ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976674 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◣ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
MTRNR2L2
MSH3
DHFR
MTRNR2L8
TMEM199
SEBOX
POLDIP2
MRPL11
MAMDC2
ERBB2
MIEN1
GRB7
ARID3B
KIF5C
PNMT
TCAP
SLC45A4
ERAL1
TES
CD300LF
IRS2
TET3
MTRNR2L1
RBBP8NL
DUX4
SFSWAP
MED11
C8orf33
MTRNR2L9
UBE3B
KCTD10
RGPD2
RGPD1
POLR3F
DZANK1
MRPL45
SSH3
PSMD3
POLR2J3
BHLHE40
PGAP3
VIRMA
RARB
CRBN
SLC35B1
GRHL2
CSF3
CDKN1A
STARD3
PPP1R1B
POLR2J
TRIM29
CLPTM1
APOC2
APOBEC3B
RDX
TXNRD1
SCHIP1
C1orf174
MMP13
RBM48
PEX1
ASB2
SPIRE2
ERCC1
POLR2J2
TSR3
GNPTG
TFPT
PRPF31
KRT31
REN
ATF3
LAMP1
ART1
MUC3A
LTBP2
TRMT1
NACC1
HAGH
FAHD1
STAT6
NECTIN4
RAD51AP1
C12orf4
FOXJ1
PSMB7
SERPIND1
ISY1-RAB43
ISY1
SUPT4H1
LZTR1
IDH3B
SPINK1
TRA2B
TMC7
TTC17
CD55
ID1
VAC14
UNC13D
ESRP2
GATB
TNS3
TSFM
U2SURP
FLOT2
DHRS13
RBBP5
UNKL
RMND5B
C16orf91
UBQLN1
TOX2
LPCAT3
GPRC5A
HES1
RRP15
TOMM22
SNRPE
MBNL1
VPS50
HEPACAM2
STX16
SALL4
IRF2BPL
PISD
RAPGEF3
CARD16
PHAX
ALDH7A1
CYP2A13
NAGPA
MTBP
MRPL13
THAP7
ABCC10
SQSTM1
NAPB
SMN2
SMN1
RASEF
JMJD7-PLA2G4B
JMJD7
PLA2G4B
MRPS11
MRPL46
ZNF576
IRGQ
SPIDR
DMAC2
ERICH4
SLIRP
ALKBH1
TBRG4
KRT80
SENP1
PFKM
SLCO4A1
NDUFB3
FAM126B
LYPD6B
OR9A4
SKIL
SOCS2
RETNLB
NUGGC
ELP3
ZNF608
SLC25A53
FAM199X
PLEKHH2
RIOK2
TMCO6
NDUFA2
IK
GFM1
SUPT6H
SDF2
ELF3
NDUFAB1
MRTO4
EMC1
ZNF585B
ZNF383
SERP1
EIF2A
SLC25A45
FRMD8
TIMM22
HEXA
PUM2
YAP1
EPHB3
DNAJC11
TRIB1
OSBPL2
CLDN9
CLDN6
PLLP
ZBTB45
SLC27A5
ELFN2
TJP2
CCDC88B
H2BW2
TTC31
CCDC142
MFSD10
DOK3
DDX41
PLEKHG3
DDX46
BTNL8
TRMO
DDX23
ZNF17
POLD4
CDKAL1
TFAP2C
SUMF1
SAP30BP
RECQL5
BRIX1
ZNF3
COPS6
TRAF4
CLCN5
RXRA
GET3
IRF2BP2
PTPRB
RECQL4
LRRC14
MFSD3
PCNP
GPT
SUPV3L1
RGS3
SSUH2
UBE2I
NPM2
WDSUB1
DHRS3
GOLM2
LSG1
NEUROD2
SUPT7L
SLC4A1AP
FOXO6
RGS14
LMAN2
GRAMD2B
ATG14
REEP4
HR
AGTPBP1
CASC3
STYXL1
MDH2
SRI
RARG
ZSCAN25
SLC16A5
CHMP7
EPB41L1
ZNF789
ATP5MF-PTCD1
ATP5MF
ZMYND8
PIM3
OSER1
DENR
PSG1
MED20
BYSL
FAIM
PRKRIP1
IL1R1
PRSS22
HUS1
GABRR1
ZZZ3
PRKAG2
PPP1R11
CHRM3
C19orf48
POLR1H
RPS26
KLF10
SPHK2
NIBAN2
RPL18
FAM83E
METTL2A
EIF3H
ATAD2
GTPBP4
WSB2
TTI1
RPRD1B
WASHC5
NSMCE2
PMEPA1
PHLDB2
MIEF1
CYP27C1
USP30
PSMD1
POMZP3
RPL26L1
SPATA25
