ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976672 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◣ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
ERBB2
MTRNR2L8
MTRNR2L2
MSH3
DHFR
TES
MIEN1
GRB7
MRPL11
MAMDC2
ARID3B
KIF5C
TMEM199
SEBOX
POLDIP2
CRBN
MTRNR2L1
ERAL1
TOMM22
PNMT
TCAP
GRHL2
RGPD2
RGPD1
POLR2J3
CD300LF
DUX4
UBE3B
KCTD10
TXNRD1
STARD3
PPP1R1B
SFSWAP
STAT6
MRPL45
IRS2
ELF3
PGAP3
PSMD3
GET3
MTBP
MRPL13
UNC13D
MTRNR2L9
SSH3
ISY1-RAB43
ISY1
TRA2B
RBM48
PEX1
SLC45A4
TSR3
GNPTG
RBBP8NL
ERAP1
TRIM29
TET3
VPS50
HEPACAM2
ESRP2
SPAG16
MED11
HEXA
CARD16
SCHIP1
LZTR1
HES1
LYPD6B
SEMA3B
LSMEM2
GFM1
GPRC5A
BCKDK
KAT8
POLR2J2
TJAP1
NOL4L
CD55
POLR2J
ART1
BHLHE40
TXN2
CYP2A13
SOCS2
YAP1
SLIRP
ALKBH1
UBE2I
IL1R1
LAMP1
PDAP1
BUD31
SUPT7L
SLC4A1AP
C1orf174
TMC7
TOP3A
SMCR8
APOBEC3B
SUPT6H
SDF2
FNTA
LTBP2
MRPS15
MOCS3
DPM1
CSF3
SRI
AXL
DMAC2
ERICH4
GRAMD1C
RXRA
ZNF789
ATP5MF-PTCD1
ATP5MF
NAGPA
PSMD1
TRIB1
GNG4
SAP30BP
RECQL5
RPTOR
UPK3B
SPIRE2
MRTO4
EMC1
ID1
GLTP
MED6
OSBPL2
SPIDR
LRRC47
THAP7
SLC25A45
FRMD8
KRT31
RPL23A
RAB34
PROCA1
TLCD1
NEK8
ERCC1
SLC35B1
C8orf33
CCDC97
STX16
GSR
ZNF335
DDX23
TNS3
TRMT2A
RANBP1
PHAX
ALDH7A1
ATG9B
ABCB8
SPATA25
NEURL2
CTSA
ZSWIM1
PTK2
ELFN2
C19orf33
TAS1R1
NOL9
EIF3H
IDH3B
RBBP5
SALL4
SUPT4H1
TRIM48
MB
KRT1
UVRAG
SUMF1
TJP2
CSRNP1
EXOSC5
BCKDHA
NGDN
ATG14
TRAF4
ZNF585B
ZNF383
RTF2
KLF6
APMAP
NCBP2AS2
NCBP2
NUGGC
ELP3
DNAJC11
PALB2
DCTN5
POLR3F
DZANK1
FOXJ1
SPINK1
FZR1
DOHH
RHOD
ECHDC1
HS3ST6
PPWD1
CENPK
UBQLN1
DUSP2
ASTL
TSFM
MMP13
EEF1AKMT3
ZNF830
CCT6B
ANGPTL4
RMND5B
ZNF408
ARHGAP1
NECTIN4
TMEM258
FEN1
CYP27C1
PSMG2
CEP76
FAM162A
CCDC58
RARB
LRRC29
NOL8
CENPP
LTO1
SLCO4A1
SCRN2
OSBPL7
LRRC46
RCE1
ZZZ3
NKD2
TLE3
HAGH
FAHD1
IRF2BPL
MAN2C1
UNKL
C16orf91
C8orf74
C5orf51
KMT5B
NOM1
ZBTB7C
DDX46
ZGPAT
ARFRP1
MUC20
SEPTIN9
CDKAL1
JMJD7-PLA2G4B
JMJD7
PLA2G4B
ZNF608
PSMB7
TMCO6
NDUFA2
IK
HNF4A
SAMD10
PRPF6
KALRN
CDKN1A
BCAS1
SART3
ISCU
TCTEX1D4
PLK3
BTBD19
INO80D
STYXL1
LDHD
MDH2
PLA2G2A
RPS26
SENP1
PFKM
SENP5
SPNS1
LAT
RIOK2
YJU2
RDH5
ITGA7
BLOC1S1
SLC25A53
FAM199X
ZNF165
OR1F12
TATDN3
NSL1
SLC2A8
SEC61B
MEOX1
SMN2
SMN1
RARG
SUPV3L1
TBRG4
DIABLO
LIPK
WASHC5
NSMCE2
U2SURP
ZNF514
ZNF2
VPS52
RPS18
B3GALT4
SPARCL1
UBE2M
CHMP2A
