN6
TRIM48
DUSP6
TMEM178B
ZRANB2
GFM1
RWDD1
MTHFD1L
CACTIN
NOP16
HIGD2A
ZMYND8
PRSS22
SSNA1
ANAPC2
OPN1MW3
OPN1MW2
OPN1MW
PHAX
ALDH7A1
PPL
USP31
SUSD1
INO80D
NOXO1
FOXO6
DUSP2
ASTL
GTF3C5
PTP4A1
ANKK1
TBL3
RPS2
RNF151
NCAPH2
LMF2
PIM1
B4GALNT3
LAMA3
DDX46
KDM2A
NDUFA9
AKAP3
NDUFB3
FAM126B
SULT2B1
SREK1IP1
CWC27
CCDC102B
VPS8
TRMO
METTL27
CLDN4
CLDN9
CLDN6
IL36B
TRIM17
TRIM11
LDLR
PAXBP1
KRR1
PLA2G2A
TMPRSS11A
CCND3
TAF8
IL20
IKBKB
ANXA1
TRMT12
BCAS1
TNFRSF1A
COLEC11
TGFBR2
MRPS33
RNF40
CCDC189
UPP1
ERAP1
GNG4
STK24
RARG
TSC1
GFI1B
METTL2A
POU5F1
STEAP3
ZCCHC4
MAPKAPK3
CISH
ZNF256
PCDH11Y
ZNF408
ARHGAP1
BNIP3L
LY6D
CEBPA
NUP214
PTK2
PTPRH
SERP2
TNFRSF10B
PLEKHH2
SLC2A4RG
LIME1
GINS1
NAT1
TLL2
ATP5MG
BMS1
FEM1A
CBLC
SLC24A1
DIABLO
PNKD
ZFP42
AAR2
APOBEC3H
PRR15
TBL2
TXN2
PSMA1
DNAJC11
PDE3B
STYXL1
HNF4A
SERP1
EIF2A
MDH2
TMCO2
PDE6D
COPS7B
ZMPSTE24
MUC20
LENG9
CDC42EP5
RPS21
MNT
FOCAD
MNAT1
PLEKHG6
FLRT2
ADAM18
COPS3
AP5Z1
SUPV3L1
SAMD10
PRPF6
NCOA3
AMOTL2
CELSR1
ALG1L
RDH5
ITGA7
BLOC1S1
CDK12
PPWD1
CENPK
TNRC18
CCDC185
CALML5
MINK1
MAPKAPK5
IL1F10
ABCB11
CYP26B1
VPS33A
CNPY2
TRIM55
NAPRT
MROH6
ANO1
CCDC88B
MRPS15
RPTN
ASH2L
MBD6
DDIT3
MFSD10
SLC12A4
ZBTB20
TMCO6
NDUFA2
IK
XAB2
STXBP2
PCP2
BTNL10
BCL9
HTN3
LMNA
PAN2
IL23A
USP30
NDUFB5
MRPL47
HEXB
TUFT1
FBXO32
NDRG1
PRKG2
SLC26A11
TACC1
NUDCD3
LDHD
UBE2L3
ZBTB38
DNAJC19
NSFL1C
ARID5B
HSPB1
TIMM22
RPS9
TSEN34
NDUFS3
KBTBD4
FAM180B
MUC4
GGA1
IRF1
ZBTB46
PLEKHA7
ANP32A
SLC5A1
AGTPBP1
KAT6A
APCDD1
KRT8
HABP2
MB21D2
C12orf43
KRT18
CELA3B
TMEM262
EFHD2
ABLIM1
VPS52
RPS18
B3GALT4
PHB2
COMMD4
HERC5
ZFPL1
CDCA5
DTX4
KLHL13
KYAT1
GSN
LRRC8A
TRIM6-TRIM34
TRIM6
FRMD7
D2HGDH
SOX4
HCAR3
UBQLN1
SLC25A51
WDR72
RAB11FIP2
MDGA1
MYL12A
SGMS2
PSRC1
LGALS8
ARID3A
SEC13
PSMD1
RPL23A
RAB34
PROCA1
TLCD1
NEK8
TARS2
IPO11
DIMT1
TLE3
GADD45GIP1
ATAD2
CASC3
SMG7
EIF1AD
CST6
BANF1
MAN2C1
ZNF3
COPS6
MRPL21
IGHMBP2
WDR75
CEP162
VGLL4
HSPBP1
BRSK1
AGPAT2
MED23
LZTS2
MCC
EIF3E
GPN1
CCDC121
HIVEP2
VIRMA
PDCD6IP
RPS12
PHF3
MUC17
SRRD
HPS4
PGK2
EXOC5
AP5M1
ART1
ZNF497
A1BG
ERI1
C7orf65
LAG3
C20orf85
PTMS
KCNAB1
JADE2
VMO1
PSMB6
GLTPD2
CTNNA3
CRTC1
ALDOA
TMEM207
MRM3
GLOD4
ERG
FZR1
DOHH
LRRC29
MAIP1
RPL7L1
DLST
PHF12
CASP5
CCDC77
KDM5A
KRTAP5-6
TSR2
EAPP
C6orf47
BAG6
APOM
TTC32
TMEM242
VILL
TMEM69
GPBP1L1
NUP54
RBX1
DLC1
PERM1
GOSR1
XPNPEP3
ST13
DNAJB7
CENPW
COPZ1
OR2G6
RNASEH2C
KAT5
LASP1
GPC1
TMEM60
MED4
GGCT
METTL3
RPEL1
CTSD
RBM19
MED18
SPINT3
ANK3
KLF3
TRMT61B
GPBP1
CHN2
CPVL
FGF1
SDHC
MPZ
NOL8
CENPP
TMEM270
MCM7
AP4M1
NEMF
BAK1
LYRM4
FARS2
REG1A
LSM5
AVL9
PCBP2
SLC44A2
NDUFA4
POLD4
ICE1
SMTN
MRPL3
PYDC5
IFI16
DDI2
ENKUR
UBE2Q1
CHRNB2
TPST2
MCCC1
RBM42
SPOCK2
FBXO11
TDRD9
ATP5MPL
ORMDL3
GSDMB
DNAH5
OBSL1
INHA
BCL6
PRKAR2B
OR2M2
FGD3
TACSTD2
CENPS-CORT
CENPS
SORL1
GABARAPL1
TMEM91
PPP1R37
PIM3
FAM133B
EDARADD
TPD52L2
ABHD16B
TFIP11
GID4
ATPAF2
TGFB1
LRRC47
ARID2
KDM3A
SH2B1
GLCCI1