NEURL2
CTSA
IL36B
KRR1
SPAG4
KIF25
METTL2B
ZC3HC1
TBL1X
MOCS3
DPM1
MTUS1
GNG4
RAE1
MTRNR2L3
CCDC97
ZNF865
ZNF524
FIZ1
EIF3F
TOP3A
SMCR8
AXL
PTPRR
DIABLO
ZNF579
METTL25
CCDC59
KRT1
ZGPAT
ARFRP1
SLC2A4RG
LIME1
ZSCAN22
TJAP1
STON2
NFKBIA
MEOX1
HOOK2
GLTP
SPAG16
FNTA
JUNB
SH2B1
MAIP1
HACL1
BTD
HS3ST6
MTO1
CGAS
TUFM
SNCAIP
ZNF830
CCT6B
PHF3
VPS33A
CSRNP1
ECHDC1
ATP13A3
LGALS8
ZNF514
ZNF2
DPP3
SPDYE2B
SPDYE2
UPK3BL1
SMYD1
FSCN1
BIRC3
KYAT1
LRRC8A
RNASEH2C
KAT5
DOK7
CCDC102B
ECH1
DNAJC30
BUD23
MS4A5
ZBTB7C
STMN3
RTEL1
TIMM50
HEMK1
C3orf18
RALGDS
GADD45A
PPWD1
CENPK
SCARB1
PTPRU
MRPS10
MUL1
TRIM48
ERAP1
HOXA4
HOXA3
RPS12
HOXA5
ATP6V0D1
AGRP
NGDN
PDCD6IP
MAPKAPK5
KALRN
QRICH1
RAB3IP
FAM133B
ITGB5
KLF6
UBAP1
SEC13
RPL23A
RAB34
PROCA1
RPLP0
GCN1
TLCD1
NEK8
PRR3
GNL1
TRIOBP
PSMA1
BAIAP2
PDE3B
RCE1
BCL3
ZNF335
PAXBP1
TRIP4
PCLAF
METTL27
NVL
TMEM270
ERGIC2
DLC1
TXN2
CD109
TMEM178B
THBS3
MTX1
TIPARP
TNFRSF10B
GTF2H3
EIF2B1
WDR18
TMEM262
PLA2G2E
RAD52
BNIP1
PHB2
PNO1
MBD6
DDIT3
NUP214
C8orf74
BMS1
LRRC29
C5orf63
ABCC3
ZBTB38
RWDD1
ITPKC
COQ8B
C19orf33
ZFP64
PGGT1B
SDC1
FRG2
TAS1R1
NOL9
SMG7
CXCL5
SETD3
CCNK
SPNS1
LAT
ZNF408
ARHGAP1
KLF9
LANCL2
HSPB1
GTF3C5
TCF24
COLEC11
BRF2
PLA2G2A
SYT12
FOCAD
DBNDD2
URM1
LOC102724770
DGCR6
SKIDA1
MLLT10
GSC2
CDC6
ASB6
YJU2
CDK12
MED1
AP5S1
HSPBP1
BRSK1
FCF1
AREL1
KCNIP2
PBX2
GPSM3
AGER
USP39
C2orf68
LIMA1
TRMT2A
RANBP1
EIF1AD
CST6
BANF1
GLCCI1
SYT1
C7orf65
RBM42
PPCDC
PSME3
BECN1
B4GALNT3
ANXA2
TSN
LYPLA1
SPTLC2
IQUB
LMNA
TMEM101
PRKG2
NUDT18
BCKDK
KAT8
MB
SEMA3B
LSMEM2
TACC1
MIDEAS
AMOTL2
EIF3E
HCAR2
TPD52
TRIM16L
PLEC
NKD2
BCAS1
MRPL1
MLX
HSD17B1
COASY
TBL1XR1
TMEM205
RAB3D
CCDC159
UXS1
CRTC1
DGAT2
SF3B3
COG4
RRNAD1
ISG20L2
UPK3BL2
LSM5
AVL9
SEMA4B
SPSB3
NUBP2
MRPS34
EME2
NME3
RIPOR3
PDAP1
BUD31
PLAGL1
EIF5A2
ITGA2
PUS10
PEX13
S100A2
NOTCH3
CDK5RAP2
TMEM95
KCTD11
AURKAIP1
DAZAP1
ATP6V1C1
PSMG2
CEP76
CYP4X1
MED6
PDE12
ADGRG7
WDR72
MRPS7
MIF4GD
GGA3
BUB1B
MAP3K7
VPS11
POLR3B
UTP20
MACROD1
IRX2
C5orf38
UVRAG
EXOSC5
BCKDHA
OR2M2
CLPB
PMPCA
ENTR1
C5orf51
RPS5
GPATCH3
GPN2
ADGRL1
NUDCD3
NDUFB5
MRPL47
DNAH5
WDR53
FBXO45
ZFHX3
GRK7
UQCC3
LBHD1
UBXN1
RDH5
ITGA7
BLOC1S1
STX1A
TTC32
BCAR1
FAM162A
CCDC58
MRPL21
IGHMBP2
FIS1