TXNL4B
DHX38
SQSTM1
NVL
SPINT3
MUC3A
CASC3
RPS5
C5orf63
TPRN
TMEM203
NDOR1
BRMS1
RIN1
UBAP1
CENPBD1
MDH1B
FASTKD2
GADD45A
PRKRIP1
TRMO
RAE1
MTRNR2L3
ZNF576
IRGQ
TPST2
BRWD1
BRPF1
IZUMO1
FUT1
FGF21
RAD9A
PPP1CA
ZSCAN25
TMEM40
DPP3
PRKCD
PFDN1
SNRPE
VIRMA
APOBEC3H
SLC39A9
ERH
REN
MYBL2
METTL2A
LURAP1L
ZNF17
NDUFA9
AKAP3
MRPL58
BABAM1
TFPT
PRPF31
PSME3
BECN1
TIMM23
GSN
TRIQK
BCL3
BIRC3
CCDC174
NCAPH2
LMF2
ANXA10
REXO1
DERL1
SEMA5B
REEP4
HR
OAZ3
TRUB2
COQ4
SF3B3
COG4
POLD1
NR1H2
ATP6V0D2
CEP162
NUP107
OSER1
WSB2
TMEM63A
STX1A
EPS8
OXNAD1
DPH3
CARD18
ANXA2
KIF25
EPHB3
MAP3K7
NOTCH3
PTP4A1
SLPI
TOX2
HUS1
PPP1R11
RAB3IP
RNF39
SERPIND1
RAPGEF3
RDX
GRAMD2B
FAIM
SETD1A
ORAI3
ASB2
ZSCAN22
MAIP1
WDR53
FBXO45
MED23
THUMPD1
PPIL4
SMYD1
GFM2
MRPL53
MOGS
CCDC124
PLEKHN1
NOC2L
KLHL17
ARMC1
METTL25
CCDC59
KLF9
GPATCH3
GPN2
CXCL5
CPSF1
EDARADD
ZFP42
SLC39A4
NUP214
MRPS7
MIF4GD
GGA3
TRMT1
NACC1
DGAT2
RRNAD1
ISG20L2
CCDC102B
LGALS8
OR9A4
CPA1
TSN
BCL9
SKIL
STMN3
RTEL1
WDR24
STUB1
JMJD8
SF3A3
VGLL4
FAM222B
CBLL1
ATP1A2
NOL10
MPPED1
VAC14
BMS1
MTUS1
SMIM41
ATG101
PUM2
GTPBP4
RPL26L1
SETD1B
RHOF
LIMA1
CCNT1
LRFN4
DNAH5
ZNF436
C20orf85
NTSR2
NOL11
SMPD4
MZT2B
NIBAN2
ABT1
LAMTOR1
ANAPC15
DDX49
COPE
UPP1
NAPB
FOS
CDC6
SCARB1
NUP85
UBIAD1
ENOSF1
SEC13
GRAMD1A
GOLGA7B
ITGA2
MAPKAPK5
ERGIC2
C16orf74
DNAJC30
BUD23
PPP1R37
RWDD1
ATF1
CLPTM1
APOC2
FAM83A
CLDN4
HOOK2
JUNB
ZG16B
COMMD2
MESP1
AMN1
CNKSR3
FLOT2
DHRS13
PRSS22
RNF213
FOXS1
GATB
EIF2D
TTC17
RPLP0
GCN1
AGPAT2
AGAP3
SCARF2
ABHD11
MRPL3
TRIM65
MRPL38
TMUB1
FASTK
PLEC
CNPY2
BCL9L
GPD1L
TCF3
MAFK
UQCRQ
LEAP2
GDF9
ZNF461
CDK12
CCDC88B
PTPRR
NDUFB5
MRPL47
TUFT1
COLEC11
ALKBH3
SLC25A10
MRPL12
PSKH1
NRN1L
AP5Z1
RNPEPL1
DUSP28
ANKMY1
SART1
FBXW2
CD36
ABCC10
TRIP4
PCLAF
KMT5C
NBEAL2
CCDC12
TPD52L2
ABHD16B
PDC
LPCAT2
CDKN2AIPNL
NDUFS7
TCF24
PHB2
HTRA2
DQX1
ICE1
CZIB
MFN2
H2BW2
TNFRSF10B
PSG9
ITGB5
KRR1
KYAT1
ZCCHC4
PLEKHH2
LRRC8A
MRPL21
IGHMBP2
APCDD1
IRF6
TM4SF4
PSMD7
TIMM22
FADD
ZFYVE26
RAD51B
PDRG1
DOK7
SMG8
XAB2
STXBP2
PCP2
PRR3
GNL1
TOMM6
PRICKLE4
FRS3
C7orf65
PPFIA1
OSCAR
NDUFA3
EPB41L1
NFKBIA
OBSL1
GTF2H3
EIF2B1
INHA
FBXO32
SETD3
CCNK
CDK11B
CDK11A
COPS8
VPS33A
ZBTB45
SLC27A5
PLD1
GSC2
PNO1
WDR97
MAF1
CYC1
MAD2L1BP
GTPBP2
CGGBP1
C3orf38
TM4SF1
RSPH9
LRRFIP2
BIRC2
DOK3
DDX41
GTF2IRD2
WNT7B
PEPD
GTF2IRD2B
IL1RN
CMIP
ZNF507
PUS10
PEX13
NAB2
KAT6A
SLC7A6OS
PRMT7
SMIM12
TMED2
TFAP2C
NT5C
PCYT1A
ZNF256
EPPK1
SRP9
TRIM16L
EIF2S1
ATP6V1D
KLK6
SLC39A2
METTL17
NOP58
DHRS3
MRPS11
MRPL46
INTS1
CYP24A1
SNRPC
SNRNP200
AGTPBP1
COX16
BIN3
GOLM2
PMEPA1
NDST1
DUSP6
RGS14
LMAN2
MEAK7
KYNU
PSG1
D2HGDH
SLC24A1
ZFAT
PTPRB
GPC1
TTI1
RPRD1B
TMEM123
KRTAP5-6
ZFP62
RALGDS
RGS3
PIM3
BCAR1
TRIOBP
ARID2
PLEKHG3
POLD4
ATF3
RGS20
ATP6V1H
TUBG2
FAM187A
EFTUD2
CCDC103
TUBD1
RPS6KB1
CD63
LRATD2
METTL27
TMEM270
TCERG1
PSG5
PISD
CACTIN
PLXNB2
PDE6D
COPS7B
SUGCT
MPLKIP
STK24
PEX26
BANP
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
VEGFA
TAGLN2
NUS1
DIDO1
C5orf15
GID8
SERPINH1
IER3
FLOT1
TIMM23B
PARG
MYLIP
NDUFAF5
ESF1
FASN
MAGOH
MDM4
PARP4
RARS1
CDK5RAP2
PMPCB
TMEM207
PIK3C2B
SRP68
ZACN
GALR2
GJB5
GJB4
SAMM50
TBL1X
TANGO2
ARVCF
CLDN24
CLDN22
MCM7
AP4M1
KRT17
UBL5
ZNF655
FAM200A
FBXL12
RAD51AP1
C12orf4
GOSR2
FOSB
CLCF1
GTF3C5
CSTF1
AURKA
TPGS1
TRIM4
GJC3
CASP8
ECH1
TFIP11
ZNF142
BCS1L
EIF2B2
RRP36
MEA1
COL9A3
PRCC
CTNNBL1
EIF1AD
CST6
BANF1
HOXA4
HOXA3
HOXA5
SRD5A1
NSUN2
RBM22
TMEM147
FSCN1
BBS1
YIPF3
POLR1C
LRRC73
TBL2
ZNF865
ZNF524
FIZ1
UQCRHL
SSNA1
ANAPC2
TEKT2
ADPRS
NPAS2
KIAA0895L
EXOC3L1
E2F4
ELMO3
COA8
BAG5
S100A11
EFHD2
PSAP
DGCR6L
NMNAT1
LZIC
METTL21A
INKA2
DDX20
SH2B1
MRPL1
RAMAC
MORF4L1
ALDH3B2
PAN2
IL23A
GABARAP
PDXK
PHF23
DVL2
ALDH18A1
HNRNPA2B1
CBX3
SLC39A10
GET4
ELP5
CTDNEP1
WDTC1
EPC2
DDX17
EIF4G2
STRBP
NUDT3
SLC25A25
NAIF1
WASHC2A
SEPTIN7
RNASEH2C
KAT5
WASF2
FRG2C
WASHC2C
UBE2Q1
CHRNB2
TSPAN31
MARCHF9
KCNK4
GPR137
CDK4
BAD
LOC102724770
DGCR6
GSK3B
ATP6V0D1
AGRP
RSF1
AAMDC
MSMO1
DAGLA
RPGRIP1L
FTO
ARL4D
MDM2
PTPRF
RPS6KC1
FAM72D
FAM72C
RPUSD4
FAM118B
MTHFR
CLCN6
WBP2
PMF1-BGLAP
PMF1
ZBTB7B
LENEP
CCDC200
EFNA3
SYNGAP1
PHF1
CUTA
LY6L
CLCN7
SMARCD2
USP49
DDX42
CCDC47
SRSF1
ILF3
SERPINI1
PDCD10
PRR5L
COMMD9
GBA
UBE2H
SPTAN1
ATP6V1G1
UAP1L1
MAN1B1
MACC1
FRG2
ATG16L2
RHOBTB2
INO80C
PIP4P1
OSGEP
APEX1
SLC35A5
ATG3
IRF2BP2
ATAD2
AVEN
OPN1MW3
OPN1MW2
OPN1MW
PGLYRP4
FANCA
EN2
AURKAIP1
SKIDA1
EAPP
ZNF358
MCOLN1
PPCDC
RIPOR3
WDR74
STX5
PDE4DIP
PDGFB
NOXO1
FCGR1A
PCIF1
SLC25A11
RNF167
PFN1
PURB
FXYD3
MYCL
PHRF1
DAZAP1
XPO7