CLDN15
ZBTB7B
LENEP
MYL12A
FEM1A
MARVELD1
LOC100509620
ANXA3
MYL12B
FOXA2
IER3
FLOT1
BIRC2
COL9A3
ITGA3
ZNF165
OR1F12
TMEM63A
STX6
EPB41
FOXS1
MRPS22
TNFRSF12A
THOC6
HCFC1R1
OPN1MW3
OPN1MW2
OPN1MW
DHX35
HNF4A
LDHD
MUC20
AQP6
AQP5
MED4
PIM1
CDH1
MUC2
GSR
NOXO1
GRAMD1C
OAZ3
PPL
TBL3
RPS2
RNF151
GPC1
TARS2
TCERG1
APOBEC4
NME1
ATG9B
ABCB8
RINT1
PUS7
CDC23
FRMD7
NDST1
RARA
PPP1R37
PES1
KLK6
DOT1L
CDK5RAP1
TMEM123
MRPS26
GNRH2
GRAMD1A
CNPY2
TMEM207
KCNJ14
GRWD1
RPL30
UPP1
TBL2
SSNA1
ANAPC2
NOL4L
BANP
CPA1
TUBG2
SLX4IP
MKKS
POM121L12
PWP1
RHEBL1
ZCCHC4
ZNF436
KMT2D
TAGLN2
ZRANB2
MMP10
MALL
MAD2L1BP
GTPBP2
YIPF3
POLR1C
LRRC73
TMCO1
CYP26B1
SNRPB
EAPP
SETD1A
ORAI3
TPST2
EVPLL
PHF5A
ACO2
PRKAR2B
KMT2A
LRFN4
VWA7
LNX1
TSC1
GFI1B
RPTN
CDK11B
CDK11A
ARHGAP30
PHRF1
RTF2
MEAK7
BNIP3L
NAB2
SNRPB2
ZNF703
CD63
PPP1R13B
SEPTIN9
MRPS15
AAAS
RPL7L1
TBC1D17
PNKP
AKT1S1
OR6B2
NDUFA10
WASHC1
EIF2S1
ATP6V1D
INTS1
PDE6D
COPS7B
MIDN
ANAPC5
ANKK1
MCC
TEKT2
ADPRS
PTPN2
MDGA1
SOX4
GTF3C3
C2orf66
KYNU
ZNF696
IPO11
DIMT1
CAPN14
PIK3C2B
PRKCD
KCNAB1
DNAI2
SLC25A11
RNF167
PFN1
GP1BA
ENO3
RP1L1
MICAL2
TLL2
STK24
TXNL4B
DHX38
PEPD
IL16
RARS1
PTK2
FAM83A
TIMM23
SH3GL3
PNKD
SEMA3F
PTPRF
TPRN
TMEM203
NDOR1
KMT5C
RAB40C
CASP5
PPIL3
NIF3L1
KCNK15
METTL21A
COG2
CCNT1
NCBP2AS2
NCBP2
LTO1
RPS14
DUS2
DPEP2NB
DDX28
UQCRQ
LEAP2
GDF9
DDX49
COPE
CTTN
TRIM4
DYNC2I2
SBNO1
GSN
ANXA1
ZNF398
LGALS7B
DNTTIP2
RBX1
HDAC7
NPAS1
TMBIM1
HTRA2
DQX1
ISG20
SLC7A6OS
PRMT7
TLR5
PLXNB2
CLDN4
MINK1
TNFRSF1A
SPTBN2
C11orf86
COX16
ONECUT3
ASH2L
NOP53
MTHFR
CLCN6
SART3
ISCU
CSTF1
AURKA
CORO1C
TMEM41A
IL1F10
PFDN1
SEMA6A
ECHDC3
LRRC23
VSIR
PCID2
CUL4A
TAF6
MBLAC1
CNPY4
WDR46
RGL2
PFDN6
FAM153B
RALYL
AP5Z1
EEF1AKMT3
SCRN2
OSBPL7
LRRC46
METTL1
CYP27B1
MED23
WDR97
MAF1
CYC1
COPS8
RPS21
UBTFL1
PSMD5
HSPA9
PTP4A1
PTPN12
MRPL40
HIRA
ACP3
TPRKB
SPRED2
MAN2C1
GNA13
TPD52L2
ABHD16B
CWC25
OR2W3
PSMC3
LY6D
ZFPM1
OR2T1
MAGOH
LY6E
ADPGK
ZMAT2
HARS2
HARS1
PCDH11Y
SLC6A2
MRPL48
SSTR5
SPAG9
STK36
RNF25
LIF
UBE2H
TGIF1
EFHD2
FADD
NUDT5
CDC123
MUC17
SRP68
KRT17
ZACN
GALR2
MGAM
LGR6
KPTN
IRF6
VCAN
ZNF16
GUCA2B
FURIN
PTAFR
SRD5A1
NSUN2
ZBED9
CASTOR1
LONRF3
SSBP1
RHOD
GUCA2A
CDH18
MCM7
AP4M1
SIGLEC15
C6orf226
JADE2
TRMT112
PRDX5